BAC Information

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BAC

Clone NameB6Ng01-210L01
Chromosome10 (Build37)
Map Location 92,145,714 - 92,146,886
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041799, LOC667203, LOC216229, LOC100041814
Downstream geneNedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210L01.bB6Ng01-210L01.g
ACCGA028963GA028964
length1,158500
definitionB6Ng01-210L01.b B6Ng01-210L01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcaaatatttaaagaaaacagcaagtactaaacaagtgctta
cagtattatgaaaccggggtgtgatacccaactcaaaaaagccagcaaca
ccctgctactgaaaggagacagcatccggacaatcccacatcacatttta
atagttcaaatccagcagtccattaaatgatattgctaaaggcaatttct
taaaggtgcaaacttgggataatgaagaaatctaagaaaagactatcaca
aagcaaacgttctttttgtagttgcagaagtatttgacagagccagcatt
cattcttgatttaaagcccaggtgcaagtgagtatacaaaagcctcattt
ctgtgtaagcaacatttaatgaggaagttaaatgccacttagaatagcat
acaaacatgagttattgaggaatagatttgatagaaagacccatgcactg
tactctccaatgagaaggtaaactttataagtgtggcatgcacatcagga
gttaaaaccctcagtactgtgaaatgtccagatatataaaaatatgtgtc
aaatatgtgaaaatatttgaataaccaaagagtctagggaaaatagcact
ttggttttatatttcataattcctcattaaaagctacaactagccaagat
aacaggtaaatgtaaatataatcacatcaataaggtataataaagcccaa
aagtagattcttattctggcacacacactcatacatatgttatgggcagc
ccaccagaaatgacctaagtttatagccaattgagagtctttgctccaat
tggctgggaacacacttagatatttcgaacccaagtatagtactgggcat
ttagagtaaggttttttttaggccaaaaccacaccctaacatcccacttg
gcagctataggaggaggtttgcacagcaagcagttaacagaagctaaagt
aagcagatagctgaagaaggaggtttgcccaagccgacaatcagaagcta
agataagttagctggggaatctggatttttagaaaaaagtggtaacttcc
tgtgggctccatcaggaactaactgtagtaacttaaatggatctcagcta
agtataccagatgcgaaacctcagcactgtcctagtcattacatactatt
tatcaacc
gaattctttgttcagttctgagccccatttttaatggggttttagcccca
aacctaggatacccaagatataagatataatttgctaaacacatgaaact
caagaagaatgaagactgaagtgtggacactatgcccctccttagatttg
ggaacaaaacacccatggaaggagttacagagacggagtttggagctgag
atgaaaggatggaccatgtagagactgccatatccagggatccaccccat
aatcagcatccaaacgctgacaccattgcatacactagcaagattttatt
gaaaggacgcagatgtagctgtctcttgtgagactatgccggggcccagc
aaacacagaagtggatgctcacagtcagctaatggatggatcatagggct
cccaatggaggagctagagaaaatagccaaggagctaaagggatctgcaa
ccctataggtggaacaacattatgagctaaccagtaccccggagctcttg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_92145714_92146886
seq2: B6Ng01-210L01.b_44_1200 (reverse)

seq1  GTTGATAAATATGTATGATAGGACTA-GACAGTGCTGAGGTTCCCGCATC  49
      ||||||||||| |||||  | ||||| |||||||||||||||  ||||||
seq2  GTTGATAAATA-GTATGTAATGACTAGGACAGTGCTGAGGTT-TCGCATC  48

seq1  TTGTATACTT-GCTGAGATCCATTTTAGGTTTAACTACAGTTTGGTCTCC  98
      | |||||||| |||||||||||||| ||   | ||||||||| |   | |
seq2  TGGTATACTTAGCTGAGATCCATTTAAG---TTACTACAGTTAG---TTC  92

seq1  TTGATGGGAAGCCCACAGAAAATTACCCAACTTTTTTCTAAAAATCCAAG  148
       ||||||  ||||||||| || |||||  |||||||||||||||||| ||
seq2  CTGATGG--AGCCCACAGGAAGTTACC--ACTTTTTTCTAAAAATCC-AG  137

seq1  ATTCCCCAGCTAACTTATCTTAGCTTCTGATTGTCCGCTTGGGCAAAACC  198
      ||||||||||||||||||||||||||||||||||| |||||||| |||||
seq2  ATTCCCCAGCTAACTTATCTTAGCTTCTGATTGTCGGCTTGGGC-AAACC  186

