BAC Information

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BAC

Clone NameB6Ng01-210F06
Chromosome10 (Build37)
Map Location 91,636,406 - 91,726,511
singlet/doubletdoublet
Overlap geneLOC667203
Upstream geneLOC100041769, LOC100041799
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210F06.bB6Ng01-210F06.g
ACCGA028694GA028695
length4661,084
definitionB6Ng01-210F06.b B6Ng01-210F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,636,406 - 91,636,877)(91,725,428 - 91,726,511)
sequence
acctgtggccattggggatgacagaagtcatagttccatgataacaggct
gagagaggaaactgggaaataagaaagcaaagattttatgtcctatagat
atttgaaaagtttgctcatgaaagacagatgatccattagctgtgggaaa
tatgataggttcatgtgtgtgtgtgtgtgtccaagaggcaatctctctct
ctctctctctctctctctctctctctctctctctctctctctctctctct
ctgcctctctctctaaatcttgtcctgattcatgaaaaaaaaatttagta
ggaaattaatggtatttactaggacaaaaaaaaacaagaagaagaagaag
aagataaacaggtaaaaggacctgcctctgtgaagaggcatttctccatt
tcagaaggagaaaagagaggagaggtgaggaagctgagaaggatgcagag
ttggtcaggagaaggg
gaattctgttctgctagatttccctggactctgtaatttcatgccaatgg
gtgtcgatctgaacacctagacaggtggcctaaatgagagggaagcgttg
acatttcgctgttaatttatcttacaatgtgggctgccatgtattaaaca
tgaggtaaataaaagtgatggactaattatgaggatgtgttctgccttcc
aattactctcggattatgtgtttaatattatgaggtattctaattacagg
gggatttgctgctgcagaaatcttaacttgaggaatcctaatttcctctg
cagggcaactcaactaactctgtttttctgctaaataaatgaacacccta
gactttccaacccaaattggtaatttttttttgtagttgaaccatatttt
aggcttatatttttgacaacctatttcacagttggctagccttccccttc
ccccctacccccacctccaaatatgggattctagaacactctcaaaaagt
agacccatgtttgatgtcataaaagggcaaatttgtcatttctttaaaag
atggcttttctttatttcaagttctgtaacttgttttggtctattaactt
tatcacatttctttcaagaacattttttgttaaaagaagaatggatcaac
acagaaggcggtttagccttatccacatgtctggttaagaattaggtgtg
aattaaaacaaaacaaaatgtcagtaactaagttctttcaagctcgaggt
aatgtccctgggcagaacaagacaagggttgaaagcaaaaaatttgcttg
gctctgtgtttaaagacgtgatgaaataaaaaattttagacccatattct
taatttaatctaattgtgcaaacaagcagtatcgttcttaactttataaa
atgggaaattttattaaaatcgatttttaaaaaaaagttatttgctttta
aactccaaagattatatcatctaaccagagctcacaattttattctggct
ctcttttgcaaataacaagcttcattacagggaagcaacagctcctaatg
attaatacaagaaaatgctacgggtttttatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91636406_91636877
seq2: B6Ng01-210F06.b_47_518

seq1  GAATTCACCTGTGGCCATTGGGGATGACAGAAGTCATAGTTCCATGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGTGGCCATTGGGGATGACAGAAGTCATAGTTCCATGATAA  50

seq1  CAGGCTGAGAGAGGAAACTGGGAAATAAGAAAGCAAAGATTTTATGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGAGAGAGGAAACTGGGAAATAAGAAAGCAAAGATTTTATGTCCT  100

seq1  ATAGATATTTGAAAAGTTTGCTCATGAAAGACAGATGATCCATTAGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATTTGAAAAGTTTGCTCATGAAAGACAGATGATCCATTAGCTGT  150

seq1  GGGAAATATGATAGGTTCATGTGTGTGTGTGTGTGTCCAAGAGGCAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATATGATAGGTTCATGTGTGTGTGTGTGTGTCCAAGAGGCAATCT  200

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  250

seq1  CTCTCTCTGCCAAAGCATATAAATAGTGTCAAGATTCATGAAAAGAAAAT  300
      |||||||||||      | |||||  ||||  |||||||||||| |||||
seq2  CTCTCTCTGCCTCTCTCTCTAAATCTTGTCCTGATTCATGAAAAAAAAAT  300

seq1  TTAGTAGGAAATTAATGGTATTTACTAGGACAAAAAAAAAAAAGAAGAAG  350
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTAGTAGGAAATTAATGGTATTTACTAGGACAAAAAAAAACAAGAAGAAG  350

seq1  AAGAAGAAGATAAACAGGTAAAAGGACCTGCCTCTGTGAAGAGGCATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGATAAACAGGTAAAAGGACCTGCCTCTGTGAAGAGGCATTTC  400

seq1  TCCATTTCAGAAGGAGAGAAGAGAGGAGAGGTGAGGAAGCAGAGAAGGAT  450
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  TCCATTTCAGAAGGAGAAAAGAGAGGAGAGGTGAGGAAGCTGAGAAGGAT  450

seq1  GCAGAGTTGGTCAGGAGAAGGG  472
      ||||||||||||||||||||||
seq2  GCAGAGTTGGTCAGGAGAAGGG  472

seq1: chr10_91725428_91726511
seq2: B6Ng01-210F06.g_64_1147 (reverse)

