BAC Information

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BAC

Clone NameB6Ng01-210M15
Chromosome10 (Build37)
Map Location 81,282,531 - 81,283,682
singlet/doubletsinglet
Overlap geneEG210583
Upstream geneOaz1, BC072620, Lsm7, 3110056O03Rik, Tmprss9, Timm13, Lmnb2, Gadd45b, Gng7, LOC100042403, Diras1, Slc39a3, Sgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2, Dapk3, Itgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG666738
Downstream geneEG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210M15.bB6Ng01-210M15.g
ACCGA029035GA029036
length1,1381,176
definitionB6Ng01-210M15.b B6Ng01-210M15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaggcattgcaagagagatgactattaacagacaatacaga
gagacactcaaacagatcagtgctactgaatatacagcagcataattgta
tcaaaatccctaacttcaaaaaaggatagacaaaatgtttaatatgctca
gtagatactggccattaaacctgtctgagatctgctgagtatggcattta
agaagtttaaaactatcatgacagagactcttaggtcctagcaatgaccc
tcaaggtctccaaaaagacaactgacacagcaacaaaggactccacctgg
attgtggtaacattaactggtaatggccatgcatcatctgcagggtacgc
atttgattgcttcgctgatgggccgtttctgtggcaaggcccatggaaaa
cgcttcccacttgtccatgtggcaaggacatgtggtgaattttggtggcc
cactgcttattacctaggtcatatatgctacaaggtctctttgcttttgc
tatgctgtttatactcatagcaatatttagtttcactttgtgggtcatgg
acaaagccaagattatgcagactgaaagccctgtggatgattctatattt
ttctaaatactcattctagaggcaaaaccctcctctcctctctctatcac
gcttctacttgtgaccattaatcctgagtattttgggacatataattgtg
tcactagagatactgctacagtcacactgaggaagtctgtggcaacccca
ggcttgtgaagaagagtatgtcctgcttgcataactgttctgaggaagat
atgtctgaacaagagacttaaaatgggtaagctgtctggtcaactgagac
ttaaaagataaggaagctctgtctgatcaatagaaaattaaaatatgatt
cccggaaagattgatagtatcagaaattgataggtgcacatgagggaaga
aggtgacttagtaaatgagcacatctttgtcttcagtttaaaagtatttt
gacagagggtggtatctgatgactggacttataatcaggagtgttatctg
tctatcactgcatacctgtgtaatgcattgctacagctgtttggtgctca
tatccacagtcatgctggctagacattatttttggctt
gaattcagtgggcccagaaatgagagatgtgatcctccttttctgtttcc
ttctaaaagcacttggagacttcatttgaaattctgtgatctggaataaa
tgtgtggagcacccagaattatataaatatattctcagtggaatgtacat
ttacagtgcagccagtctcactatttttattatgtatacgtatgggctat
tttaggatgcggtgacctatgaggatgtgtatgtgaaattcactcatgaa
gagtgggctttgctggatccatcccagaagagtctctacaaagatgtgat
gctggagacatgcaggaacctcactgctataggtaagaatatgagttttc
cttcactttctaaacaaggggacaatgtttcttggttattggtgcacttc
tgtgatttctcttgtgacagaggaagaatgtggtgactattgagacatga
ttctcgggtttaccaaagatactaacttaaaactgcatactatccaataa
tatatcataaattttctggtactatattttaggttacaaattggaagatg
acaacattgaagaacactgtcacagttccggaggacgtggaaggtaaatt
tcatgtgcaagctgatagaggtgcatcactgaggaagttttaatgtgccc
tgaagttgtaaagagaagcagtagtgggaataagcacagctttatgtata
ttaatgaggattaaattctcacaaggctgtgtacttcagtttcaggtagc
taacctgtgtctgcaaggcaaacttacaataaacacagaaatcatacctt
aacacatgataatagtttagtcataggcctgtgagatgtgttgtagaact
gtcaacccatttagtttcatcctattcaattttaacaaaaagcatgcaca
ttgattggggacccgtgaatgtccgagaacttttataaacaaatagtcgc
ttcaaagtttagtgagaagaacagtttatgggaggcagaatgctgatgtc
atggagaaatcttaatccttaatagcacatatctgtggggaccagactca
actatatgatatttggaaactttggttgttatttctcctttatagtatac
atctatattgcagattcagctgcactaggaccagcagaggcatggttact
ttgtggcaccataaaagccgttactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81282531_81283682
seq2: B6Ng01-210M15.b_44_1181 (reverse)

seq1  AAGCCAAAAATAAATGTCTAGCCAGGCATGACCTGTGGATATGAGCACAA  50
      ||||||||||| |||||||||||| |||||| |||||||||||||||| |
seq2  AAGCCAAAAAT-AATGTCTAGCCA-GCATGA-CTGTGGATATGAGCACCA  47

