BAC Information

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BAC

Clone NameB6Ng01-212O10
Chromosome10 (Build37)
Map Location 118,249,610 - 118,250,703
singlet/doubletsinglet
Overlap genenone
Upstream geneRap1b, Mdm1, Il22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213, LOC668216, Ifng, LOC100043478, LOC100042850
Downstream geneDyrk2, LOC668223, LOC100042861, LOC674417, Cand1, Grip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212O10.bB6Ng01-212O10.g
ACCGA030578GA030579
length1,1031,020
definitionB6Ng01-212O10.b B6Ng01-212O10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaaaatagacacaggggctggagcacacagctgggactccct
tcaggactttgcttcatcgggactagtggctaaaaagaaacagactggaa
gcctctggaaaaattcagaagctttggttccggggagatgaaaataggcc
tttggggtgtgccgagatgaagggtcagtgtgacatgccatgctcccaag
agaacgtgcatctcgagagcatatatgtatatgccatatgtacatatgtg
tatacacatatacgtatatgcatatacatttatatatgaatatatatata
catatatgtatatagctatacacacatatatatcaaacaaaagccccact
aagtatcccagtgctcttacaatgagcaagcttagctgtcaccctgaaat
cactgtctattcactcttctgagaatgaagggctctgcagtgtgtgattt
aaggctcccagatttaatttaccttttcatgttagctgatggtacttttc
aacagctaagaatgtctccagaatacaatattagtttaataattaataat
aataataatgataataataataataataataataataataggcaagcaga
ggcagcgtcacagttggactcagccacttccaaaaggtgtgaactcccta
gacccagcaccaagtgtggatgctaagagcttggattgcctgtcttgttc
ttcttccatactatagatatgagcagttgataacccagggtcttcaataa
atagcattgatttgtgggctgatgagatatttcagctaatgttctaactt
ccacacactaccctttgtcctccacacatgttgtcatgcctaagaacagc
aacacacacacacatgcacatatacattttatatatatatatatatttcc
aggattttttacttactcttccacagatctctaaagtcacagagtaggcc
tagtaagtgccatttcaattaaagtggtttagacatatcgtattaattga
ttgaattttctagggtaaacaccaatgtagaaactactgataagcatttc
tagcacattttagaagttgccatgttgattgccagttatgatggatacac
act
gaattctgcctttaaatggaaaagacattaagatctagaatacatgggct
gaacaagaacctgtccttgctatgtgccagcgactggtagaagcacttta
acctttacaagcacctccgagaaacatagttctactatgtccgtttgaca
ctggggaaagccaggcacagagggatcaaataacatactgcgaatcattc
agctaactaccggctgagtcgagatttgaacccatcatggccagttccag
aaaagagagaaaattaaaaaaaaaaaaaaagtcaagttaaatttcattta
aaatttccccgtgtgcaaatgggctcaggagctgactcctgtggacgttt
acctctcgcccaccagtgttccaattctcttctctctggtgaactgaggg
tgacacttgtcagttgtgaactttcttagcttcccagggaggtagtactt
taaagcatctcgtttgactctcctggggagacactctacccacccagtca
ctatagggcactaatgacaagccaaagattgcatccaagtttgtcttgat
ggaccagtgagtttattggggttgctcacaggagcataggtgaggagtta
gctatgggaacatagatgactaagcgtcaggtgcagcagcaaacagttga
ctccagcttaggtgacagctaataaaagctgtatccctgaagcctatgca
tgactggcaagcagaccttagtgctcagattgcctttcgtccaagcaatt
gctacttgcacatagaaaccttggggtaggggtttcatgggagtcttgta
aattttaggaacttcctgggttctttgcatttgtaatttgcaggattttt
tcaccttctgcccccattctggaataatgacttctttgagaactttattt
atatatgactaagtgcttcagccacaagttttggctccattcctcaaccg
agcttgttaatatcaattaaacagtttctatccctatagtgccaccaggc
tgtgtaactttcctcttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_118249610_118250703
seq2: B6Ng01-212O10.b_42_1144

seq1  GAATTCCTAAAAATAGACACAGGGGCTGGAGCACACAGCTGGGACTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAAATAGACACAGGGGCTGGAGCACACAGCTGGGACTCCCT  50

seq1  TCAGGACTTTGCTTCATCGGGACTAGTGGCTAAAAAGAAACAGACTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACTTTGCTTCATCGGGACTAGTGGCTAAAAAGAAACAGACTGGAA  100

seq1  GCCTCTGGAAAAATTCAGAAGCTTTGGTTCCGGGGAGATGAAAATAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGGAAAAATTCAGAAGCTTTGGTTCCGGGGAGATGAAAATAGGCC  150