seq1  GCCAT-AAAACCCGTAGCATTTTCTTTGTATTATTACATTA-GAGCTGTT  48
      ||||| |||||||||||||||||| |||||||| | ||||| |||||| |
seq2  GCCATAAAAACCCGTAGCATTTTC-TTGTATTAAT-CATTAGGAGCTG-T  47

seq1  TGCTTCCCTGT-ATGAAGCTTGTTATTTGCAAAAGAG---CAGAATAAAA  94
      ||||||||||| |||||||||||||||||||||||||   ||||||||||
seq2  TGCTTCCCTGTAATGAAGCTTGTTATTTGCAAAAGAGAGCCAGAATAAAA  97

seq1  TGTGTGAGCTCTGGGTTAGATGATAATTATCTT--GAGTTTAAAAAGCAA  142
      | |||||||||| ||||||||||| || |||||  |||||| ||||||||
seq2  T-TGTGAGCTCT-GGTTAGATGAT-ATAATCTTTGGAGTTT-AAAAGCAA  143

seq1  ATAAACTTTTTTTTAAAAATCGATTTTTAATAAAATTTCCATTTTTATAA  192
      || |||||||||||||||||||| ||||||||||||||||  ||||||||
seq2  AT-AACTTTTTTTTAAAAATCGA-TTTTAATAAAATTTCCCATTTTATAA  191

seq1  AGTTAAGAACGATACTGCTTGTTTGCACAATTAGATTAAATT-AGAATAT  241
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTTAAGAACGATACTGCTTGTTTGCACAATTAGATTAAATTAAGAATAT  241

seq1  GGGTCTAAAATTTTTTATTTCATCACGTCTTTAAACACAGAGCCAAGCAA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTAAAATTTTTTATTTCATCACGTCTTTAAACACAGAGCCAAGCAA  291

seq1  TTTTTTTGCTTTCAACCCTTGTCTTGTTCTGCCCAGGGACATTACCTCGA  341
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGCTTTCAACCCTTGTCTTGTTCTGCCCAGGGACATTACCTCGA  341

seq1  GCTTGAAAGAACTTAGTTACTGACATTTTGTTTTGTTTTAATTCACACCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAAGAACTTAGTTACTGACATTTTGTTTTGTTTTAATTCACACCT  391

seq1  AATTCTTAACCAGACATGTGGATAAGGCTAAACCGCCTTCTGTGTTGATC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAACCAGACATGTGGATAAGGCTAAACCGCCTTCTGTGTTGATC  441

seq1  CATTCTTCTTTTAACAAAAAATGTTCTTGAAAGAAATGTGATAAAGTTAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTTTTAACAAAAAATGTTCTTGAAAGAAATGTGATAAAGTTAA  491

seq1  TAGACCAAAACAAGTTACAGAACTTGAAATAAAGAAAAGCCATCTTTTAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAAAACAAGTTACAGAACTTGAAATAAAGAAAAGCCATCTTTTAA  541

seq1  AGAAATGACAAATTTGCCCTTTTATGACATCAAACATGGGTCTACTTTTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGACAAATTTGCCCTTTTATGACATCAAACATGGGTCTACTTTTT  591

seq1  GAGAGTGTTCTAGAATCCCATATTTGGAGGTGGGGGTAGGGGGGAAGGGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGTTCTAGAATCCCATATTTGGAGGTGGGGGTAGGGGGGAAGGGG  641

seq1  AAGGCTAGCCAACTGTGAAATAGGTTGTCAAAAATATAAGCCTAAAATAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTAGCCAACTGTGAAATAGGTTGTCAAAAATATAAGCCTAAAATAT  691

seq1  GGTTCAACTACAAAAAAAAATTACCAATTTGGGTTGGAAAGTCTAGGGTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAACTACAAAAAAAAATTACCAATTTGGGTTGGAAAGTCTAGGGTG  741

seq1  TTCATTTATTTAGCAGAAAAACAGAGTTAGTTGAGTTGCCCTGCAGAGGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTATTTAGCAGAAAAACAGAGTTAGTTGAGTTGCCCTGCAGAGGA  791

seq1  AATTAGGATTCCTCAAGTTAAGATTTCTGCAGCAGCAAATCCCCCTGTAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGATTCCTCAAGTTAAGATTTCTGCAGCAGCAAATCCCCCTGTAA  841

seq1  TTAGAATACCTCATAATATTAAACACATAATCCGAGAGTAATTGGAAGGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATACCTCATAATATTAAACACATAATCCGAGAGTAATTGGAAGGC  891

seq1  AGAACACATCCTCATAATTAGTCCATCACTTTTATTTACCTCATGTTTAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACATCCTCATAATTAGTCCATCACTTTTATTTACCTCATGTTTAA  941

seq1  TACATGGCAGCCCACATTGTAAGATAAATTAACAGCGAAATGTCAACGCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGCAGCCCACATTGTAAGATAAATTAACAGCGAAATGTCAACGCT  991

seq1  TCCCTCTCATTTAGGCCACCTGTCTAGGTGTTCAGATCGACACCCATTGG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCATTTAGGCCACCTGTCTAGGTGTTCAGATCGACACCCATTGG  1041

seq1  CATGAAATTACAGAGTCCAGGGAAATCTAGCAGAACAGAATTC  1084
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATTACAGAGTCCAGGGAAATCTAGCAGAACAGAATTC  1084