BAC Information

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BAC

Clone NameB6Ng01-204L13
Chromosome10 (Build37)
Map Location 15,528,150 - 15,529,227
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666917, LOC637043, LOC100039492, LOC671439
Downstream geneLOC382457, LOC546472, LOC100039576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204L13.bB6Ng01-204L13.g
ACCGA024588GA024589
length1,1761,087
definitionB6Ng01-204L13.b B6Ng01-204L13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaagaaactgtgaatgaaatccacaagccagttctacaggtgt
ttgaatcaaaaaggcagaagcagctctagtggctttaccaaccaaatcat
tgccctctgctaaagggccaggcaagcctgtatgagctcgaatgtggtgg
acaaaaaatggagaacttagaattaaggattgcaatttatttaacaaata
ccctatagtggatcgaaaactcaccttccccacagcttccagcactgcta
atgaattaaccacataccgactatctgaaattaaattaaacgattcagaa
tacaattcaaaaacttttataacaatgtgcaactcaataacttgggaaaa
gcagggggaaactgtaaagttactggtgtggagccatggaccaaatatgc
tcctcagactgtcttagacccatctgtaaaaattaaaggggcatctggca
atggcactcaagaagtaattcatggaaaaacaactggatgagcattaatc
agctgcaaaatgggatccttagggaaatgattatccatctttcccataaa
gctatatctcaaaattgcccaatcatcaacagtagctgataatacttcta
tttgcttcatattatatggaacaatcaattcctgagggggattgccaaaa
tattgaatacattgttgtaggccaatcaaggccaattgtgctaccgaggc
agggtaataagacaagatttttgcaggtgaaatcttgaggtgtatccata
gcaaaggggagccctgccagaggactccagtaggctgggtctccgagggt
aggatgcacaaaataataggactgaacagatctcttctctttaatgctgc
tgtttgaatacccttttcgactaaacttaatgctacgcaggcagaatcag
taagctgccgggtaaaatttaattctatatatccttggtaaaatatcata
taatggttgtacttatttgctgggttagaccaatagggacgtacccactg
tatattccccaatagcttttgaaatcattcaatgtcctcaattatcgtcc
gatctgaaatttttctggggaatacttgactatcaaaattttgttctaaa
ttagtcacacatttgcgttctgaacctttccaaggctacaacccattggc
cttttctcttctaaatattttgtcga

gaattcttcagtctgttattctcgtcagcatggccatctctgtgttaaac
actatctaccaaaaaataaacaataaaaaataaaataaaaatctcagatc
agagtcaagagaggcactgattatgagtataacgataagtcattaggaac
tgatttaacattatattcattaagcagcacaatagtgtttagttttttct
agggctttggagtcataaggtttgggctgataatggtgacatttaggtgt
ttaatcttgtgaagccacaatcagaaagttgttggttattcccagtgatg
ttcttgccactactgcagtagtgagcttagcttgccagacccatcattgt
ttatcttataagaattgaccactgtgtatgactgttgattgcttttctgc
tttggaagcaggcaaaacactttgtagcattatgaaagcttcctagtagg
aatgaagttagaactttgtgggttaaatatcatagaaaagctctatatag
gaataacaatacatttccctttatttatactcagaaatactcaaactttt
gctaatgattataaatactatttgtgttgttttgaatagttgttcatttg
agacaggctctctctatgtaaactaaactagtcacaaactcatgacagac
aagtagatcaatggaatagaattgaagatccagaaataaacccacatacc
tatggtcactttggtctttgacaaaagaattaaaaccatccactgaaaaa
agacagcattttcaacaaatggtcctggctcaactggtggttatcatgta
gaagaatgtgaattgattctttatctccttgtacaaagatcgattctaag
tggaccaatggcctccacataaaaacagagacactaaaacttattagagg
agaaagtgggaaaaagcctcgaagatatgggcacaggggaaaaagtcctg
aacacaacagccattgggtttgtgctgtaagatggagaattgaacaaata
gggacctcataaaatttgcatagctcctgcaaaggcaaaaagaaactctc
atagactaaaaaggtcattccacagttgggaaagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15528150_15529227
seq2: B6Ng01-204L13.g_69_1155

seq1  GAATTCTTCAGTCTGTTATTCTCGTCAGCATGGCCATCTCTGTGTTAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGTCTGTTATTCTCGTCAGCATGGCCATCTCTGTGTTAAAC  50

seq1  ACTATCTACCAAAAAATAAACAATAAAAAATAAAATAAAAATCTCAGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTACCAAAAAATAAACAATAAAAAATAAAATAAAAATCTCAGATC  100

