BAC Information

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BAC

Clone NameB6Ng01-213G09
Chromosome10 (Build37)
Map Location 111,135,193 - 111,314,811
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10, Nap1l1, EG382421, Phlda1
Downstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2, LOC100042639
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213G09.bB6Ng01-213G09.g
ACCGA030940GA030941
length1,2131,142
definitionB6Ng01-213G09.b B6Ng01-213G09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,135,193 - 111,136,399)(111,313,667 - 111,314,811)
sequence
gaattctatatcttgatctgaaggcagccaggaggatggtctcatttgca
ttgagcagagcctgagcactaggagccctcaaagtctgcctacacagtga
cacacttcctcctacaaggccacgtctatttcaataaggctacacctaat
agtaccactttccatgggccaagcatatttaaatcaccacagatagcaag
ttttttgcaaaaaccatcccagaaccatcctgggtttgtatagctcattg
catgaacttagggtaagaaacagggacaaaaaacaaaactcagggcaggt
ggcacatagggggaaacgacaacagctaactgtcggaatacaaaatgttc
tccatgggctcatgttttgaacacttggttctcagtaggtgatgctcagg
tagcttgtggaggttgctggatgggcgcctgactggaggatgtaggttac
tggaagcgctccttcagggtctgttctgtcatcacccaacccttgcttga
tgtgaagaactttctctgctacttacttctgcttcaaatgtattttccca
gtccatcgggacccaggaccacagacgactctttgaaagtgtgagacaga
ataaatgcttcatcctctagtttgcatctggtcatggttgcacagaagcc
tgagtatatagcctactgcccacgtcgcaagtttcacagttttcctactc
tccctctcagctgcatcaactttcctcctggtgatgtggatatgaggacc
aggatcaaggaataccagaagcaccgtaaagatgctggaaatatgcctga
agctggggcatatttcctctttgaggaaggtgcgcgggcaggtatatctg
gacacagctacagctcagatttaccggaaaagcacctgtttgcctatctg
ctttgtctaggtagtggttacatgggatctcaggcatgcacagaggattt
agggatggcatagcctttgactcataagtgctatgtttgccttgcttaat
agatagctgtatagttgtctggctcttgactctagagtgtattatgatgt
tctggccaggctggtgggtggttagcatgctgttagcttcttcttagact
tcttgcaatggttagccaggagggagatcttgtttacctgcctaggatgg
gtatgtgtgtaaatttccattgaactggaaatggtctcatataaccagtc
agggggatgggtt

gaattcagacatcagagatgatatttgcagagtgtataactaattagaag
tgtacccgaaatacatattttgaaattcttcaaaccaataagacaaaggg
gctggggtgatcactcagcagttaagaggagtgtctgctcttggatttgg
ttctgggcgtggtgactcacaacttcctgtaactccagttccagggaatc
taacttcatcttctggcctccacaggcattgcatgcacgtggtggaactt
ccaggcatgaggtcaaaatactcacgcatgtaaaataaaatgatttttaa
aaaggtaagtaaggcaaaaatcaggcaatatgctaaaaagatgagcaaga
gacttagacatgtcacaaaattagatatacaaatgcctctggaaaagcaa
agttagggaagtaaagggaaccagacttcaagccaccaggggtcatgagc
taaagattagcccaatgggaggaagatgccagaagcaccaccagatccag
agagaggaaagcagaaggtaaggtgggaggcagacgatggtgctatactt
aaattctattccttggcacacgtctgcggtgaccagaacggagacagcat
ttttgagaaagggaaacaaaccagttgaaaggaaaactgaaaatgaggtg
aggtagcattgttggatttatagcccctacgatgtgccaggcaaactctt
ccaccagtgccatgtgtaccttcctgtgctttccccagcacgaagtccac
caaaggcttccgaggcaggattctgggagaggtggaatacaaggggagac
tgagcacaggggagacggaggggaacacgtcacagggcgtgggagatgaa
cgttctgaaacgcacgcattgggagagctgatgggttgaatatggactct
tcatttccacccggaatcactgtaagaagcaatgagatccacgaacaatg
agacgtcacagaggaggatcccgcaggcagaaaccctgaaggaccgatgg
gaggaggagcttcagatcgattgcttggagtgatggctgtatggaccaca
gtacattaaatcttattgctgccaatagatttaattgtcttcatcacgac
gagatgatagtctctcgttagcctcagctctctttaatcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_111135193_111136399
seq2: B6Ng01-213G09.b_43_1255

seq1  GAATTCTATATCTTGATCTGAAGGCAGCCAGGAGGATGGTCTCATTTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATCTTGATCTGAAGGCAGCCAGGAGGATGGTCTCATTTGCA  50

seq1  TTGAGCAGAGCCTGAGCACTAGGAGCCCTCAAAGTCTGCCTACACAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCAGAGCCTGAGCACTAGGAGCCCTCAAAGTCTGCCTACACAGTGA  100

seq1  CACACTTCCTCCTACAAGGCCACGTCTATTTCAATAAGGCTACACCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCCTCCTACAAGGCCACGTCTATTTCAATAAGGCTACACCTAAT  150

seq1  AGTACCACTTTCCATGGGCCAAGCATATTTAAATCACCACAGATAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCACTTTCCATGGGCCAAGCATATTTAAATCACCACAGATAGCAAG  200

seq1  TTTTTTGCAAAAACCATCCCAGAACCATCCTGGGTTTGTATAGCTCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCAAAAACCATCCCAGAACCATCCTGGGTTTGTATAGCTCATTG  250

seq1  CATGAACTTAGGGTAAGAAACAGGGACAAAAAACAAAACTCAGGGCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACTTAGGGTAAGAAACAGGGACAAAAAACAAAACTCAGGGCAGGT  300

