BAC Information

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BAC

Clone NameB6Ng01-213D12
Chromosome10 (Build37)
Map Location 49,450,372 - 49,451,109
singlet/doubletsinglet
Overlap geneGrik2
Upstream geneLOC546562, LOC100041689
Downstream geneLOC629652, Ascc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213D12.bB6Ng01-213D12.g
ACCGA030814GA030815
length1,151738
definitionB6Ng01-213D12.b B6Ng01-213D12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatcctcaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcagaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggt
atatgtccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagctgccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacaccctgtgaaggatttacagagacaaagtttggagctgagatga
aaggatggtccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacgctagcaagattttttgtgag
actatgctggggcctagcaacacagaaagtggatgctcacagtcagctaa
tggatggatcacagggcctcccaatggaggagctagagaaagtacccagg
agctaagggatcttgcaccctatagcggaacaacatattgaactaccagt
atccagagctcttgacttctagctgcatatgtatcaaaagatgggcctta
gtcgccatccttggaaagagagcccatgaacacgcaactttaatttgcct
cagttacagggaacgccagggccaacggggagtgggtgtgggcaaggtac
t

gaattctaatattcgccgcagtgtcccacccttctacaataactagttaa
tctcttaggttgaaatcagagcatttaactagaaagcacaaaacagcctc
agtcctgtccctgctgcgaaggtttagcatgtttgaccacatccatgtga
caactagaagaggaacaatggaggttttcactggtgtctcatgaatttat
attgaatttctcagaatgctttaaaatgctccaactcataaatcattgtt
cattctactattattagaagctataattgtaaatgtagagcatggcattc
tgggacttataaattgtgaatactttctttgtctacagagaaagtgaaag
taataagcctgttttctaccaaatcaggtgctttaagtatgcaaccattt
gtgctgccatgggagcaggggtagggtgtggggagtctaagggcaaggaa
aggcaaaggaactaggagtaggagagtcaacagaaagacagatcaccagg
tcttagtctatgggaagataatgaaatcctcttctgcataagtccaccct
ctcctttgcgtactctagatcatgtaatgatttttatgtttatcatttct
tgattggctctttttatatgtcatgttttgataatgaattaaaatcctca
gaacttgttagaatttaagtaaatgttttataggaaatttaacatgtatg
catgtgtatatggtttatatataaggtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_49450372_49451109
seq2: B6Ng01-213D12.g_67_804

seq1  GAATTCTAATATTCGCCGCAGTGTCCCACCCTTCTACAATAACTAGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATATTCGCCGCAGTGTCCCACCCTTCTACAATAACTAGTTAA  50

seq1  TCTCTTAGGTTGAAATCAGAGCATTTAACTAGAAAGCACAAAACAGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGGTTGAAATCAGAGCATTTAACTAGAAAGCACAAAACAGCCTC  100

seq1  AGTCCTGTCCCTGCTGCGAAGGTTTAGCATGTTTGACCACATCCATGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGTCCCTGCTGCGAAGGTTTAGCATGTTTGACCACATCCATGTGA  150

seq1  CAACTAGAAGAGGAACAATGGAGGTTTTCACTGGTGTCTCATGAATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGAAGAGGAACAATGGAGGTTTTCACTGGTGTCTCATGAATTTAT  200

seq1  ATTGAATTTCTCAGAATGCTTTAAAATGCTCCAACTCATAAATCATTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTTCTCAGAATGCTTTAAAATGCTCCAACTCATAAATCATTGTT  250

seq1  CATTCTACTATTATTAGAAGCTATAATTGTAAATGTAGAGCATGGCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTACTATTATTAGAAGCTATAATTGTAAATGTAGAGCATGGCATTC  300

seq1  TGGGACTTATAAATTGTGAATACTTTCTTTGTCTACAGAGAAAGTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTATAAATTGTGAATACTTTCTTTGTCTACAGAGAAAGTGAAAG  350

seq1  TAATAAGCCTGTTTTCTACCAAATCAGGTGCTTTAAGTATGCAACCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGCCTGTTTTCTACCAAATCAGGTGCTTTAAGTATGCAACCATTT  400

seq1  GTGCTGCCATGGGAGCAGGGGTAGGGTGTGGGGAGTCTAAGGGCAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCCATGGGAGCAGGGGTAGGGTGTGGGGAGTCTAAGGGCAAGGAA  450

seq1  AGGCAAAGGAACTAGGAGTAGGAGAGTCAACAGAAAGACAGATCACCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGGAACTAGGAGTAGGAGAGTCAACAGAAAGACAGATCACCAGG  500

seq1  TCTTAGTCTATGGGAAGATAATGAAATCCTCTTCTGCATAAGTCCACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTCTATGGGAAGATAATGAAATCCTCTTCTGCATAAGTCCACCCT  550

seq1  CTCCTTTGCGTACTCTAGATCATGTAATGATTTTTATGTTTATCATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGCGTACTCTAGATCATGTAATGATTTTTATGTTTATCATTTCT  600

seq1  TGATTGGCTCTTTTTATATGTCATGTTTTGATAATGAATTAAAATCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGCTCTTTTTATATGTCATGTTTTGATAATGAATTAAAATCCTCA  650

seq1  GAACTTGTTAGAATTTAAGTAAATGTTTTATAGGAAATTTAACATGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGTTAGAATTTAAGTAAATGTTTTATAGGAAATTTAACATGTATG  700

seq1  CATGTGTATATGGTTTATATATAAGGTGTGTGTGTGTG  738
      ||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTATATGGTTTATATATAAGGTGTGTGTGTGTG  738


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