BAC Information

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BAC

Clone NameB6Ng01-206G09
Chromosome10 (Build37)
Map Location 116,613,034 - 116,613,892
singlet/doubletsinglet
Overlap genenone
Upstream genePtprr, Ptprb, Kcnmb4, Cnot2, LOC668080, EG668091, Gm239, Rab3ip, D630029K05Rik, LOC544741, Best3, Lrrc10, Cct2, Frs2
Downstream geneYeats4, 9530003J23Rik, Lyzs, Lyz, Cpsf6, LOC668146, LOC668149, Kifc5c, Cpm, Mdm2, Slc35e3, Nup107, Rap1b, Mdm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206G09.bB6Ng01-206G09.g
ACCGA025823GA025824
length8611,203
definitionB6Ng01-206G09.b B6Ng01-206G09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcaccagccagtgtagcctggtggttgagctctaagacaatg
aaagcccgtgtgttaaatggcaatggactaaataaataagtgtaaaacaa
agatttttaaagatgtatttctgatcttgagttctgtagaagctaccaat
tatgcagaagggtagaaataaaaacactacaggccaggaggtggtgactc
acatctttaatcccaacaggcagatctctgtgagttcgaggccagcctaa
tctacagagtgagttccggggctacacaaagaaaccctaccttgaaaaca
aaaataaataaataaataaaatacaataaaaaagtaaaagctaggagata
ttttagatcttatgaagaacgatgttaattagaagagaccattgctgaag
gggacaaactgacattacttacgcaaacaacgttgggaaaatgtgattgc
tatttttttattattatttattttgctttaagatagacttggggaaataa
ttgtcacttatcccattaaaaaaataaataaaaaggggtggggggctgga
gagatggcttagaggacatgagttcaattcccagcaactactcggtggct
cataaccatctataatgagatctggtgccctcttctggcctgcagacaga
acatacatgcaggcagaacactctacataataaataaatctttaaaaata
agccgggcatggtggtgctcgcctttaatcccagcactcgggaggcagag
gcaggtggatttctgagttcgaggccggcctagtctacattctgagatcc
aggacaccagtgctatctagagaaacccctgtcacaaaaaaacaataaat
aattaataaat
gaattctttagcatatacatttgatcccaaacaatgacatctaactgagg
ggcagacaaaatgacaaatcggagaaagatttgacgaatgagtcagagac
aggatatatccaactctcagaagaaaagctatttatgagcagtgcaggga
gagaggcaatactgttcagtcagtactgttgagttcagttcccttcagtt
agtactgtcagtgagtgcagtgaggtcagtagaatcagtgcagctcagtg
aatgttacacagcaagtgcagtgaggtcagtagagtgagtgcaactcagt
gcacttcagtcagtgcatacagtgcagtgaggtgagagtagtgcagggaa
tgcagtacagggagtgcagttcagtgcagtgagtgcagtgcagaaagtac
aatgcagtgagtgcggtacagtactattgagttcatttgtgactttaggc
agttcagtacaggtcagcataggcagctgaatgccaagaataaaaagcca
gaagaattgattaaattgccagcgttagtttgagggcaagcaaagcaatt
cagtgagaagctgagagaagccagattgaatcagtcagcttacctgtgac
caccctcggccacgcgtactgggtactcctgaaaggcaggctggggctga
aagagactagatggcgagaaaagaacgaggccaagacaggttctgatcaa
agccccaaagtttactaagagtctgtgtttataaagaggggaggcccgtc
ctctgccaatccattcttggtgccttgagccagcctgtaggcgacatgca
ggataggatgtgtcttggaatggctcaagggtctctcagcaggtagccga
gtctcagagaagagcagcggtacttgtcgtaacaatagagccatctaaat
cggaaggctacaccccagtgatctcatagtcagtggcagcaaagtctgaa
tcagcctgcttcaaggctgaggaggctacatccctccctaaataatataa
taaaattagctggactgggcataaatttatttatgcctccatagtcctgc
tgggagttatggtggctgcactggtgctgctggacctcagattttcgact
atttcttattccgtcagaagaaattattgcagcctgttggctattgccca
acatgctcctggggtatttataataagcacgcctctcgtggcactaatac
tcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_116613034_116613892
seq2: B6Ng01-206G09.b_45_905

