BAC Information

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BAC

Clone NameB6Ng01-212P18
Chromosome10 (Build37)
Map Location 120,716,805 - 120,771,976
singlet/doubletdoublet
Overlap gene4930505D03Rik
Upstream geneHmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1, LOC100042911
Downstream geneLOC100043498, Gns, Rassf3, LOC100043500, Tbk1, Xpot, D930020B18Rik, BC048403, Srgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212P18.bB6Ng01-212P18.g
ACCGA030640GA030641
length1,1101,097
definitionB6Ng01-212P18.b B6Ng01-212P18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,716,805 - 120,717,907)(120,770,875 - 120,771,976)
sequence
gaattcaggcatctcacatcctcttgccgtctgagaggtgtgttagctcc
tgcatcgtcagcacccacacatgcccctcccaggtctggcttgtttaaag
tgttttgataactttcgtgggcactgatatcagctttctgaatctaatta
agtttcgtggatgacctggtagttgactgcgagctttctccaaggggacc
actgttcccaatgcctgtggaggagctctaagctagaactgatagctgct
atttttgaagggaaaagaaaaaacaatggtaggttaatgaagcataggct
atcaaaaaaaaaaaaatcctacaaataaaaacaagggagccaggtgtggt
cccgcatgctttaaccccagcactcagaaggcagaggcaggcatgtctct
gtgtttcagaccagtgtagtctacagagctagttacagttataggacagc
caaggctaaacagagaatccttatctccaaaagggggagggtgggagggc
acttgggcttacaccagacctggaaactctgcatcagcctgaagaaaagg
ataggcttagttctcttactcttaaaacttaattgccccacactcaccca
ctcagccacccagcccccctcactagcaaatgtgcactggtaatgtgatc
atttcttgatagaagccaatcaaatatcctgaggaaaggactgggaaaaa
aaaacgactcagcagttgagagcacttgctgctcctagaagggccgaggc
tcagtccccagcacccacacggcagctcacaacagcctgtaattccagtt
ccaggggctccaacaccacgacctctgtggatcccaggcatgagaacagt
gaacacacatgcaagtgggcacacatctgtgcttaatgaagtaaacgtaa
ataaatcttcaaaaactatatatatattgatggtctaggaaactattttt
aagtgggtttttttccatctctgccagacctctggactgaagcgcctcct
ttggtaggaagggagagctctgaattggagtgtcaagctgggttcaactg
gcaatttctgttgatgctactgtgaacagtttcacttcagtttgatgcat
ccgttccctc
gaattcagtgtgatttctctttacccacaagccttggttgaacacagtga
ggcctgagggttgacattctcagctggttcatgacacagccaggactcct
ccggctgtgctgtcagatgctgtcattaccaactacagccagcaggggga
gcactcttaggcatgcataagaaaggcattaaagttcctattagtagtgt
gttgtgccatcccagaaggtaagaaagcctactaaacaggaactgatgtg
atctgggacagagtatatgaaaggattgagggagtccttttaaaatgcac
tttctggggcctggagagatggctcagcggttaagagcactgacggctct
tccagaggtcctgagttcaattcctagcaagacatagtggctcacaacca
tctgtaatgggatctgacgccctcttctggtgtgtctgaagacagctgcg
gtgtactcacatacataaaataagtaaaaatcactttttgtacatattat
tatttttacatttagttacaataaaatactttttgaagtgggatgtttca
atcattttgaatgctaaaaaggagcactgccatttaaaatatcttttctg
tatgaaaatatcatttattcacttgacagatatttacatgcctttacaac
ttaccagacatgattataggcgatgagcaacatgtccaagattaataccg
catgattcaaagcgtcttttaccgtaagtaaatatttaagatgatttgag
tgttcttccccaaagcattggctgctgtctgtacgtcagcagactgcatt
cttcttgtgttggatactgaatctacagcagcacgcacaatcataatgta
acatgcggcaatgcttggccccccccacttcccagcattcaggtttgatt
gactggcatgagctgacacattgatttgtaagctttccagagctgttctt
aggaacagaaaagtttggaaacctgtaaactattcctcagcattggcaga
tccctgagagagacaaagcttattctccttcattccctttcccgcttggg
agatagtcttcactgtaattccaggctgcttgacttgcaatgtagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_120716805_120717907
seq2: B6Ng01-212P18.b_48_1157

seq1  GAATTCAGGCATCTCACATCCTCTTGCCGTCTGAGAGGTGTGTTAGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCATCTCACATCCTCTTGCCGTCTGAGAGGTGTGTTAGCTCC  50

seq1  TGCATCGTCAGCACCCACACATGCCCCTCCCAGGTCTGGCTTGTTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCGTCAGCACCCACACATGCCCCTCCCAGGTCTGGCTTGTTTAAAG  100

seq1  TGTTTTGATAACTTTCGTGGGCACTGATATCAGCTTTCTGAATCTAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGATAACTTTCGTGGGCACTGATATCAGCTTTCTGAATCTAATTA  150

