BAC Information

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BAC

Clone NameB6Ng01-210F13
Chromosome10 (Build37)
Map Location 73,193,058 - 73,193,782
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC432471, LOC544705, LOC100039981, LOC623191
Downstream genePcdh15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210F13.bB6Ng01-210F13.g
ACCGA028707GA028708
length1,097726
definitionB6Ng01-210F13.b B6Ng01-210F13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttattacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagatttgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttctttcagagatttgaagttttttatc
atacagatctttcacctccttagttagagtcacgccaagatatttttata
ttatttgtgactattgagaagggtgttgtttccctaatttctttctcagc
tgttattctttgtataagagaaaggtccttgactttgtttgagtttattt
taatatcaagcttacttccacccgaagcttgtttatataaggtttac
gaattctagatggatacacacagatggagttgaatttaaatatagccttg
acctctagcatcttttttgaacctttaaaaggcacttgaaaaatgaggaa
gccctctatcatcagtgatggtttcacatggctttgatatgtttggtctt
tcttcagggtagaaatgagttcatggttcattgtcctgtgtgttcagaaa
cttagcaggacacctgaggagctgttcagcaaggtctctaagaattaaaa
aggcatgacacacagacctgcctccccagtgggagggaaatgtgacgagg
ggggttgccttctctgagctttaaggcacgtgcagtaggtttctacagga
aatcaccttcctaatatcccaattaatgtatctgctaattgacttcatct
tcaactctgttttgtgaccatggaaattgatgtaactgcttctacactgg
tatgtgtccttttaggtcaactgaatctacattctctggccaggatcatt
tgtattagcagtgagatggtattttcaatactgaacaaaaattactgact
tttgcattttttttagcttcagaaatatcccaggtgtagtttcttctatg
aatttttcaacatagcaccataaacttagaaaacatctacttcctcacag
ttttgttctttagtgattttttttttatgagccaacagagatttacagaa
aacaaaaagaatggggggggggggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_73193058_73193782
seq2: B6Ng01-210F13.g_63_788 (reverse)

seq1  TA-CCCCCCCCCCCATTCTTTTTGTTTTCTGTAAATCTCTGTTGGCTCAT  49
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCCCCCCCCATTCTTTTTGTTTTCTGTAAATCTCTGTTGGCTCAT  50

seq1  AAAAAAAAAATCACTAAAGAACAAAACTGTGAGGAAGTAGATGTTTTCTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAATCACTAAAGAACAAAACTGTGAGGAAGTAGATGTTTTCTA  100

seq1  AGTTTATGGTGCTATGTTGAAAAATTCATAGAAGAAACTACACCTGGGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGGTGCTATGTTGAAAAATTCATAGAAGAAACTACACCTGGGAT  150

seq1  ATTTCTGAAGCTAAAAAAAATGCAAAAGTCAGTAATTTTTGTTCAGTATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAAGCTAAAAAAAATGCAAAAGTCAGTAATTTTTGTTCAGTATT  200

seq1  GAAAATACCATCTCACTGCTAATACAAATGATCCTGGCCAGAGAATGTAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACCATCTCACTGCTAATACAAATGATCCTGGCCAGAGAATGTAG  250

seq1  ATTCAGTTGACCTAAAAGGACACATACCAGTGTAGAAGCAGTTACATCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTGACCTAAAAGGACACATACCAGTGTAGAAGCAGTTACATCAA  300

seq1  TTTCCATGGTCACAAAACAGAGTTGAAGATGAAGTCAATTAGCAGATACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGGTCACAAAACAGAGTTGAAGATGAAGTCAATTAGCAGATACA  350

seq1  TTAATTGGGATATTAGGAAGGTGATTTCCTGTAGAAACCTACTGCACGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGGGATATTAGGAAGGTGATTTCCTGTAGAAACCTACTGCACGTG  400

seq1  CCTTAAAGCTCAGAGAAGGCAACCCCCCTCGTCACATTTCCCTCCCACTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAGCTCAGAGAAGGCAACCCCCCTCGTCACATTTCCCTCCCACTG  450

seq1  GGGAGGCAGGTCTGTGTGTCATGCCTTTTTAATTCTTAGAGACCTTGCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGGTCTGTGTGTCATGCCTTTTTAATTCTTAGAGACCTTGCTG  500

seq1  AACAGCTCCTCAGGTGTCCTGCTAAGTTTCTGAACACACAGGACAATGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTCCTCAGGTGTCCTGCTAAGTTTCTGAACACACAGGACAATGAA  550

seq1  CCATGAACTCATTTCTACCCTGAAGAAAGACCAAACATATCAAAGCCATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAACTCATTTCTACCCTGAAGAAAGACCAAACATATCAAAGCCATG  600

seq1  TGAAACCATCACTGATGATAGAGGGCTTCCTCATTTTTCAAGTGCCTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCATCACTGATGATAGAGGGCTTCCTCATTTTTCAAGTGCCTTTT  650

seq1  AAAGGTTCAAAAAAGATGCTAGAGGTCAAGGCTATATTTAAATTCAACTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTCAAAAAAGATGCTAGAGGTCAAGGCTATATTTAAATTCAACTC  700

seq1  CATCTGTGTGTATCCATCTAGAATTC  725
      ||||||||||||||||||||||||||
seq2  CATCTGTGTGTATCCATCTAGAATTC  726