BAC Information

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BAC

Clone NameB6Ng01-207E12
Chromosome10 (Build37)
Map Location 128,915,096 - 129,101,056
singlet/doubletdoublet
Overlap geneOlfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800
Upstream geneSmarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788
Downstream geneSmt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207E12.bB6Ng01-207E12.g
ACCGA026480GA026481
length1,0811,151
definitionB6Ng01-207E12.b B6Ng01-207E12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,099,999 - 129,101,056)(128,915,096 - 128,915,995)
sequence
gaattccagagtggttatacaagtttcctctccttccagcaatgaaggag
tgttccctttgctccacattcttcccagaatatgctggcccttgagtttt
gatcttggtcttagatatttttcttttttatttccttgcctttctttctt
ttgttaaatattatttaaaaattctattgatttgcctagcagcttttaat
aaaattattccttgacaatcttatgtgtataaagtctactctgattactg
taagccccatcatctctagtacccctcccattcctattacactccatttt
ccttctaaaaaattcctcactgcatctctacatctgaaagtctctctctg
cctctctgtctctgcctctctgtctccctgtgtctctctgtctctgtctg
tctgtctgtctctgtctctctgtctctctgtctctcttctctctctccct
ccctccctccctccctccctccctcttttccatcctcctctcagatcctc
tgagtttatccaaaatgacctgtttgaccatagttttggaactaaacact
ggattctggagtgttcctcattaagtacataactaaaaaaaaaaaaaaaa
aaaaaaaaaatggtgtttcctttcccagaatcgatcagtagcaatagatt
gtgaataagagtaaatatgcttgagcctttcattgatctatgattgactg
ttgatggtcagagtcttgtgtcagcccattacaagtggccatacaagctg
ttatgaagttatgttttgtactagctgtgcatgctaggcaaaacaaaaac
aaaacaacacagttaaagtgaaaacaacaacaaaatagcattgtcccagc
cttgtctcccttatattttgggcttctttatttctttcctactaccctat
ttttcaaattgattccctgagccctaggagatagacatacaaatgtacag
atttgagctgagcagtcaaccatttattatcagtagcaccaatcagtcat
ggtgttctcttgtaatcactatcatttattgagcaacacccgcacaaccc
acacactaaaagtatttctgaattaaagtct
gaattctgctggcttctattctctgcagagtgaccagttgtggtttttca
tgttaactgccatctactgcaaaaagaaacttctctaataaatgctgaaa
agtacactaatttataggtatagaattaagtcattaaaaatcactttatt
atgtctatttatcagaatgatagtagtagggcttatgacttttctatggc
agacttttggccccagtaatggtgccataagtgtgttccattgtaggagc
ggaccttaaatctaataaaaagtgaatgggtattgttataacattcaccc
cactcctataccagtgggcatatcttgcggatcatagtttttatttcttg
caggttcagagttgagtaaattgattgttactattctcctccaatagcat
taacacccttagcactatgaaacctagcctgcctgaggaccagcttcatt
tctctatgttgtgatccaagtgggtggttttttcaggggcagtgtcttac
catcaaatcctgaggataatcaagagcagtaacaataacttgcaatgtct
gggtagtctatctatgtaaccaacaactacaaagaagataaccaagttct
tacattgggccttttatttactagcctgtgtgtctggtatgggcactgta
aattcatttaaattctttttatatatggatatctataggttttaagaagt
tttatagtaataggtttccaggtgatttttccatgagctctttcatgtta
gttacctctccctgtacttaattagcgaggcagtaggactaatcaaatct
cagaaatttataaaattatgtacagaaaagcacaccatcatttaactgaa
aaggcagccaacagaacagggaaaatctttaccagatacacatctgacaa
ggatttagtaactagaatatacaaagagttcaaaattgaaaaaaaaaaac
ctaacaaatatgagacattaactaaacagagaattgctaaaagataaaac
acaatgaacagaaataaagttttctatgttcatatctacatcagggaaat
aaaataaactactttgaaatcatatgtcacctcctcagaaaattgagatc
gatctaacctcagaccagctagcactctggacatgtaccgaaagaatgct
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129099999_129101056
seq2: B6Ng01-207E12.b_34_1114 (reverse)

seq1  AGACTT--AATCAGAAAATACTTTT-GTGTGTGTG-TGTGCGTGTG-TGC  45
      ||||||  | |||| |||||||||| ||||||| | |||||| ||| |||
seq2  AGACTTTAATTCAG-AAATACTTTTAGTGTGTGGGTTGTGCGGGTGTTGC  49

seq1  TCAATAAATGATAGTGATTAC-AGAG-ACA-CATGACTGATT-GTGCTAC  91
      ||||||||||||||||||||| |||| ||| ||||||||||| |||||||
seq2  TCAATAAATGATAGTGATTACAAGAGAACACCATGACTGATTGGTGCTAC  99

