BAC Information

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BAC

Clone NameB6Ng01-210N02
Chromosome10 (Build37)
Map Location 99,542,659 - 99,543,825
singlet/doubletsinglet
Overlap geneKitl
Upstream geneWdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246
Downstream geneLOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210N02.bB6Ng01-210N02.g
ACCGA029053GA029054
length1,156899
definitionB6Ng01-210N02.b B6Ng01-210N02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagtattttcaatagatccattgatgcctttaaggactttat
ggtggcatctgacactagtgactgtgtgctctcttcaacattaggtcccg
agaaaggtaaggcattcaagcatttcctgtttcactgttcgtagtaagat
tgaacttttataagcttcccctgctggatgaactgaatgtgttgctagag
aaagaatttgtgtgtttttctgataaaaaaataaaagcagatatcaatga
ctgccaatgatgttcatcgagcatgagagatacatccgtttctaagacag
caagactcaatatttctgaattgaagaattgtgtgagttaacaatacatg
atggtggctcacaggttttctcactctgatatttgctaggagaatagaat
gatgtcattcctcatccccagcatcccttaatgttcatgtctcatacctt
ttccttaagggtctatctctgagacttgagttctgagcctcaccagttca
ttctggatcccaactctccctgagctgggtccctatgatggaactaactt
cattgctttcctttaaaatcatgatgggctaccaccagctcttcactatt
cacgtttctaagcatggtattgtatgcaataagccatcactccaagatga
ctatggcacatctcttgacaaaactgagcagctgaactgagtatgaaata
aataggaactgcataacctagacttgggaggcagacccagcacatacagt
gatattgcacttcgcctttgggggactctgtgattcatataaatcaccat
gtaacactgacacattattgctttctatttagattccagagtcagtgtca
caaaaccatttatgttaccccctgttgcagccagctcccttaggaatgac
agcagtagcagtaatagtaagtacacgtatctgatttaatgcatgcatgg
ctccaagtatccctataggagtgttgcatggacttaaaccaagtttataa
tgatactaataatactgtctgtgctgtattccttgtatggtcttcctgac
attaaattttcttgtttggagaatcggatctccctgagatatgagaccat
gacgaattaggcattaaacctttctgctaaagtattttttaataggtacg
aaatta
gaattctttatatactttggatattagtcctgcattgaatgtggagttgg
tataaatattttcccattctgtaggctgctgctttgtctagatgacagtg
tccttttccttaaagaagctttcctgtttcatgaggtaacgtttattaat
tgatgatcttagtgtctgctctattggtgttctgttcaggacattttctc
ctgtgtcaatgttttcaaaacttctcccaactttctcttctatcaggttc
agtgtgtctggttttattttgaggactttttgccacgtagaattattttg
tgtggcttattaagtatagatttatttgaattcttatacataaagaaatc
aagtttgttgaaggtgctcttttttggttctagtgtgcatttctggcttt
attataaaacaatgggtatccattggtgtgtggatttatgtcttcatatt
caattcaattccattgataaacctgtgtgcttttatgctgacatattaca
gttttcattactatagctctccagggcaacttgaaatcaagaatgctatt
acccataggactttagttgttttaactatcctgttgggttttttttttgg
tatgtttgtgtgtttgttttctgttcttccaccaaaagttggaaattgtc
ctttcaaagtctgtaacatattatgttagaattccagtatgcatggtcat
tttttgctatattgatcttatcaaacaatgagcataggagatatgtccat
cttctgacaaactgtcttcttcaatgtctttcttcaaagacttaaagatt
tttatcatacaaaatctttcatttctttgatgagagtttcccaagacatt
ttgtatgatcctggaagctattgtggaagatattttttttctatatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_99542659_99543825
seq2: B6Ng01-210N02.b_44_1199

seq1  GAATTCTTTAGTATTTTCAATAGATCCATTGATGCCTTTAAGGACTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGTATTTTCAATAGATCCATTGATGCCTTTAAGGACTTTAT  50

seq1  GGTGGCATCTGACACTAGTGACTGTGTGCTCTCTTCAACATTAGGTCCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCATCTGACACTAGTGACTGTGTGCTCTCTTCAACATTAGGTCCCG  100

seq1  AGAAAGGTAAGGCATTCAAGCATTTCCTGTTTCACTGTTCGTAGTAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTAAGGCATTCAAGCATTTCCTGTTTCACTGTTCGTAGTAAGAT  150

seq1  TGAACTTTTATAAGCTTCCCCTGCTGGATGAACTGAATGTGTTGCTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTTATAAGCTTCCCCTGCTGGATGAACTGAATGTGTTGCTAGAG  200