seq1  AGTTTCGTGGATGACCTGGTAGTTGACTGCGAGCTTTCTCCAAGGGGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCGTGGATGACCTGGTAGTTGACTGCGAGCTTTCTCCAAGGGGACC  200

seq1  ACTGTTCCCAATGCCTGTGGAGGAGCTCTAAGCTAGAACTGATAGCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCCCAATGCCTGTGGAGGAGCTCTAAGCTAGAACTGATAGCTGCT  250

seq1  ATTTTTGAAGGGAAAAGAAAAAACAATGGTAGGTTAATGAAGCATAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAAGGGAAAAGAAAAAACAATGGTAGGTTAATGAAGCATAGGCT  300

seq1  ATCAAAAAAAAAAAAATCCTACAAATAAAAACAAGGGAGCCAGGTGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAAAAAAAAAATCCTACAAATAAAAACAAGGGAGCCAGGTGTGGT  350

seq1  CCCGCATGCTTTAACCCCAGCACTCAGAAGGCAGAGGCAGGCATGTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCATGCTTTAACCCCAGCACTCAGAAGGCAGAGGCAGGCATGTCTCT  400

seq1  GTGTTTCAGACCAGTGTAGTCTACAGAGCTAGTTACAGTTATAGGACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCAGACCAGTGTAGTCTACAGAGCTAGTTACAGTTATAGGACAGC  450

seq1  CAAGGCTAAACAGAGAATCCTTATCTCCAAAAGGGGGAGGGTGGGAGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTAAACAGAGAATCCTTATCTCCAAAAGGGGGAGGGTGGGAGGGC  500

seq1  ACTTGGGCTTACACCAGACCTGGAAACTCTGCATCAGCCTGAAGAAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGCTTACACCAGACCTGGAAACTCTGCATCAGCCTGAAGAAAAGG  550

seq1  ATAGGCTTAGTTCTCTTACTCTTAAAACTTAATTGCCCCACACTCACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTTAGTTCTCTTACTCTTAAAACTTAATTGCCCCACACTCACCCA  600

seq1  CTCAGCCACCCAGCCCCCCTCACTAGCAAATGTGCACTGGTAATGTGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCACCCAGCCCCCCTCACTAGCAAATGTGCACTGGTAATGTGATC  650

seq1  ATTTCTTGATAGAAGCCAATCAAATATCCTGAGGAAAGGACTGGGAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGATAGAAGCCAATCAAATATCCTGAGGAAAGGACTGGGAAAAA  700

seq1  AAAACGACTCAGCAGTTGAGAGCACTTGCTGCTCCTAGAAGGGCCGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGACTCAGCAGTTGAGAGCACTTGCTGCTCCTAGAAGGGCCGAGGC  750

seq1  TCAGTCCCCAGCACCCACACGGCAGCTCACAACAGCCTGTAATTCCAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCCCAGCACCCACACGGCAGCTCACAACAGCCTGTAATTCCAGTT  800

seq1  CCAGGGGCTCCAACACCACGACCTCTGTGGATCCCAGGCATGAGAACAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGCTCCAACACCACGACCTCTGTGGATCCCAGGCATGAGAACAGT  850

seq1  GAACACACATGCAAGTGGGCACAACATCTGTGCTT-ATGAAGTAAACGTA  899
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  GAACACACATGCAAGTGGGCAC-ACATCTGTGCTTAATGAAGTAAACGTA  899

seq1  AATAAATCTTCAAAAACTATATATATATTGATGGTCTAGGAAACTATTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCTTCAAAAACTATATATATATTGATGGTCTAGGAAACTATTTT  949

seq1  TAAGTGG--TTTTTTCCATCTCTGCCAGACCTCTGGGACTGAGGCG-CTC  996
      |||||||  ||||||||||||||||||||||||| ||||||| ||| |||
seq2  TAAGTGGGTTTTTTTCCATCTCTGCCAGACCTCT-GGACTGAAGCGCCTC  998

seq1  CTTGGGTAGGAAGGGGAGAGCTCTGAA-TGGAGTGTC-AGCT-GGTTCAA  1043
      ||| |||||||| |||||||||||||| ||||||||| |||| |||||||
seq2  CTTTGGTAGGAA-GGGAGAGCTCTGAATTGGAGTGTCAAGCTGGGTTCAA  1047

seq1  CTGGCAATTTCTG-TGATGCTACTGTG-ACAG-TTCACTTCAGTTTTGAT  1090
      ||||||||||||| ||||||||||||| |||| |||||||||| ||||||
seq2  CTGGCAATTTCTGTTGATGCTACTGTGAACAGTTTCACTTCAG-TTTGAT  1096

seq1  GCATCCG-TCCCTC  1103
      ||||||| ||||||
seq2  GCATCCGTTCCCTC  1110

seq1: chr10_120770875_120771976
seq2: B6Ng01-212P18.g_64_1160 (reverse)