seq1  TCCTTCTTCAGCTATCTGCTTACCTTAGCTTCTGTTAAACTGCTTGCTTG  248
      ||||||||||||||||||||||| |||||||||||| |||||||||| ||
seq2  TCCTTCTTCAGCTATCTGCTTACTTTAGCTTCTGTT-AACTGCTTGC-TG  234

seq1  TGCAAAACCTCCTCCTATAGCTGCCAAGTGGGATGTTAGGGTGTGGTTTT  298
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGC-AAACCTCCTCCTATAGCTGCCAAGTGGGATGTTAGGGTGTGGTTTT  283

seq1  GGCCTAAAAAAAAACCTTACTCTAAATGCCCAGTACTATACTTGGGTTCG  348
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCT-AAAAAAAACCTTACTCTAAATGCCCAGTACTATACTTGGGTTCG  332

seq1  AAATATCTAAGTGTGTTCCCAGCCAATTGGAGCAAAGACTCTCAATTGGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTAAGTGTGTTCCCAGCCAATTGGAGCAAAGACTCTCAATTGGC  382

seq1  TATAAACTTAGGTCATTTCTGGTGGGCTGCCCATAACATATGTATGAGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTTAGGTCATTTCTGGTGGGCTGCCCATAACATATGTATGAGTG  432

seq1  TGTGTGCCAGAATAAGAATCTACTTTTGGGCTTTATTATACCTTATTGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCCAGAATAAGAATCTACTTTTGGGCTTTATTATACCTTATTGAT  482

seq1  GTGATTATATTTACATTTACCTGTTATCTTGGCTAGTTGTAGCTTTTAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTATATTTACATTTACCTGTTATCTTGGCTAGTTGTAGCTTTTAAT  532

seq1  GAGGAATTATGAAATATAAAACCAAAGTGCTATTTTCCCTAGACTCTTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATTATGAAATATAAAACCAAAGTGCTATTTTCCCTAGACTCTTTG  582

seq1  GTTATTCAAATATTTTCACATATTTGACACATATTTTTATATATCTGGAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCAAATATTTTCACATATTTGACACATATTTTTATATATCTGGAC  632

seq1  ATTTCACAGTACTGAGGGTTTTAACTCCTGATGTGCATGCCACACTTATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACAGTACTGAGGGTTTTAACTCCTGATGTGCATGCCACACTTATA  682

seq1  AAGTTTACCTTCTCATTGGAGAGTACAGTGCATGGGTCTTTCTATCAAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTACCTTCTCATTGGAGAGTACAGTGCATGGGTCTTTCTATCAAAT  732

seq1  CTATTCCTCAATAACTCATGTTTGTATGCTATTCTAAGTGGCATTTAACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCTCAATAACTCATGTTTGTATGCTATTCTAAGTGGCATTTAACT  782

seq1  TCCTCATTAAATGTTGCTTACACAGAAATGAGGCTTTTGTATACTCACTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTAAATGTTGCTTACACAGAAATGAGGCTTTTGTATACTCACTT  832

seq1  GCACCTGGGCTTTAAATCAAGAATGAATGCTGGCTCTGTCAAATACTTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGGGCTTTAAATCAAGAATGAATGCTGGCTCTGTCAAATACTTCT  882

seq1  GCAACTACAAAAAGAACGTTTGCTTTGTGATAGTCTTTTCTTAGATTTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTACAAAAAGAACGTTTGCTTTGTGATAGTCTTTTCTTAGATTTCT  932

seq1  TCATTATCCCAAGTTTGCACCTTTAAGAAATTGCCTTTAGCAATATCATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATCCCAAGTTTGCACCTTTAAGAAATTGCCTTTAGCAATATCATT  982

seq1  TAATGGACTGCTGGATTTGAACTATTAAAATGTGATGTGGGATTGTCCGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGACTGCTGGATTTGAACTATTAAAATGTGATGTGGGATTGTCCGG  1032

seq1  ATGCTGTCTCCTTTCAGTAGCAGGGTGTTGCTGGCTTTTTTGAGTTGGGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTCTCCTTTCAGTAGCAGGGTGTTGCTGGCTTTTTTGAGTTGGGT  1082

seq1  ATCACACCCCGGTTTCATAATACTGTAAGCACTTGTTTAGTACTTGCTGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACCCCGGTTTCATAATACTGTAAGCACTTGTTTAGTACTTGCTGT  1132

seq1  TTTCTTTAAATATTTGAAAGAATTC  1173
      |||||||||||||||||||||||||
seq2  TTTCTTTAAATATTTGAAAGAATTC  1157