BAC Information

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BAC

Clone NameB6Ng01-210G05
Chromosome10 (Build37)
Map Location 13,792,323 - 13,793,202
singlet/doubletsinglet
Overlap geneHivep2
Upstream genePlagl1, 4930519B02Rik, Ltv1, LOC666829, Phactr2, LOC100039475, Fuca2, Pex3, Deadc1, Aig1, EG666859
Downstream geneGpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210G05.bB6Ng01-210G05.g
ACCGA028737GA028738
length8811,167
definitionB6Ng01-210G05.b B6Ng01-210G05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctcctttggcttcctttgactcctccttggttcctcccttc
tcaggtcttaaatgccaggcttctgtggctctgtttagctccacttgttt
tttccttctggttctcctgatacttgcacaggtcactacccctgctgact
gctactgtatcctgtgtacccgagggcactgtgcccagtactctccttca
ctgtggtctcctggctttgtggactggagcttgggcagttcttggggact
gggttggacttgaatgatagcaaagaggactgacaggccacagacctgga
aggaaaagtatgtaggagacatggtgggactcctcactggatggtgcgtg
cgtgtttctgcttatggtttggaggtgggaagctttcagctttgatcctg
gagttaaaattcgacttttcacataaaaacgaaaagagagatgccagttt
gggtagcagtgtgatcaatttgcttttatacattttagataacaccagat
gaaatgcatgtatttttcatttgtcctgagggctcttggttggaaacaag
aatccactggaaaacttgagtcttcccccatttcttggtgtcccctcagc
tcactaagtacttcccaacaaattcacctccttggggtcacgcgtacttg
tcaggactcccatcagctattgcctctttcagcctcccagaacaatagca
gacaggagaagtagccttctgttccttttgaagataaggacccctaccct
ctcatggtttgctgaaatagcacagcaaaggagtggtgtggcccctgcag
ccgaaatgcataggcacatattctctttctgtgtggtgtatttcatttgg
taatacagtgaggggaaatggggggagggga
gaattctcacccgaggaattccgaatggcagagaagcacctgaaaaaaat
gtccaacatccttaattaccagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaagttcaggtgacag
cagatgctggcaagaatgtggagaaagaggaacactcctccactgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctt
agaaaattggacatagtactaccggaggatccagcaatacctcttctggg
catatatccagaagatgtcccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaaaccaga
tgctcctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggaatactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagcgaggtaacccaatcacaa
aggaactcacacaatatgtactcactgataagtggatactagcccaaaac
ttagtatacccaagatataagatacaatttgccaaatgcatgaaactcta
gaagaatgaagaccaaagtgtggacactatgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgaca
aaaggatggaccatctagagactgccttatctagggatccaccccataat
cagcttccaaatgctgacaccactgcatacactagcaagattttgctgaa
aggacccagatatagctgtctcttgtgagactaggcaggggcctagcaaa
cacataagtggatgctcacagtcagctattggatggatcacagggccccc
gatggagagctagagaaagtatccagagctaagagatctgcaccctgtag
gtgcacacattatgactaccagtaccccgagctcttgactctagctacat
atatgaaagatggcgtgtcagcatcactgaaagagaggcccatcgactac
aaattatatgccccagtacaggacgcaggtccaaaatgaatctgtaggca
attggggactctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_13792323_13793202
seq2: B6Ng01-210G05.b_49_929

seq1  GAATTCTTTCTCCTTTGGCTTCCTTTGACTCCTCCTTGGTTCCTCCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCCTTTGGCTTCCTTTGACTCCTCCTTGGTTCCTCCCTTC  50

seq1  TCAGGTCTTAAATGCCAGGCTTCTGTGGCTCTGTTTAGCTCCACTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTTAAATGCCAGGCTTCTGTGGCTCTGTTTAGCTCCACTTGTTT  100

seq1  TTTCCTTCTGGTTCTCCTGATACTTGCACAGGTCACTACCCCTGCTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCTGGTTCTCCTGATACTTGCACAGGTCACTACCCCTGCTGACT  150

seq1  GCTACTGTATCCTGTGTACCCGAGGGCACTGTGCCCAGTACTCTCCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGTATCCTGTGTACCCGAGGGCACTGTGCCCAGTACTCTCCTTCA  200

seq1  CTGTGGTCTCCTGGCTTTGTGGACTGGAGCTTGGGCAGTTCTTGGGGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCTCCTGGCTTTGTGGACTGGAGCTTGGGCAGTTCTTGGGGACT  250

seq1  GGGTTGGACTTGAATGATAGCAAAGAGGACTGACAGGCCACAGACCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGACTTGAATGATAGCAAAGAGGACTGACAGGCCACAGACCTGGA  300

seq1  AGGAAAAGTATGTAGGAGACATGGTGGGACTCCTCACTGGATGGTGCGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGTATGTAGGAGACATGGTGGGACTCCTCACTGGATGGTGCGTG  350

seq1  CGTGTTTCTGCTTATGGTTTGGAGGTGGGAAGCTTTCAGCTTTGATCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTTCTGCTTATGGTTTGGAGGTGGGAAGCTTTCAGCTTTGATCCTG  400

seq1  GAGTTAAAATTCGACTTTTCACATAAAAACGAAAAGAGAGATGCCAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAAATTCGACTTTTCACATAAAAACGAAAAGAGAGATGCCAGTTT  450

seq1  GGGTAGCAGTGTGATCAATTTGCTTTTATACATTTTAGATAACACCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGCAGTGTGATCAATTTGCTTTTATACATTTTAGATAACACCAGAT  500

seq1  GAAATGCATGTATTTTTCATTTGTCCTGAGGGCTCTTGGTTGGAAACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCATGTATTTTTCATTTGTCCTGAGGGCTCTTGGTTGGAAACAAG  550

seq1  AATCCACTGGAAAACTTGAGTCTTCCCCCATTTCTTGGTGTCCCCTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACTGGAAAACTTGAGTCTTCCCCCATTTCTTGGTGTCCCCTCAGC  600

seq1  TCACTAAGTACTTCCCAACAAATTCACCTCCTTGGGGTCACGCGTACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAGTACTTCCCAACAAATTCACCTCCTTGGGGTCACGCGTACTTG  650

seq1  TCAGGACTCCCATCAGCTATTGCCTCTTTCAGCCTCCCAGAACAATAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACTCCCATCAGCTATTGCCTCTTTCAGCCTCCCAGAACAATAGCA  700

seq1  GACAGGAGAAGTAGCCTTCTGTTCCTTTTGAAGATAAGGACCCCTACCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAGAAGTAGCCTTCTGTTCCTTTTGAAGATAAGGACCCCTACCCT  750

seq1  CTCATGGTTTGCTGAAATAGCACAGCAAAGGAGTGGTGTGGCCCCTGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGTTTGCTGAAATAGCACAGCAAAGGAGTGGTGTGGCCCCTGCAG  800

seq1  CCGAAATGCATAGGCACATATTCTCTTTCTGTGTGGTGTATTTCATTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAATGCATAGGCACATATTCTCTTTCTGTGTGGTGTATTTCATTTGG  850

seq1  TAATACAGTGAGGGGAAAT-GGGGGAGGGGA  880
      ||||||||||||||||||| |||||||||||
seq2  TAATACAGTGAGGGGAAATGGGGGGAGGGGA  881