seq1  GGCTACACTGCAAGTTCCAGGCCAGCCTGGGATTTACAGTGAAGACTATC  50
      ||||||| |||||||  || | |||||| ||| |||||||||||||||||
seq2  GGCTACATTGCAAGT--CAAG-CAGCCT-GGAATTACAGTGAAGACTATC  46

seq1  TCCAAAGCGGG-AAGGGAATGAAGGAGAATAAGCTTTGTCCTTCTCTTCA  99
      ||| ||||||| ||||||||||||||||||||||||||||  |||| |||
seq2  TCCCAAGCGGGAAAGGGAATGAAGGAGAATAAGCTTTGTC--TCTC-TCA  93

seq1  GGGATCTGCCAATGCTGAGGAATAGTTTACAGGTTTCCAAACTTTTCTGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGCCAATGCTGAGGAATAGTTTACAGGTTTCCAAACTTTTCTGT  143

seq1  TCCTAAGAACAGCTCTGG-AAGCTTACAAATCAATGTGTCAGCTCATGCC  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCCTAAGAACAGCTCTGGAAAGCTTACAAATCAATGTGTCAGCTCATGCC  193

seq1  AGTCAATCAAACCTGAATGCTGGGAAGTGGGGGGGGCCAAGCATTGCCGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATCAAACCTGAATGCTGGGAAGTGGGGGGGGCCAAGCATTGCCGC  243

seq1  ATGTTACATTATGATTGTGCGTGCTGCTGTAGATTCAGTATCCAACACAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACATTATGATTGTGCGTGCTGCTGTAGATTCAGTATCCAACACAA  293

seq1  GAAGAATGCAGTCTGCTGACGTACAGACAGCAGCCAATGCTTTGGGGAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGCAGTCTGCTGACGTACAGACAGCAGCCAATGCTTTGGGGAAG  343

seq1  AACACTCAAATCATCTTAAATATTTACTTACGGTAAAAGACGCTTTGAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCAAATCATCTTAAATATTTACTTACGGTAAAAGACGCTTTGAAT  393

seq1  CATGCGGTATTAATCTTGGACATGTTGCTCATCGCCTATAATCATGTCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGGTATTAATCTTGGACATGTTGCTCATCGCCTATAATCATGTCTG  443

seq1  GTAAGTTGTAAAGGCATGTAAATATCTGTCAAGTGAATAAATGATATTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTGTAAAGGCATGTAAATATCTGTCAAGTGAATAAATGATATTTT  493

seq1  CATACAGAAAAGATATTTTAAATGGCAGTGCTCCTTTTTAGCATTCAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGAAAAGATATTTTAAATGGCAGTGCTCCTTTTTAGCATTCAAAA  543

seq1  TGATTGAAACATCCCACTTCAAAAAGTATTTTATTGTAACTAAATGTAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAAACATCCCACTTCAAAAAGTATTTTATTGTAACTAAATGTAAA  593

seq1  AATAATAATATGTACAAAAAGTGATTTTTACTTATTTTATGTATGTGAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATATGTACAAAAAGTGATTTTTACTTATTTTATGTATGTGAGT  643

seq1  ACACCGCAGCTGTCTTCAGACACACCAGAAGAGGGCGTCAGATCCCATTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGCAGCTGTCTTCAGACACACCAGAAGAGGGCGTCAGATCCCATTA  693

seq1  CAGATGGTTGTGAGCCACTATGTCTTGCTAGGAATTGAACTCAGGACCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTTGTGAGCCACTATGTCTTGCTAGGAATTGAACTCAGGACCTC  743

seq1  TGGAAGAGCCGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGGCCCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGCCGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGGCCCCA  793

seq1  GAAAGTGCATTTTAAAAGGACTCCCTCAATCCTTTCATATACTCTGTCCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGCATTTTAAAAGGACTCCCTCAATCCTTTCATATACTCTGTCCC  843

seq1  AGATCACATCAGTTCCTGTTTAGTAGGCTTTCTTACCTTCTGGGATGGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACATCAGTTCCTGTTTAGTAGGCTTTCTTACCTTCTGGGATGGCA  893

seq1  CAACACACTACTAATAGGAACTTTAATGCCTTTCTTATGCATGCCTAAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACACTACTAATAGGAACTTTAATGCCTTTCTTATGCATGCCTAAGA  943

seq1  GTGCTCCCCCTGCTGGCTGTAGTTGGTAATGACAGCATCTGACAGCACAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCCCCTGCTGGCTGTAGTTGGTAATGACAGCATCTGACAGCACAG  993

seq1  CCGGAGGAGTCCTGGCTGTGTCATGAACCAGCTGAGAATGTCAACCCTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGGAGTCCTGGCTGTGTCATGAACCAGCTGAGAATGTCAACCCTCA  1043

seq1  GGCCTCACTGTGTTCAACCAAGGCTTGTGGGTAAAGAGAAATCACACTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCACTGTGTTCAACCAAGGCTTGTGGGTAAAGAGAAATCACACTGA  1093

seq1  ATTC  1102
      ||||
seq2  ATTC  1097