seq1  ACCAAGCTGGTAGCAAATGCCATTACACAGTTATGCAAGGTGATAGACAG  100
      | | |||| ||||| |||| |||||||||| ||||||  |||||||||||
seq2  AAC-AGCT-GTAGC-AATG-CATTACACAGGTATGCA--GTGATAGACAG  91

seq1  ATTAAACACTCCTGATTATAAGTCCAGTCATCAGATACCACCCCTCTGTC  150
      ||  |||||||||||||||||||||||||||||||||||| |||||||||
seq2  AT--AACACTCCTGATTATAAGTCCAGTCATCAGATACCA-CCCTCTGTC  138

seq1  AAAATACTTTTTAAACTGAAGACAAAGATGTGCTCATTTTACTAAGTCAC  200
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  AAAATAC-TTTTAAACTGAAGACAAAGATGTGCTCA-TTTACTAAGTCAC  186

seq1  CTTCTTCCCTCATGTGCACCTATCAATTTCTGATACTATCAATCTTTCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCCTCATGTGCACCTATCAATTTCTGATACTATCAATCTTTCCG  236

seq1  GGAATCATATTTTAATTTTCTATTGATCAGACAGAGCTTCCTTATCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCATATTTTAATTTTCTATTGATCAGACAGAGCTTCCTTATCTTTT  286

seq1  AAGTCTCAGTTGACCAGACAGCTTACCCATTTTAAGTCTCTTGTTCAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCAGTTGACCAGACAGCTTACCCATTTTAAGTCTCTTGTTCAGAC  336

seq1  ATATCTTCCTCAGAACAGTTATGCAAGCAGGACATACTCTTCTTCACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTCCTCAGAACAGTTATGCAAGCAGGACATACTCTTCTTCACAAG  386

seq1  CCTGGGGTTGCCACAGACTTCCTCAGTGTGACTGTAGCAGTATCTCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGTTGCCACAGACTTCCTCAGTGTGACTGTAGCAGTATCTCTAGT  436

seq1  GACACAATTATATGTCCCAAAATACTCAGGATTAATGGTCACAAGTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAATTATATGTCCCAAAATACTCAGGATTAATGGTCACAAGTAGAA  486

seq1  GCGTGATAGAGAGAGGAGAGGAGGGTTTTGCCTCTAGAATGAGTATTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGATAGAGAGAGGAGAGGAGGGTTTTGCCTCTAGAATGAGTATTTAG  536

seq1  AAAAATATAGAATCATCCACAGGGCTTTCAGTCTGCATAATCTTGGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAGAATCATCCACAGGGCTTTCAGTCTGCATAATCTTGGCTTT  586

seq1  GTCCATGACCCACAAAGTGAAACTAAATATTGCTATGAGTATAAACAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGACCCACAAAGTGAAACTAAATATTGCTATGAGTATAAACAGCA  636

seq1  TAGCAAAAGCAAAGAGACCTTGTAGCATATATGACCTAGGTAATAAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAAGCAAAGAGACCTTGTAGCATATATGACCTAGGTAATAAGCAG  686

seq1  TGGGCCACCAAAATTCACCACATGTCCTTGCCACATGGACAAGTGGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCACCAAAATTCACCACATGTCCTTGCCACATGGACAAGTGGGAAG  736

seq1  CGTTTTCCATGGGCCTTGCCACAGAAACGGCCCATCAGCGAAGCAATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTCCATGGGCCTTGCCACAGAAACGGCCCATCAGCGAAGCAATCAA  786

seq1  ATGCGTACCCTGCAGATGATGCATGGCCATTACCAGTTAATGTTACCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTACCCTGCAGATGATGCATGGCCATTACCAGTTAATGTTACCACA  836

seq1  ATCCAGGTGGAGTCCTTTGTTGCTGTGTCAGTTGTCTTTTTGGAGACCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGTGGAGTCCTTTGTTGCTGTGTCAGTTGTCTTTTTGGAGACCTT  886

seq1  GAGGGTCATTGCTAGGACCTAAGAGTCTCTGTCATGATAGTTTTAAACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCATTGCTAGGACCTAAGAGTCTCTGTCATGATAGTTTTAAACTT  936

seq1  CTTAAATGCCATACTCAGCAGATCTCAGACAGGTTTAATGGCCAGTATCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATGCCATACTCAGCAGATCTCAGACAGGTTTAATGGCCAGTATCT  986

seq1  ACTGAGCATATTAAACATTTTGTCTATCCTTTTTTGAAGTTAGGGATTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCATATTAAACATTTTGTCTATCCTTTTTTGAAGTTAGGGATTTT  1036

seq1  GATACAATTATGCTGCTGTATATTCAGTAGCACTGATCTGTTTGAGTGTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAATTATGCTGCTGTATATTCAGTAGCACTGATCTGTTTGAGTGTC  1086

seq1  TCTCTGTATTGTCTGTTAATAGTCATCTCTCTTGCAATGCCTTATGGAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTATTGTCTGTTAATAGTCATCTCTCTTGCAATGCCTTATGGAAT  1136

seq1  TC  1152
      ||
seq2  TC  1138