seq1  TTTGGGGTGTGCCGAGATGAAGGGTCAGTGTGACATGCCATGCTCCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGTGTGCCGAGATGAAGGGTCAGTGTGACATGCCATGCTCCCAAG  200

seq1  AGAACGTGCATCTCGAGAGCATATATGTATATGCCATATGTACATATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGTGCATCTCGAGAGCATATATGTATATGCCATATGTACATATGTG  250

seq1  TATACACATATACGTATATGCATATACATTTATATATGAATATATATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACATATACGTATATGCATATACATTTATATATGAATATATATATA  300

seq1  CATATATGTATATAGCTATACACACATATATATCAAACAAAAGCCCCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGTATATAGCTATACACACATATATATCAAACAAAAGCCCCACT  350

seq1  AAGTATCCCAGTGCTCTTACAATGAGCAAGCTTAGCTGTCACCCTGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCCCAGTGCTCTTACAATGAGCAAGCTTAGCTGTCACCCTGAAAT  400

seq1  CACTGTCTATTCACTCTTCTGAGAATGAAGGGCTCTGCAGTGTGTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCTATTCACTCTTCTGAGAATGAAGGGCTCTGCAGTGTGTGATTT  450

seq1  AAGGCTCCCAGATTTAATTTACCTTTTCATGTTAGCTGATGGTACTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCCCAGATTTAATTTACCTTTTCATGTTAGCTGATGGTACTTTTC  500

seq1  AACAGCTAAGAATGTCTCCAGAATACAATATTAGTTTAATAATTAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTAAGAATGTCTCCAGAATACAATATTAGTTTAATAATTAATAAT  550

seq1  AATAATAATGATAATAATAATAATAATAATAATAATAATAGGCAAGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATGATAATAATAATAATAATAATAATAATAATAGGCAAGCAGA  600

seq1  GGCAGCGTCACAGTTGGACTCAGCCACTTCCAAAAGGTGTGAACTCCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCGTCACAGTTGGACTCAGCCACTTCCAAAAGGTGTGAACTCCCTA  650

seq1  GACCCAGCACCAAGTGTGGATGCTAAGAGCTTGGATTGCCTGTCTTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGCACCAAGTGTGGATGCTAAGAGCTTGGATTGCCTGTCTTGTTC  700

seq1  TTCTTCCATACTATAGATATGAGCAGTTGATAACCCAGGGTCTTCAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCATACTATAGATATGAGCAGTTGATAACCCAGGGTCTTCAATAA  750

seq1  ATAGCATTGATTTGTGGGCTGATGAGATATTTCAGCTAATGTTCTAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTGATTTGTGGGCTGATGAGATATTTCAGCTAATGTTCTAACTT  800

seq1  CCACACACTACCCTTTGTCCTCCACACATG-TGTCATGCCTAAGAACAGC  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCACACACTACCCTTTGTCCTCCACACATGTTGTCATGCCTAAGAACAGC  850

seq1  AACACACACACACATGCACATATACATTTTATATATATATATATATTTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACACACATGCACATATACATTTTATATATATATATATATTTCC  900

seq1  AGGA-TTTTTACTTACCCTCCCACAGATCTCTAAAGTCACAGAGTAGGCC  948
      |||| ||||||||||| || ||||||||||||||||||||||||||||||
seq2  AGGATTTTTTACTTACTCTTCCACAGATCTCTAAAGTCACAGAGTAGGCC  950

seq1  TAGTAAGTGCCATTTCAATTAAAGT-GTTTAGACATATGG--ATAATTGA  995
      ||||||||||||||||||||||||| |||||||||||| |   |||||||
seq2  TAGTAAGTGCCATTTCAATTAAAGTGGTTTAGACATATCGTATTAATTGA  1000

seq1  TAGAA-TTTCTAGGGTAAACA-CAATGTAGAAACTACTGATAAGTA-TTC  1042
      | ||| ||||||||||||||| |||||||||||||||||||||| | |||
seq2  TTGAATTTTCTAGGGTAAACACCAATGTAGAAACTACTGATAAGCATTTC  1050

seq1  TAGCACATTTTAGAAG-TGCCATG-TGATGGCCAGGTATGATGGTATACA  1090
      |||||||||||||||| ||||||| |||| ||||| |||||||| |||||
seq2  TAGCACATTTTAGAAGTTGCCATGTTGATTGCCAGTTATGATGG-ATACA  1099

seq1  CACT  1094
      ||||
seq2  CACT  1103