seq1  GAATTCACTCACCAGCCAGTGTAGCCTGGTGGTTGAGCTCTAAGACAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACCAGCCAGTGTAGCCTGGTGGTTGAGCTCTAAGACAATG  50

seq1  AAAGCCCGTGTGTTAAATGGCAATGGACTAAATAAATAAGTGTAAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCGTGTGTTAAATGGCAATGGACTAAATAAATAAGTGTAAAACAA  100

seq1  AGATTTTTAAAGATGTATTTCTGATCTTGAGTTCTGTAGAAGCTACCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTAAAGATGTATTTCTGATCTTGAGTTCTGTAGAAGCTACCAAT  150

seq1  TATGCAGAAGGGTAGAAATAAAAACACTACAGGCCAGGAGGTGGTGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGAAGGGTAGAAATAAAAACACTACAGGCCAGGAGGTGGTGACTC  200

seq1  ACATCTTTAATCCCAACAGGCAGATCTCTGTGAGTTCGAGGCCAGCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTAATCCCAACAGGCAGATCTCTGTGAGTTCGAGGCCAGCCTAA  250

seq1  TCTACAGAGTGAGTTCCGGGGCTACACAAAGAAACCCTACCTTGAAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAGTGAGTTCCGGGGCTACACAAAGAAACCCTACCTTGAAAACA  300

seq1  AAAATAAATAAATAAATAAAATACAATAAAAAAGTAAAAGCTAGGAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATAAATAAATAAAATACAATAAAAAAGTAAAAGCTAGGAGATA  350

seq1  TTTTAGATCTTATGAAGAACGATGTTAATTAGAAGAGACCATTGCTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATCTTATGAAGAACGATGTTAATTAGAAGAGACCATTGCTGAAG  400

seq1  GGGACAAACTGACATTACTTACGCAAACAACGTTGGGAAAATGTGATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAACTGACATTACTTACGCAAACAACGTTGGGAAAATGTGATTGC  450

seq1  TATTTTTTTATTATTATTTATTTTGCTTTAAGATAGACTTGGGGAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTATTATTATTTATTTTGCTTTAAGATAGACTTGGGGAAATAA  500

seq1  TTGTCACTTATCCCATTAAAAAAATAAATAAAAAGGGGTGGGGGGCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTTATCCCATTAAAAAAATAAATAAAAAGGGGTGGGGGGCTGGA  550

seq1  GAGATGGCTTAGAGGACATGAGTTCAATTCCCAGCAACTACTCGGTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTTAGAGGACATGAGTTCAATTCCCAGCAACTACTCGGTGGCT  600

seq1  CATAACCATCTATAATGAGATCTGGTGCCCTCTTCTGGCCTGCAGACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCATCTATAATGAGATCTGGTGCCCTCTTCTGGCCTGCAGACAGA  650

seq1  ACATACATGCAGGCAGAACACTCTACATAATAAATAAATCTTTAAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGCAGGCAGAACACTCTACATAATAAATAAATCTTTAAAAATA  700

seq1  AGCCGGGCATGGTGGTGCTCGCCTTTAATCCCAGCACTCGGGAGGCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGGCATGGTGGTGCTCGCCTTTAATCCCAGCACTCGGGAGGCAGAG  750

seq1  GCAGGTGGATTTCTGAGTTCGAGGCCGGCCTAGTCTACAGTCTGAGTTCC  800
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  GCAGGTGGATTTCTGAGTTCGAGGCCGGCCTAGTCTACATTCTGAGATCC  800

seq1  AGGACAGCCAGGGCTATACAGAGAAA-CCCTGTCTCAAAAAGACCAATAA  849
      |||||| |||| |||||  ||||||| ||||||| |||||| | ||||||
seq2  AGGACA-CCAGTGCTATCTAGAGAAACCCCTGTCACAAAAA-AACAATAA  848

seq1  ATA---AATAAAT  859
      |||   |||||||
seq2  ATAATTAATAAAT  861