BAC Information

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BAC

Clone NameB6Ng01-210G11
Chromosome10 (Build37)15 (Build37)
Map Location 91,684,383 - 91,684,41757,130,807 - 57,131,971
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041769, LOC100041799
Downstream geneLOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210G11.bB6Ng01-210G11.g
ACCGA028749GA028750
length3231,163
definitionB6Ng01-210G11.b B6Ng01-210G11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(91,684,383 - 91,684,417)(57,130,807 - 57,131,971)
sequence
tatgtcaacacaacacagtgatactagcacatgcaagtctattgctgtgc
tattcaaagtagccaagttatagagtaaacctatgtgtccatcagtaggt
gagtgaataaataaaatgctaaatggcagaacaaatacacaatgaaattt
tcttcagctaaaaagaaaaaaaaagttatagcattctatttgtaggaaaa
tgaatggaattggagattgcattaaatgaaataagccagacttggaaaca
taaaaactgcatgttttctctcatatgaggattctgagtttacaagtgtg
tgtgtgtgtgtgtgtgtgtgtgt

gaattcagttgggctgacatgcagtgagttgcttgtttgttttggaaagt
acatcttcaaagatttataagaggagtggatagcagatatttggtactta
gctaaaataaactctgagtgatattaacattaggttttattttgaaatga
taaactgctaccttttatctagctgatttcatatgtaactgagtaaggct
atggaatactgttcctccatgtgatttttctccctttgcaaaataaaatt
tctctctttgattttagtgtctgtgttcaatagtggctcatctggatcat
ggaagattttaacatctctgataacttctaagaacaataatagatttcaa
atggattctctggataaaacagattcctagcactgttataaaagttacag
gcacttggtagtggagaaattgtgaaatgtgagttaataatgaagcaata
tccttggtatgacatgaaacctaatggcacagcacgtatctctggaaatc
gtcaatatataaatagtcgttgagttcattctactctgtctttctgatgt
tcagggaagggaagacactgttctttatgtactcatcatgacttgacttc
cagcacattttccctatattttatctcccttcccctatctatgtaatgtt
catattcactgatttgtgaaacacagggttcctcacaatgaagtaagcac
attttttttttttgtttttgaaattgatagcaatttaagagttgaaagaa
atgacatctttctcttctttttcctcctcctcctcctccccccccccctc
tttctccgagtcatcaaacatatgtgttaactggggtgattaatcatagc
acaatggtagtcactctacttaaatacactcatttataaatctgcttcta
gagttgaattttctggaaaagctaaggatttgttttagttgttggtaatg
gtcatcagtaaacctatgggtttattaagatttaaatattgctacaaatt
tattttcacctcatgaattaattaggaagaaatattgggaatgagggttg
tgggtcacctataattttaatattttgataacatggtcaagtgtactctt
cagcctaggcagctgtcgacataatgccactgaaggctagcactgtggtg
ctgcctctccgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91684383_91684417
seq2: B6Ng01-210G11.b_338_370 (reverse)

seq1  ACACACACACACACACACACATACACACACTTGTA  35
        ||||||||||||||||||| |||||||||||||
seq2  --ACACACACACACACACACACACACACACTTGTA  33


seq1: chr15_57130807_57131971
seq2: B6Ng01-210G11.g_63_1225 (reverse)

seq1  TTCGGAGAAGCAGCACCACAGGTGGCCTCGCC-TCAGTGGCATATGGTCT  49
      |||||||| ||||||||||| |||  || ||| ||||||||||   ||| 
seq2  TTCGGAGAGGCAGCACCACA-GTG--CTAGCCTTCAGTGGCATTATGTC-  46

seq1  GAACCAGCCTGCCTAGGCTGAAGGAGGTTACACTTGACCATTGTTATAAA  99
      ||  ||| |||||||||||||| |||  |||||||||||| |||||| ||
seq2  GA--CAG-CTGCCTAGGCTGAA-GAG--TACACTTGACCA-TGTTATCAA  89

seq1  AATTATAAAAATTATAGTTGACCCACAAACCTCATT-CCAATATTTTCTC  148
      || ||| |||||||||| |||||||||| ||||||| |||||||||  ||
seq2  AA-TATTAAAATTATAGGTGACCCACAACCCTCATTCCCAATATTTCTTC  138

seq1  CTAATTAAATCATGAGGTG-AAATAAATTTGTAGC-ATATTTAAATCTT-  195
      |||||||| |||||||||| ||||||||||||||| ||||||||||||| 
seq2  CTAATTAATTCATGAGGTGAAAATAAATTTGTAGCAATATTTAAATCTTA  188