seq1  TGATAAT-AATGGTTGACTGCTCAGCTCAAATCTGTACATTTGTATGTCT  140
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATAAATGGTTGACTGCTCAGCTCAAATCTGTACATTTGTATGTCT  149

seq1  ATCTCCTA-GGCTCA-GGAATC-ATTTG-AAAATA-GGTAGTAGG-AAGA  184
      |||||||| |||||| |||||| ||||| |||||| ||||||||| ||||
seq2  ATCTCCTAGGGCTCAGGGAATCAATTTGAAAAATAGGGTAGTAGGAAAGA  199

seq1  ATTAA--GAGCCC-AAATAT-AGGGAGAC-AGGCT-GGACAATGCTATTT  228
      | |||   ||||| |||||| |||||||| ||||| ||||||||||||||
seq2  AATAAAGAAGCCCAAAATATAAGGGAGACAAGGCTGGGACAATGCTATTT  249

seq1  TGTTGTTGTTTTCACTTT-ACTGTGTTGTTTTGTTTTTGTTTTGCCTAGC  277
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTTTCACTTTAACTGTGTTGTTTTGTTTTTGTTTTGCCTAGC  299

seq1  ATGCACAGCTAGTAC-AAACATAACTTCATAACAGCTTGTATGGCCACTT  326
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATGCACAGCTAGTACAAAACATAACTTCATAACAGCTTGTATGGCCACTT  349

seq1  GTAATGGGCTGACACAAGACTCTGACCATCAACAGTCAATCATAGATCAA  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGGCTGACACAAGACTCTGACCATCAACAGTCAATCATAGATCAA  399

seq1  TGAAAGGCTCAAGCATATTTACTCTTATTCACAATCTATTGCTACTGATC  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGCTCAAGCATATTTACTCTTATTCACAATCTATTGCTACTGATC  449

seq1  GATTCTGGGAAAGGAAACACCATTTTTTTTTTTTTTTTTTTTTTTTTTAG  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGGGAAAGGAAACACCATTTTTTTTTTTTTTTTTTTTTTTTTTAG  499

seq1  TTATGTACTTAATGAGGAACACTCCAGAATCCAGTGTTTAGTTCCAAAAC  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTACTTAATGAGGAACACTCCAGAATCCAGTGTTTAGTTCCAAAAC  549

seq1  TATGGTCAAACAGGTCATTTTGGATAAACTCAGAGGATCTGAGAGGAGGA  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCAAACAGGTCATTTTGGATAAACTCAGAGGATCTGAGAGGAGGA  599

seq1  TGGAAAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGAGAAGAGA  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGAGAAGAGA  649

seq1  GACAGAGAGACAGAGAGACAGAGACAGACAGACAGACAGAGACAGAGAGA  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGAGACAGAGAGACAGAGACAGACAGACAGACAGAGACAGAGAGA  699

seq1  CACAGGGAGACAGAGAGGCAGAGACAGAGAGGCAGAGAGAGACTTTCAGA  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGAGACAGAGAGGCAGAGACAGAGAGGCAGAGAGAGACTTTCAGA  749

seq1  TGTAGAGATGCAGTGAGGAATTTTTTAGAAGGAAAATGGAGTGTAATAGG  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGATGCAGTGAGGAATTTTTTAGAAGGAAAATGGAGTGTAATAGG  799

seq1  AATGGGAGGGGTACTAGAGATGATGGGGCTTACAGTAATCAGAGTAGACT  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAGGGGTACTAGAGATGATGGGGCTTACAGTAATCAGAGTAGACT  849

seq1  TTATACACATAAGATTGTCAAGGAATAATTTTATTAAAAGCTGCTAGGCA  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACACATAAGATTGTCAAGGAATAATTTTATTAAAAGCTGCTAGGCA  899

seq1  AATCAATAGAATTTTTAAATAATATTTAACAAAAGAAAGAAAGGCAAGGA  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATAGAATTTTTAAATAATATTTAACAAAAGAAAGAAAGGCAAGGA  949

seq1  AATAAAAAAGAAAAATATCTAAGACCAAGATCAAAACTCAAGGGCCAGCA  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAAGAAAAATATCTAAGACCAAGATCAAAACTCAAGGGCCAGCA  999

seq1  TATTCTGGGAAGAATGTGGAGCAAAGGGAACACTCCTTCATTGCTGGAAG  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGGGAAGAATGTGGAGCAAAGGGAACACTCCTTCATTGCTGGAAG  1049

seq1  GAGAGGAAACTTGTATAACCACTCTGGAATTC  1058
      ||||||||||||||||||||||||||||||||
seq2  GAGAGGAAACTTGTATAACCACTCTGGAATTC  1081

