BAC Information

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BAC

Clone NameB6Ng01-211F07
Chromosome10 (Build37)
Map Location 49,745,575 - 49,746,731
singlet/doubletsinglet
Overlap genenone
Upstream geneGrik2
Downstream geneLOC629652, Ascc3, Sim1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211F07.bB6Ng01-211F07.g
ACCGA029427GA029428
length1,1401,190
definitionB6Ng01-211F07.b B6Ng01-211F07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctttcacgcatcagaatggctaacatcgacaaaatgagtgag
cctttatgctgttgagaatgagaagtaaggagaacatttacccgttcatt
gttttggggagtacaaagtataggtactgtggaaatcaatgtagcatttc
ctcaggaagattggaatcaatctacttcaagatccagctattgggcttgc
atccaaaggatatttcattctataacatggacacttcctcagttatgttc
atcagtgttccattcatagtaacaaggaatacatacaacctacatgttac
tcaaaagaataggtaatgaaaagacaatgaaactatcaaaaacagaaaaa
atgaaatattaaaattcacaggtaaattgtagcatgcaattttaggaggc
acacttgcctggtctccttgccctgtgctgcagcccctcaaaatttagtt
ctcagatcatgccaccactgctggctccacttccatactgcccatatccc
ctggaaaacacctggagctatccccatcccccactaccacactgtggctg
attcttctgactgccaactaccacactggtctcacttagcttccatgcta
gctctccttgtctctgcttgctgcttgcccgataccacaatgtctgctta
cccagatccctttagccttgtggaaggaaaacactagaaacctttatatt
tggaattgagtttcatcttattaaatttttggccaaagagatccaatggg
aaaacctaaacaacccaagctgttgccaaggtgataggttcctctccaca
aacagacaataagaacccattgttaaatgcaacaactatggtaaccattg
aatatggagaagtggagcctacatgcaaccttcactcttatactctctca
tctgtggtgcagatacttattctgctggctactgaattacaaaaaataaa
caccaagccagtcaccaaatagaaaaataagcttcaagccactcacaaag
cctttgatctacatgtgtctatactagatagttcaggctctagggtaaac
caaatactactatcaaaaatattttagaatgactctatgcatctgctata
cctatagatcagtcatataaggaaggctcatctgaagcat

gaattccttcgcatccaaatgttaaaattttaaaaataaaaagcatgatt
taaataatgtgtacagggatatattcccccccttttcattttttatgaag
atattgttttaaagttccaatggcctgttccacaatgccccgtcctttgg
gataagataataaggaaatatgagtaaaatccttttaccattattgatta
ggtatgactccttaaggattaacaccattatgtggtacatgaagaaattg
aggacactgagagcaaatctttacaatttgatctgcacattctctagaaa
tagcaaattatcgtctcaagctattactattttgatgatgtaaagaatga
gattgtatggccaattgttcctgtaaggcctatactctgcctggtatata
aatttgctgtggcattgcccaggggtccaggcaatccactgttagctctt
aaatgtcttataaagtaaggaacagtgtatgtttcttaaattaaattgta
tttgtataaataactgtgaaatttgaaaagtagcagtatctaaaaatgga
aaaagttcaaggaattgtaaatgatgagctatatattggctatcagtata
taaattaaaagcttgaatcttcaatattttaaaaacaatagctacaatac
gtaattcaattatttgtgaagcaaggggaaacttgagagaataaacatgt
gacccaataacatatgcttctcttcaattagatgagatgtttataaatac
agtaaatgcattctttatcagcttcatgaataaatttacaagaaatacaa
aagtatgtatagaggcaaattctaacatcttgtcttttgaataatgatta
ttaaatttgcctaaaatctttgctatgcaataagccaaatatcagtattc
tgtaataatgaaattaattgatgcttaatacagaatagatattttatcag
ttcttaagaaaagaaaaatattactaccaacttactcagtgaacagatta
taccacagaatcattgaccaaaatcagcacctagaaggaaaataacacat
tcttctaacaaaaaaagctttccatttaactcagattactagaaaaaaaa
tgaagctatgaccatagattgatctgtacgaagcacttagatgtttaaca
cctgttgaatttacccagatcagtaacggcggaaccactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_49745575_49746731
seq2: B6Ng01-211F07.b_46_1185 (reverse)

seq1  ATGCTTCAGGATGAAGCTTCTCTTATAATGACTGATCTATAAGTATAGCA  50
      |||||||| |||||  |||| ||||| |||||||||||||| ||||||||
seq2  ATGCTTCA-GATGAGCCTTC-CTTAT-ATGACTGATCTATAGGTATAGCA  47

seq1  GAATGCCATTAGAAGTCATTTTCTTAAAATATTTTTGAATAGTAGTATTT  100
      | ||||   ||| |||||||    ||||||||||||| ||||||||||||
seq2  G-ATGC--ATAG-AGTCATT---CTAAAATATTTTTG-ATAGTAGTATTT  89

