BAC Information

Click to search

BAC

Clone NameB6Ng01-205F22
Chromosome10 (Build37)
Map Location 129,442,421 - 129,577,972
singlet/doubletdoublet
Overlap geneOlfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405
Upstream geneOlfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203
Downstream geneOlfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205F22.bB6Ng01-205F22.g
ACCGA025069GA025070
length1,137819
definitionB6Ng01-205F22.b B6Ng01-205F22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,576,844 - 129,577,972)(129,442,421 - 129,443,072)
sequence
gaattccacacccctaagctccttaccccataaaaacccctagctttcga
gcctcatggccgacatccgttatctcccgtgtgggatgcacgtcggtctg
gagctccgtaattaaacgacctcatgtaattatatcaaggcgttctgttc
tgttcgtgattcttgggtgaaagccgaattgggaatggagtgggggtttc
cctgataggtctatcactgtaacggctgggcagttggaagccttcctgga
atgaccaagttaaaggtaaacttccctgactctgggtttcacctggaaga
gcctttgtttctggcctccccttcatcggtaaggagctggaggcagatgc
catgtgcaatttcttcacgtctcttcttgccactgtttctagcttggtct
ctggcttggaatgatcatgttctcctttggactggaaaaagaagtgtcgt
agtgcctccagaagttggtgactgggaagctgctggccgaccatggatgg
cctcagccgggaatgagtttcaagggcccactgcagttggggaagctttt
cctctgctgctctgcctagctttgtcacagattgtgagtctcagataaat
cttgcagccttccttcgtggaacagtcctctgctgcacaccactaccctc
aggcatgagttcttgagaattcgggagttgtttttggtgttgcacatggc
ccagctgctcaggtggcactgtgcgttcaggtcgtccgagcggtaaatgt
gtttcactgtagtctggtcactccaggaaccagtcaatctttttcacatt
ctgaggcagtttcatgtcgttaatatcccagctcagtatctctttgtctt
taggatcaaagttgtccagttccacgataaggttggctttaacacaggct
cttctccactcaaattgtcagagatgtctagagagctccaagtctcagaa
ctctgttccacaaagcagctgaagggcttatttttcaaagctttccactt
cagtgctcctgagtcccttctttctcacttcttgtccaggtgttcataca
gtgtcagctctggaatccaggttcctgtcaagtttctgttcacttctagg
agggtggtgggttacactatatgttaatgacctctgg
gaattcagtaggaattcagcaaggaagttacctattcagtaactaattaa
gcattacaaaagacggagccaacagctcagggctggtctgcaaaatgttt
actaggactataaggacactcttaaccaaataagggtttaccatgagaaa
agttagggaatcccactgagacaggtttcttcactaggcccaaagaattc
aggcagaactatagaacataaataaattttatgcctcagtccaacctttc
ttcttaataacagggaggagatgtagcctctcacaagcctgaagcaggct
gagccagaccttgactttgttgtcactaaggagattacgtagggtggagc
ctacctccctggatcactctactgttcagcctctgctactgctgctacct
gctgggagtcagcctagctattcggagtctacatccaatcctacatgtgg
tcacctgtagctgggctccaaggatgatttggcaggaatgggcttcccct
ctcctttataaaacgtgtccgccattaaaaatttgaaccttgagcagact
agttgccttggttccattatctctcaacccacctagattccctcttctct
tccagttccaagatgccttccaggctcgaacccggacatgagagccgcag
gccagtcccaacagttatctaactacttatggcatggggcttctcctgaa
gaatggttgatgtaaatttaaatttaggcatagtttgttttgttcaggca
ctttttgtctcatatttcttttgtttttgtttttgtctgagggagggaag
gaataagggggagagataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129576844_129577972
seq2: B6Ng01-205F22.b_44_1180 (reverse)

seq1  CCAGA-GTCATTAAC--ATAGTGTAA-CCAC--ACCTCCTAGAAGTGAAC  44
      ||||| |||||||||  ||||||||| ||||   ||||||||||||||||
seq2  CCAGAGGTCATTAACATATAGTGTAACCCACCACCCTCCTAGAAGTGAAC  50

