BAC Information

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BAC

Clone NameB6Ng01-205O13
Chromosome10 (Build37)
Map Location 9,646,504 - 9,647,625
singlet/doubletsinglet
Overlap geneLOC100039238
Upstream geneEG666625, LOC666636, E130306M17Rik, LOC666658, LOC620417, Stxbp5
Downstream geneLOC665110, 9130014G24Rik, Rab32, EG382450, Grm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205O13.bB6Ng01-205O13.g
ACCGA025462GA025463
length1,1091,204
definitionB6Ng01-205O13.b B6Ng01-205O13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtgatccaccatgtgggtacgtggaatcaaaccctggtccc
ctgcaagagcagcaagtgctgttaactgctgagctgtctatgcagcaaaa
atcggtgcatgctaatcaatcagcctttccagatacatctgtccgggaag
ttttgcttgcagatcttgggttgtattcatagtctcatgtctttaatatg
tagagttcctcagacttattttatgatcttaatgtttttggtagagtaaa
attggcaagtttgtggaatattctttgatgttccctcacagttagcttca
ggtttgtatattttattttttatccacgcggtcttgtatctttagggaat
cctataaggagtcttatagtcttagttgctgtgatgaaacaccatagcca
aaggcaaggcaggaaggaaggaaatggtttatttggctcacacttccaca
ttgcagtccatcactgagagaatttagggcagaaacccagtggcaggagc
tgatgccaatgtcatggtggaatgctgcttattggcatgctcagacttct
ttactgctttttacagaaccgaggatcatcagctcagcgggggtggcacc
attccaatagaatgggccctccttcatcaatcagtaattaagaaaatgct
ctgcagctagatcaagcatttctaaattgaggctccctcttttcagataa
gtctagcctgtgttaagttgacataaaacactcatgatggcaattcattt
tgcttctagtgatagtaatttccattacttaagtttgtgactgttaggtt
agtctaccaaaacattactatttgctctttgcaattaagtactttgtagg
tggttactccaaactacttcgtaaatatcttcttactcatcaagcatgat
tttatttctactagccgtaggcttcttttagtttctctgcctctcttaat
attttggatttttcttagttccaatacagcaaaatactttagatccctgg
gttttttgtttttgttttatgaagtaatatttagaaaccaagatttcatt
gttggattgctaatggtcttctgtttttcctaaaaagacatctgggtttg
gttttatat

gaattctcacctgaggaatatcgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatctgtctggcggttcctca
gaaaattggacatagtattacaggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
acccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcaaacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctcctccactatgccca
cccttggaaggagttacagagacaaagtttggagctgagatgaaaggatg
gaccatgtagagactgccttatccagggatccaccccataatcagcatcc
aaacgctgacaccattgcatacaatagcaagattttatctaaaggaccca
gatgtagctgtctcttgtgagactatgcctgggcctagcaaacacagaag
tggatgcccacagtcagctaatggatggatcacagggctcccaatggagg
agctagagaaagtaccaaggagctaagggatcttgcaaccctatagtgga
tcacattatgaactaccagtaccggagcttcttgacctctagctgcatat
gtattcaaaagatggctagtcgggcatcactgtaaagaagagctcattgg
acacacaaaactttaattgtcctgaacagggaacacaagtctaagggaat
tgctgtaagggagtgggttatatcacgctggtcgctagcggcagttcgat
atga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_9646504_9647625
seq2: B6Ng01-205O13.b_45_1153

seq1  GAATTCCAGGTGATCCACCATGTGGGTACGTGGAATCAAACCCTGGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTGATCCACCATGTGGGTACGTGGAATCAAACCCTGGTCCC  50

seq1  CTGCAAGAGCAGCAAGTGCTGTTAACTGCTGAGCTGTCTATGCAGCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGAGCAGCAAGTGCTGTTAACTGCTGAGCTGTCTATGCAGCAAAA  100

seq1  ATCGGTGCATGCTAATCAATCAGCCTTTCCAGATACATCTGTCCGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGTGCATGCTAATCAATCAGCCTTTCCAGATACATCTGTCCGGGAAG  150

seq1  TTTTGCTTGCAGATCTTGGGTTGTATTCATAGTCTCATGTCTTTAATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTGCAGATCTTGGGTTGTATTCATAGTCTCATGTCTTTAATATG  200

seq1  TAGAGTTCCTCAGACTTATTTTATGATCTTAATGTTTTTGGTAGAGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTCCTCAGACTTATTTTATGATCTTAATGTTTTTGGTAGAGTAAA  250