seq1: chr10_128915096_128915995
seq2: B6Ng01-207E12.g_338_1217

seq1  GTGAATGGGTATTGTTATAACATTCACCCCACTCCTATACCAGTGGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGGGTATTGTTATAACATTCACCCCACTCCTATACCAGTGGGCAT  50

seq1  ATCTTGCGGATCATAGTTTTTATTTCTTGCAGGTTCAGAGTTGAGTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCGGATCATAGTTTTTATTTCTTGCAGGTTCAGAGTTGAGTAAAT  100

seq1  TGATTGTTACTATTCTCCTCCAATAGCATTAACACCCTTAGCACTATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTTACTATTCTCCTCCAATAGCATTAACACCCTTAGCACTATGAA  150

seq1  ACCTAGCCTGCCTGAGGACCAGCTTCATTTCTCTATGTTGTGATCCAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCCTGCCTGAGGACCAGCTTCATTTCTCTATGTTGTGATCCAAGT  200

seq1  GGGTGGTTTTTTCAGGGGCAGTGTCTTACCATCAAATCCTGAGGATAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTTTTTTCAGGGGCAGTGTCTTACCATCAAATCCTGAGGATAATC  250

seq1  AAGAGCAGTAACAATAACTTGCAATGTCTGGGTAGTCTATCTATGTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGTAACAATAACTTGCAATGTCTGGGTAGTCTATCTATGTAACC  300

seq1  AACAACTACAAAGAAGATAACCAAGTTCTTACATTGGGCCTTTTATTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTACAAAGAAGATAACCAAGTTCTTACATTGGGCCTTTTATTTAC  350

seq1  TAGCCTGTGTGTCTGGTATGGGCACTGTAAATTCATTTAAATTCTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGTGTGTCTGGTATGGGCACTGTAAATTCATTTAAATTCTTTTTA  400

seq1  TATATGGATATCTATAGGTTTTAAGAAGTTTTATAGTAATAGGTTTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGATATCTATAGGTTTTAAGAAGTTTTATAGTAATAGGTTTCCAG  450

seq1  GTGATTTTTCCATGAGCTCTTTCATGTTAGTTACCTCTCCCTGTACTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTTCCATGAGCTCTTTCATGTTAGTTACCTCTCCCTGTACTTAA  500

seq1  TTAGCGAGGCAGTAGGACTAATCAAATCTCAGGAAATTATAAAATTATGT  550
      |||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  TTAGCGAGGCAGTAGGACTAATCAAATCTCAGAAATTTATAAAATTATGT  550

seq1  ACAGAAAAGCACACCATCATTTAACTGAAAAGGCAGCCAACAGAACAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAGCACACCATCATTTAACTGAAAAGGCAGCCAACAGAACAGGG  600

seq1  AAAATCTTTACCAGATACACATCTGACAAGGATTTAGTAACTAGAATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTTACCAGATACACATCTGACAAGGATTTAGTAACTAGAATATA  650

seq1  CAAAGAGTTCAAAATTGAAAAAAAAAAAACCTAAACAAAATATGAGACAA  700
      ||||||||||||||||| ||||||||||||||||   ||||||||||| |
seq2  CAAAGAGTTCAAAATTG-AAAAAAAAAAACCTAA--CAAATATGAGAC-A  696

seq1  TAAACTAAACAGAGAATTGCTAAAAGATAAAACACAAATGACAGAAATAA  750
      | |||||||||||||||||||||||||||||||||||   ||||||||||
seq2  TTAACTAAACAGAGAATTGCTAAAAGATAAAACACAATGAACAGAAATAA  746

seq1  AAGTTTCTAATGTTCAATATCCTTAACCATCCAGGGAAATAAAAATTAAA  800
      |  ||||| |||||| |||||  ||  ||| |||||||||||||    ||
seq2  AGTTTTCT-ATGTTC-ATATC--TA--CAT-CAGGGAAATAAAA---TAA  786

seq1  ACTACTTTGAAATCCATATGTCAACTCCTCAGAAAATTGAGAATCGATCT  850
      ||||||||||||| ||||||||| ||||||||||||||||| ||||||||
seq2  ACTACTTTGAAAT-CATATGTCACCTCCTCAGAAAATTGAG-ATCGATCT  834

seq1  -ACCTCAAGACCCAGCTATAGCACTCTTGAGCATGTACCCAAAAGATGCT  899
       ||||| ||| |||||  ||||||||| || |||||||| |||  |||||
seq2  AACCTC-AGA-CCAGC--TAGCACTCTGGA-CATGTACCGAAAGAATGCT  879

seq1  C  900
      |
seq2  C  880