seq1  ATAAA-CCATAGGTTTACTGATGACCA-TACCAAC-ACTAAAACAAAT-C  241
      ||||| ||||||||||||||||||||| ||||||| |||||||||||| |
seq2  ATAAACCCATAGGTTTACTGATGACCATTACCAACAACTAAAACAAATCC  238

seq1  TTAGCTTTTCCAGAAAATTCAACTCTAGAAGCAGATTTATAAATGAGTGT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTTCCAGAAAATTCAACTCTAGAAGCAGATTTATAAATGAGTGT  288

seq1  ATTTAAGTAGAGTGACTACCATTGTGCTATGATTAATCACCCCAGTTAAC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTAGAGTGACTACCATTGTGCTATGATTAATCACCCCAGTTAAC  338

seq1  ACATATGTTTGATGACTCGGAGAAAGA-GGGGGGGGGGAGGAGGAGGAGG  390
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACATATGTTTGATGACTCGGAGAAAGAGGGGGGGGGGGAGGAGGAGGAGG  388

seq1  AGGAAAAAGAAGAGAAAGATGTCATTTCTTTCAACTCTTAAATTGCTATC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGAAGAGAAAGATGTCATTTCTTTCAACTCTTAAATTGCTATC  438

seq1  AATTTCAAAAACAAAAAAAAAAAATGTGCTTACTTCATTGTGAGGAACCC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAAAAACAAAAAAAAAAAATGTGCTTACTTCATTGTGAGGAACCC  488

seq1  TGTGTTTCACAAATCAGTGAATATGAACATTACATAGATAGGGGAAGGGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCACAAATCAGTGAATATGAACATTACATAGATAGGGGAAGGGA  538

seq1  GATAAAATATAGGGAAAATGTGCTGGAAGTCAAGTCATGATGAGTACATA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATATAGGGAAAATGTGCTGGAAGTCAAGTCATGATGAGTACATA  588

seq1  AAGAACAGTGTCTTCCCTTCCCTGAACATCAGAAAGACAGAGTAGAATGA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGTGTCTTCCCTTCCCTGAACATCAGAAAGACAGAGTAGAATGA  638

seq1  ACTCAACGACTATTTATATATTGACGATTTCCAGAGATACGTGCTGTGCC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACGACTATTTATATATTGACGATTTCCAGAGATACGTGCTGTGCC  688

seq1  ATTAGGTTTCATGTCATACCAAGGATATTGCTTCATTATTAACTCACATT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTTTCATGTCATACCAAGGATATTGCTTCATTATTAACTCACATT  738

seq1  TCACAATTTCTCCACTACCAAGTGCCTGTAACTTTTATAACAGTGCTAGG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTTCTCCACTACCAAGTGCCTGTAACTTTTATAACAGTGCTAGG  788

seq1  AATCTGTTTTATCCAGAGAATCCATTTGAAATCTATTATTGTTCTTAGAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTTTATCCAGAGAATCCATTTGAAATCTATTATTGTTCTTAGAA  838

seq1  GTTATCAGAGATGTTAAAATCTTCCATGATCCAGATGAGCCACTATTGAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCAGAGATGTTAAAATCTTCCATGATCCAGATGAGCCACTATTGAA  888

seq1  CACAGACACTAAAATCAAAGAGAGAAATTTTATTTTGCAAAGGGAGAAAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACACTAAAATCAAAGAGAGAAATTTTATTTTGCAAAGGGAGAAAA  938

seq1  ATCACATGGAGGAACAGTATTCCATAGCCTTACTCAGTTACATATGAAAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGGAGGAACAGTATTCCATAGCCTTACTCAGTTACATATGAAAT  988

seq1  CAGCTAGATAAAAGGTAGCAGTTTATCATTTCAAAATAAAACCTAATGTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGATAAAAGGTAGCAGTTTATCATTTCAAAATAAAACCTAATGTT  1038

seq1  AATATCACTCAGAGTTTATTTTAGCTAAGTACCAAATATCTGCTATCCAC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACTCAGAGTTTATTTTAGCTAAGTACCAAATATCTGCTATCCAC  1088

seq1  TCCTCTTATAAATCTTTGAAGATGTACTTTCCAAAACAAACAAGCAACTC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTATAAATCTTTGAAGATGTACTTTCCAAAACAAACAAGCAACTC  1138

seq1  ACTGCATGTCAGCCCAACTGAATTC  1165
      |||||||||||||||||||||||||
seq2  ACTGCATGTCAGCCCAACTGAATTC  1163


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