seq1  ATTGGCAAGTTTGTGGAATATTCTTTGATGTTCCCTCACAGTTAGCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCAAGTTTGTGGAATATTCTTTGATGTTCCCTCACAGTTAGCTTCA  300

seq1  GGTTTGTATATTTTATTTTTTATCCACGCGGTCTTGTATCTTTAGGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTATATTTTATTTTTTATCCACGCGGTCTTGTATCTTTAGGGAAT  350

seq1  CCTATAAGGAGTCTTATAGTCTTAGTTGCTGTGATGAAACACCATAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAAGGAGTCTTATAGTCTTAGTTGCTGTGATGAAACACCATAGCCA  400

seq1  AAGGCAAGGCAGGAAGGAAGGAAATGGTTTATTTGGCTCACACTTCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAGGCAGGAAGGAAGGAAATGGTTTATTTGGCTCACACTTCCACA  450

seq1  TTGCAGTCCATCACTGAGAGAATTTAGGGCAGAAACCCAGTGGCAGGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTCCATCACTGAGAGAATTTAGGGCAGAAACCCAGTGGCAGGAGC  500

seq1  TGATGCCAATGTCATGGTGGAATGCTGCTTATTGGCATGCTCAGACTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCAATGTCATGGTGGAATGCTGCTTATTGGCATGCTCAGACTTCT  550

seq1  TTACTGCTTTTTACAGAACCGAGGATCATCAGCTCAGCGGGGGTGGCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCTTTTTACAGAACCGAGGATCATCAGCTCAGCGGGGGTGGCACC  600

seq1  ATTCCAATAGAATGGGCCCTCCTTCATCAATCAGTAATTAAGAAAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAATAGAATGGGCCCTCCTTCATCAATCAGTAATTAAGAAAATGCT  650

seq1  CTGCAGCTAGATCAAGCATTTCTAAATTGAGGCTCCCTCTTTTCAGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCTAGATCAAGCATTTCTAAATTGAGGCTCCCTCTTTTCAGATAA  700

seq1  GTCTAGCCTGTGTTAAGTTGACATAAAACACTCATGATGGCAATTCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGCCTGTGTTAAGTTGACATAAAACACTCATGATGGCAATTCATTT  750

seq1  TGCTTCTAGTGATAGTAATTTCCATTACTTAAGTTTGTGACTGTTAGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTAGTGATAGTAATTTCCATTACTTAAGTTTGTGACTGTTAGGTT  800

seq1  AGTCTACCAAAACATTACTATTTGCTCTTTGCAATTAAGTACTTTGTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACCAAAACATTACTATTTGCTCTTTGCAATTAAGTACTTTGTAGG  850

seq1  TGGTTACTCCAAAACTACTTCGTAAATATCTTCTTACTCATCAAGCATGA  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACTCC-AAACTACTTCGTAAATATCTTCTTACTCATCAAGCATGA  899

seq1  TTTTATTTCTACTAGCCGTAGGCTTCTTTTTAGTTTCTCTGCCTCTTCTT  950
      |||||||||||||||||||||||||| |||||||||||||||||| ||||
seq2  TTTTATTTCTACTAGCCGTAGGCTTC-TTTTAGTTTCTCTGCCTC-TCTT  947

seq1  AATATTTTGGATTTTTCTTAGTTCCAAATACAGCAAAATACTTTAGGATC  1000
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  AATATTTTGGATTTTTCTTAGTTCC-AATACAGCAAAATACTTTA-GATC  995

seq1  CCTGGGTTTTTTGTTTTTGTTTTTAATGAAAAGTAATATTTAGAAACCAA  1050
      |||||||||||||||||||||||  |||  ||||||||||||||||||||
seq2  CCTGGGTTTTTTGTTTTTGTTTT--ATG--AAGTAATATTTAGAAACCAA  1041

seq1  GATTTCCATGTTTGATGTGCTAATTGGTCTTCTGTTTTTCCTAAAAAGCA  1100
      ||||||  |||| ||| |||||| |||||||||||||||||||||||| |
seq2  GATTTCATTGTTGGAT-TGCTAA-TGGTCTTCTGTTTTTCCTAAAAAG-A  1088

seq1  CATCTGGGTTTGTGTTTTATAT  1122
      |||||||||||| |||||||||
seq2  CATCTGGGTTTG-GTTTTATAT  1109


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