seq1  AGAGTCAAGAGAGGCACTGATTATGAGTATAACGATAAGTCATTAGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAAGAGAGGCACTGATTATGAGTATAACGATAAGTCATTAGGAAC  150

seq1  TGATTTAACATTATATTCATTAAGCAGCACAATAGTGTTTAGTTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAACATTATATTCATTAAGCAGCACAATAGTGTTTAGTTTTTTCT  200

seq1  AGGGCTTTGGAGTCATAAGGTTTGGGCTGATAATGGTGACATTTAGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTTGGAGTCATAAGGTTTGGGCTGATAATGGTGACATTTAGGTGT  250

seq1  TTAATCTTGTGAAGCCACAATCAGAAAGTTGTTGGTTATTCCCAGTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTTGTGAAGCCACAATCAGAAAGTTGTTGGTTATTCCCAGTGATG  300

seq1  TTCTTGCCACTACTGCAGTAGTGAGCTTAGCTTGCCAGACCCATCATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCCACTACTGCAGTAGTGAGCTTAGCTTGCCAGACCCATCATTGT  350

seq1  TTATCTTATAAGAATTGACCACTGTGTATGACTGTTGATTGCTTTTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTATAAGAATTGACCACTGTGTATGACTGTTGATTGCTTTTCTGC  400

seq1  TTTGGAAGCAGGCAAAACACTTTGTAGCATTATGAAAGCTTCCTAGTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGCAGGCAAAACACTTTGTAGCATTATGAAAGCTTCCTAGTAGG  450

seq1  AATGAAGTTAGAACTTTGTGGGTTAAATATCATAGAAAAGCTCTATATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTTAGAACTTTGTGGGTTAAATATCATAGAAAAGCTCTATATAG  500

seq1  GAATAACAATACATTTCCCTTTATTTATACTCAGAAATACTCAAACTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACAATACATTTCCCTTTATTTATACTCAGAAATACTCAAACTTTT  550

seq1  GCTAATGATTATAAATACTATTTGTGTTGTTTTGAATAGTTGTTCATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGATTATAAATACTATTTGTGTTGTTTTGAATAGTTGTTCATTTG  600

seq1  AGACAGGCTCTCTCTATGTAAACTAAACTAGTCACAAACTCATGACAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGCTCTCTCTATGTAAACTAAACTAGTCACAAACTCATGACAGAC  650

seq1  AAGTAGATCAATGGAATAGAATTGAAGATCCAGAAATAAACCCACATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGATCAATGGAATAGAATTGAAGATCCAGAAATAAACCCACATACC  700

seq1  TATGGTCAC-TTGGTCTTTGACAAAAGAATTAAAACCATCCACTGAAAAA  749
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCACTTTGGTCTTTGACAAAAGAATTAAAACCATCCACTGAAAAA  750

seq1  AGACAGCATTTTCAACAAATGGTCCTGGCTCAACTGGTGGTTATCATGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCATTTTCAACAAATGGTCCTGGCTCAACTGGTGGTTATCATGTA  800

seq1  GAAGAATGTGAATTGATTC-TTATCTCCTTGTACAAAGATCGATTCTAAG  848
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAAGAATGTGAATTGATTCTTTATCTCCTTGTACAAAGATCGATTCTAAG  850

seq1  TGGACCAATGGCCTCCACATAAAAACAGAGACACTAAAACTTA-TAGAGG  897
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGACCAATGGCCTCCACATAAAAACAGAGACACTAAAACTTATTAGAGG  900

seq1  AGAAAGTGGGAAAAAGCCTCGAAGATATGGGCACAGGGGAAAAAGTCCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTGGGAAAAAGCCTCGAAGATATGGGCACAGGGGAAAAAGTCCTG  950

seq1  AACACAACAGCAAT--GGTTTGTGCTGTAAGATTGAGAATTG-ACAAATA  994
      ||||||||||| ||  ||||||||||||||||| |||||||| |||||||
seq2  AACACAACAGCCATTGGGTTTGTGCTGTAAGATGGAGAATTGAACAAATA  1000

seq1  -GGACCTCATAAAA-TTGCATAGCTCCTGC-AAGGC-AAAAGAAACTCTC  1040
       ||||||||||||| ||||||||||||||| ||||| |||||||||||||
seq2  GGGACCTCATAAAATTTGCATAGCTCCTGCAAAGGCAAAAAGAAACTCTC  1050

seq1  AATAAGAC-AAAAAGGTCA-TCCACAGTTTGGGAAAGCAT  1078
      |   |||| |||||||||| ||||||| ||||||||||||
seq2  A--TAGACTAAAAAGGTCATTCCACAG-TTGGGAAAGCAT  1087


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