seq1  AG-AACTTGGCAGG-ACCTG--ATCCAGAGCTGACACTTGTATG-ACACC  89
      || |||||| |||| |||||   |||||||||||||| |||||| |||||
seq2  AGAAACTTGACAGGAACCTGGATTCCAGAGCTGACAC-TGTATGAACACC  99

seq1  TGGACAAGAAGTTGGAGAAAGAA-GGACTCAGGAGCACTGAAGGTGGAAA  138
      ||||||||||||  ||||||||| |||||||||||||||||| |||||||
seq2  TGGACAAGAAGT--GAGAAAGAAGGGACTCAGGAGCACTGAA-GTGGAAA  146

seq1  GGCTTTGAAAAATAAGCCCTTCAGCTGCTTTTGTGG-ACAGAGTTCTGAG  187
       ||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  -GCTTTGAAAAATAAGCCCTTCAGCTGC-TTTGTGGAACAGAGTTCTGAG  194

seq1  ACTTGGAGCTCTCTAGACATCTCTGACAATTTGAGTGGAGAAGAGCCTGT  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAGCTCTCTAGACATCTCTGACAATTTGAGTGGAGAAGAGCCTGT  244

seq1  GTT-AAGCCAACCTTATCGTGGAACTGGACAACTTTGATCCTAAAGACAA  286
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGCCAACCTTATCGTGGAACTGGACAACTTTGATCCTAAAGACAA  294

seq1  AGAGATACTGAGCTGGGATATTAACGACATGAAACTGCCTCAGAATGTGA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATACTGAGCTGGGATATTAACGACATGAAACTGCCTCAGAATGTGA  344

seq1  AAAAGATTGACTGGTTCCTGGAGTGACCAGACTACAGTGAAACACATTTA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTGACTGGTTCCTGGAGTGACCAGACTACAGTGAAACACATTTA  394

seq1  CCGCTCGGACGACCTGAACGCACAGTGCCACCTGAGCAGCTGGGCCATGT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCGGACGACCTGAACGCACAGTGCCACCTGAGCAGCTGGGCCATGT  444

seq1  GCAACACCAAAAACAACTCCCGAATTCTCAAGAACTCATGCCTGAGGGTA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACCAAAAACAACTCCCGAATTCTCAAGAACTCATGCCTGAGGGTA  494

seq1  GTGGTGTGCAGCAGAGGACTGTTCCACGAAGGAAGGCTGCAAGATTTATC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGCAGCAGAGGACTGTTCCACGAAGGAAGGCTGCAAGATTTATC  544

seq1  TGAGACTCACAATCTGTGACAAAGCTAGGCAGAGCAGCAGAGGAAAAGCT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTCACAATCTGTGACAAAGCTAGGCAGAGCAGCAGAGGAAAAGCT  594

seq1  TCCCCAACTGCAGTGGGCCCTTGAAACTCATTCCCGGCTGAGGCCATCCA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAACTGCAGTGGGCCCTTGAAACTCATTCCCGGCTGAGGCCATCCA  644

seq1  TGGTCGGCCAGCAGCTTCCCAGTCACCAACTTCTGGAGGCACTACGACAC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGGCCAGCAGCTTCCCAGTCACCAACTTCTGGAGGCACTACGACAC  694

seq1  TTCTTTTTCCAGTCCAAAGGAGAACATGATCATTCCAAGCCAGAGACCAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTCCAGTCCAAAGGAGAACATGATCATTCCAAGCCAGAGACCAA  744

seq1  GCTAGAAACAGTGGCAAGAAGAGACGTGAAGAAATTGCACATGGCATCTG  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAACAGTGGCAAGAAGAGACGTGAAGAAATTGCACATGGCATCTG  794

seq1  CCTCCAGCTCCTTACCGATGAAGGGGAGGCCAGAAACAAAGGCTCTTCCA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCTCCTTACCGATGAAGGGGAGGCCAGAAACAAAGGCTCTTCCA  844

seq1  GGTGAAACCCAGAGTCAGGGAAGTTTACCTTTAACTTGGTCATTCCAGGA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAACCCAGAGTCAGGGAAGTTTACCTTTAACTTGGTCATTCCAGGA  894