seq1  GGTTTTACCCTAGAGCCCTGAACTATCTAGTATAAGACACCATTGTAGAT  150
      || |||||||||||| ||||||||||||||||| ||||||   |||||||
seq2  GG-TTTACCCTAGAG-CCTGAACTATCTAGTAT-AGACAC--ATGTAGAT  134

seq1  CAAAGGCTTTGTGAGTGGCTTGAAGCTTATTTTTCTATTTTGGTGACTGG  200
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAAAGGCTTTGTGAGTGGCTTGAAGCTTATTTTTCTA-TTTGGTGACTGG  183

seq1  CTTGGTGTTTATTTTTTGTAATTCAGTAGCCAGCAGAATAAGTATCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGTTTATTTTTTGTAATTCAGTAGCCAGCAGAATAAGTATCTGCA  233

seq1  CCACAGATGAGAGAGTATAAGAGTGAAGGTTGCATGTAGGCTCCACTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGATGAGAGAGTATAAGAGTGAAGGTTGCATGTAGGCTCCACTTCT  283

seq1  CCATATTCAATGGTTACCATAGTTGTTGCATTTAACAATGGGTTCTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTCAATGGTTACCATAGTTGTTGCATTTAACAATGGGTTCTTATT  333

seq1  GTCTGTTTGTGGAGAGGAACCTATCACCTTGGCAACAGCTTGGGTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTGTGGAGAGGAACCTATCACCTTGGCAACAGCTTGGGTTGTTT  383

seq1  AGGTTTTCCCATTGGATCTCTTTGGCCAAAAATTTAATAAGATGAAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCCCATTGGATCTCTTTGGCCAAAAATTTAATAAGATGAAACTC  433

seq1  AATTCCAAATATAAAGGTTTCTAGTGTTTTCCTTCCACAAGGCTAAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAAATATAAAGGTTTCTAGTGTTTTCCTTCCACAAGGCTAAAGGG  483

seq1  ATCTGGGTAAGCAGACATTGTGGTATCGGGCAAGCAGCAAGCAGAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGTAAGCAGACATTGTGGTATCGGGCAAGCAGCAAGCAGAGACAA  533

seq1  GGAGAGCTAGCATGGAAGCTAAGTGAGACCAGTGTGGTAGTTGGCAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCTAGCATGGAAGCTAAGTGAGACCAGTGTGGTAGTTGGCAGTCA  583

seq1  GAAGAATCAGCCACAGTGTGGTAGTGGGGGATGGGGATAGCTCCAGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATCAGCCACAGTGTGGTAGTGGGGGATGGGGATAGCTCCAGGTGT  633

seq1  TTTCCAGGGGATATGGGCAGTATGGAAGTGGAGCCAGCAGTGGTGGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGGGATATGGGCAGTATGGAAGTGGAGCCAGCAGTGGTGGCATG  683

seq1  ATCTGAGAACTAAATTTTGAGGGGCTGCAGCACAGGGCAAGGAGACCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAACTAAATTTTGAGGGGCTGCAGCACAGGGCAAGGAGACCAGG  733

seq1  CAAGTGTGCCTCCTAAAATTGCATGCTACAATTTACCTGTGAATTTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTGCCTCCTAAAATTGCATGCTACAATTTACCTGTGAATTTTAAT  783

seq1  ATTTCATTTTTTCTGTTTTTGATAGTTTCATTGTCTTTTCATTACCTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTTTTCTGTTTTTGATAGTTTCATTGTCTTTTCATTACCTATT  833

seq1  CTTTTGAGTAACATGTAGGTTGTATGTATTCCTTGTTACTATGAATGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGTAACATGTAGGTTGTATGTATTCCTTGTTACTATGAATGGAA  883

seq1  CACTGATGAACATAACTGAGGAAGTGTCCATGTTATAGAATGAAATATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATGAACATAACTGAGGAAGTGTCCATGTTATAGAATGAAATATCC  933

seq1  TTTGGATGCAAGCCCAATAGCTGGATCTTGAAGTAGATTGATTCCAATCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATGCAAGCCCAATAGCTGGATCTTGAAGTAGATTGATTCCAATCT  983

seq1  TCCTGAGGAAATGCTACATTGATTTCCACAGTACCTATACTTTGTACTCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGGAAATGCTACATTGATTTCCACAGTACCTATACTTTGTACTCC  1033

seq1  CCAAAACAATGAACGGGTAAATGTTCTCCTTACTTCTCATTCTCAACAGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACAATGAACGGGTAAATGTTCTCCTTACTTCTCATTCTCAACAGC  1083

seq1  ATAAAGGCTCACTCATTTTGTCGATGTTAGCCATTCTGATGCGTGAAAGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGCTCACTCATTTTGTCGATGTTAGCCATTCTGATGCGTGAAAGA  1133

seq1  TGAATTC  1157
      |||||||
seq2  TGAATTC  1140


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