seq1  AAAGAATTTGTGTGTTTTTCTGATAAAAAAATAAAAGCAGATATCAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTTGTGTGTTTTTCTGATAAAAAAATAAAAGCAGATATCAATGA  250

seq1  CTGCCAATGATGTTCATCGAGCATGAGAGATACATCCGTTTCTAAGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAATGATGTTCATCGAGCATGAGAGATACATCCGTTTCTAAGACAG  300

seq1  CAAGACTCAATATTTCTGAATTGAAGAATTGTGTGAGTTAACAATACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTCAATATTTCTGAATTGAAGAATTGTGTGAGTTAACAATACATG  350

seq1  ATGGTGGCTCACAGGTTTTCTCACTCTGATATTTGCTAGGAGAATAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGCTCACAGGTTTTCTCACTCTGATATTTGCTAGGAGAATAGAAT  400

seq1  GATGTCATTCCTCATCCCCAGCATCCCTTAATGTTCATGTCTCATACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCATTCCTCATCCCCAGCATCCCTTAATGTTCATGTCTCATACCTT  450

seq1  TTCCTTAAGGGTCTATCTCTGAGACTTGAGTTCTGAGCCTCACCAGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAAGGGTCTATCTCTGAGACTTGAGTTCTGAGCCTCACCAGTTCA  500

seq1  TTCTGGATCCCAACTCTCCCTGAGCTGGGTCCCTATGATGGAACTAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGATCCCAACTCTCCCTGAGCTGGGTCCCTATGATGGAACTAACTT  550

seq1  CATTGCTTTCCTTTAAAATCATGATGGGCTACCACCAGCTCTTCACTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTTCCTTTAAAATCATGATGGGCTACCACCAGCTCTTCACTATT  600

seq1  CACGTTTCTAAGCATGGTATTGTATGCAATAAGCCATCACTCCAAGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTTCTAAGCATGGTATTGTATGCAATAAGCCATCACTCCAAGATGA  650

seq1  CTATGGCACATCTCTTGACAAAACTGAGCAGCTGAACTGAGTATGAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCACATCTCTTGACAAAACTGAGCAGCTGAACTGAGTATGAAATA  700

seq1  AATAGGAACTGCATAACCTAGACTTGGGAGGCAGACCCAGCACATACAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAACTGCATAACCTAGACTTGGGAGGCAGACCCAGCACATACAGT  750

seq1  GATATTGCACTTCGCCTTTGGGGGACTCTGTGATTCATATAAATCACCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGCACTTCGCCTTTGGGGGACTCTGTGATTCATATAAATCACCAT  800

seq1  GTAACACTGACACATTATTGCTTTCTATTTAGATTCCAGAGTCAGTGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACTGACACATTATTGCTTTCTATTTAGATTCCAGAGTCAGTGTCA  850

seq1  CAAAACCATTTATGTTACCCCCTGTTGCAGCCAGCTCCCTTAGGAATGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATTTATGTTACCCCCTGTTGCAGCCAGCTCCCTTAGGAATGAC  900

seq1  AGCAGTAGCAGTAATAGTAAGTACACGTATCTGATTTAATGCATGCATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAGCAGTAATAGTAAGTACACGTATCTGATTTAATGCATGCATGG  950

seq1  CTCCAAGTATCCCCTATAGGAGTGTTGCATGGACTTAAACCAAGTTTATA  1000
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  CTCCAAGTAT-CCCTATAGGAGTGTTGCATGGACTTAAACCAAGTTTAT-  998

seq1  AATGATTACTAATAATACTGTTCTGTTGCTGTTATTCCTTGTATGGTCTT  1050
      ||||| |||||||||||||| |||| ||||| ||||||||||||||||||
seq2  AATGA-TACTAATAATACTG-TCTG-TGCTG-TATTCCTTGTATGGTCTT  1044

seq1  CCTGACAATTAAATATCTGGTTTGGAGAATCGGATCTCCCTGGAGGTTAT  1100
      ||||||| | || | ||| |||||||||||||||||||||||   | |||
seq2  CCTGACATTAAATTTTCTTGTTTGGAGAATCGGATCTCCCTG--AGATAT  1092

seq1  GAAGACCATGAAGGAATTAGGCCAATAAA-CTTTCTGCTAAGGTTATTTT  1149
      | |||||||| | |||||||| || |||| ||||||||||| ||  ||||
seq2  G-AGACCATG-ACGAATTAGG-CATTAAACCTTTCTGCTAAAGTATTTTT  1139

seq1  AAATAAGGTACGAAATTA  1167
       ||| |||||||||||||
seq2  TAAT-AGGTACGAAATTA  1156