seq1  AGGCTTCCAACTGCCCAGCCGTTACAGTGATAGACCTATCAGGGAAACCC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCCAACTGCCCAGCCGTTACAGTGATAGACCTATCAGGGAAACCC  944

seq1  CCACTCCATTCCCAATTCGGCTTTCACCCAAGAATCACGAACAGAACAGA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCATTCCCAATTCGGCTTTCACCCAAGAATCACGAACAGAACAGA  994

seq1  ACGCCTTGATATAATTACATGAGGTCGTTTAATTACGGAGCTCCAGACCG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTTGATATAATTACATGAGGTCGTTTAATTACGGAGCTCCAGACCG  1044

seq1  ACGTGCATCCCACACGGGAGATAACGGATGTCGGCCATGAGGCTCGAAAG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATCCCACACGGGAGATAACGGATGTCGGCCATGAGGCTCGAAAG  1094

seq1  CTAGGGGTTTTTATGGGGTAAGGAGCTTAGGGGTGTGGAATTC  1129
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGTTTTTATGGGGTAAGGAGCTTAGGGGTGTGGAATTC  1137

seq1: chr10_129442421_129443072
seq2: B6Ng01-205F22.g_233_884

seq1  GAGACAGGTTTCTTCACTAGGCCCAAAGAATTCAGGCAGAACTATAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGTTTCTTCACTAGGCCCAAAGAATTCAGGCAGAACTATAGAAC  50

seq1  ATAAATAAATTTTATGCCTCAGTCCAACCTTTCTTCTTAATAACAGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATTTTATGCCTCAGTCCAACCTTTCTTCTTAATAACAGGGAG  100

seq1  GAGATGTAGCCTCTCACAAGCCTGAAGCAGGCTGAGCCAGACCTTGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTAGCCTCTCACAAGCCTGAAGCAGGCTGAGCCAGACCTTGACTT  150

seq1  TGTTGTCACTAAGGAGATTACGTAGGGTGGAGCCTACCTCCCTGGATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCACTAAGGAGATTACGTAGGGTGGAGCCTACCTCCCTGGATCAC  200

seq1  TCTACTGTTCAGCCTCTGCTACTGCTGCTACCTGCTGGGAGTCAGCCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTTCAGCCTCTGCTACTGCTGCTACCTGCTGGGAGTCAGCCTAG  250

seq1  CTATTCGGAGTCTACATCCAATCCTACATGTGGTCACCTGTAGCTGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCGGAGTCTACATCCAATCCTACATGTGGTCACCTGTAGCTGGGCT  300

seq1  CCAAGGATGATTTGGCAGGAATGGGCTTCCCCTCTCCTTTATAAAACGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGATGATTTGGCAGGAATGGGCTTCCCCTCTCCTTTATAAAACGTG  350

seq1  TCCGCCATTAAAAATTTGAACCTTGAGCAGACTAGTTGCCTTGGTTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCATTAAAAATTTGAACCTTGAGCAGACTAGTTGCCTTGGTTCCAT  400

seq1  TATCTCTCAACCCACCTAGATTCCCTCTTCTCTTCCAGTTCCAAGATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCAACCCACCTAGATTCCCTCTTCTCTTCCAGTTCCAAGATGCC  450

seq1  TTCCAGGCTCGAACCCGGACATGAGAGCCGCAGGCCAGTCCCAACAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGCTCGAACCCGGACATGAGAGCCGCAGGCCAGTCCCAACAGTTA  500

seq1  TCTAACTACTTATGGCATGGGGCTTCTCCTGAAGAATGGTTGATGTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTACTTATGGCATGGGGCTTCTCCTGAAGAATGGTTGATGTAAAT  550

seq1  TTAAATTTAGGCATAGTTTGTTTTGTTCAGGCACTTTTTGTCTCATATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTAGGCATAGTTTGTTTTGTTCAGGCACTTTTTGTCTCATATTT  600

seq1  CTTTTGTTTTTGTTTTTGTCTGAGGGAGGGAAGGAATAAGGGGGAGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTTTGTTTTTGTTTTTGTCTGAGGGAGGGAAGGAATAAGGGGGAGAGAT  650

seq1  AA  652
      ||
seq2  AA  652