seq1  GGCACATAGGGGGAAACGACAACAGCTAACTGTCGGAATACAAAATGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATAGGGGGAAACGACAACAGCTAACTGTCGGAATACAAAATGTTC  350

seq1  TCCATGGGCTCATGTTTTGAACACTTGGTTCTCAGTAGGTGATGCTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGGCTCATGTTTTGAACACTTGGTTCTCAGTAGGTGATGCTCAGG  400

seq1  TAGCTTGTGGAGGTTGCTGGATGGGCGCCTGACTGGAGGATGTAGGTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGTGGAGGTTGCTGGATGGGCGCCTGACTGGAGGATGTAGGTTAC  450

seq1  TGGAAGCGCTCCTTCAGGGTCTGTTCTGTCATCACCCAACCCTTGCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCGCTCCTTCAGGGTCTGTTCTGTCATCACCCAACCCTTGCTTGA  500

seq1  TGTGAAGAACTTTCTCTGCTACTTACTTCTGCTTCAAATGTATTTTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGAACTTTCTCTGCTACTTACTTCTGCTTCAAATGTATTTTCCCA  550

seq1  GTCCATCGGGACCCAGGACCACAGACGACTCTTTGAAAGTGTGAGACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCGGGACCCAGGACCACAGACGACTCTTTGAAAGTGTGAGACAGA  600

seq1  ATAAATGCTTCATCCTCTAGTTTGCATCTGGTCATGGTTGCACAGAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCTTCATCCTCTAGTTTGCATCTGGTCATGGTTGCACAGAAGCC  650

seq1  TGAGTATATAGCCTACTGCCCACGTCGCAAGTTTCACAGTTTTCCTACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATATAGCCTACTGCCCACGTCGCAAGTTTCACAGTTTTCCTACTC  700

seq1  TCCCTCTCAGCTGCATCAACTTTCCTCCTGGTGATGTGGATATGAGGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCAGCTGCATCAACTTTCCTCCTGGTGATGTGGATATGAGGACC  750

seq1  AGGATCAAGGAATACCAGAAGCACCGTAAAGATGCTGGAAATATGCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCAAGGAATACCAGAAGCACCGTAAAGATGCTGGAAATATGCCTGA  800

seq1  AGCTGGGGCATATTTCCTCTTTGAGGAAGGTGCGCGGGCAGGTATATCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGGCATATTTCCTCTTTGAGGAAGGTGCGCGGGCAGGTATATCTG  850

seq1  GACACAGCTACAGCTCAGATTTACCGGAAAAGCACCTGTTTGCCTATCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGCTACAGCTCAGATTTACCGGAAAAGCACCTGTTTGCCTATCTG  900

seq1  CTTTGTCTAGGTAGTGGTTACATGGGATCTCAGGCATGCACAGAGGATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTAGGTAGTGGTTACATGGGATCTCAGGCATGCACAGAGGATTT  950

seq1  AGGGATGGCATAGCCTTTGACTCATAAGTGCTATGTTTGCCTTGCTTAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGGCATAGCCTTTGACTCATAAGTGCTATGTTTGCCTTGCTTAAT  1000

seq1  AGATAGCTGTATAGTTGTCTGGCTCTTGACTCTAGAGTGTA-TATGATGT  1049
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGATAGCTGTATAGTTGTCTGGCTCTTGACTCTAGAGTGTATTATGATGT  1050

seq1  TCTGGCCAGGCTGGTGGGTGG-TAGCATGCTG-TAGCTCTTCCTTAGGAC  1097
      ||||||||||||||||||||| |||||||||| |||||  | |||| |||
seq2  TCTGGCCAGGCTGGTGGGTGGTTAGCATGCTGTTAGCTTCTTCTTA-GAC  1099

seq1  TTC-TGCAATGG-TAGCCAGGAGGAGAATCT--GTTACCTTGCTAGGATG  1143
      ||| |||||||| |||||||||||   ||||   ||||||  ||||||||
seq2  TTCTTGCAATGGTTAGCCAGGAGGGAGATCTTGTTTACCTGCCTAGGATG  1149

seq1  GGTATGTG-GT-AATTTCCATGAAACTGG-AATGGGTTCATATAAACCAG  1190
      |||||||| || |||||||||  |||||| |||||  |||||| ||||||
seq2  GGTATGTGTGTAAATTTCCATTGAACTGGAAATGGTCTCATAT-AACCAG  1198

seq1  TCAAGGGGGGATGGGTT  1207
      |||  ||||||||||||
seq2  TCA--GGGGGATGGGTT  1213


seq1: chr10_111313667_111314811
seq2: B6Ng01-213G09.g_66_1207 (reverse)

seq1  AATGATTAAAGAGAGCTGA-GCTAACCGAGAGATTATCATCTCGTTGGTG  49
      ||||||||||||||||||| ||||| ||||||| |||||||||| | |||
seq2  AATGATTAAAGAGAGCTGAGGCTAA-CGAGAGACTATCATCTCG-TCGTG  48

seq1  ATGAAGACATTTAAATCTATTGGCAGCAAT-AGATTTAATGTACTGTGGT  98
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  ATGAAGACAATTAAATCTATTGGCAGCAATAAGATTTAATGTACTGTGGT  98

seq1  TCATTACAGCCATCACTCCAAGCAATCGATTCCTGAAGCTTCCTCCTCCC  148
       || ||||||||||||||||||||||||||  ||||||| ||||||||||
seq2  CCA-TACAGCCATCACTCCAAGCAATCGAT--CTGAAGC-TCCTCCTCCC  144

seq1  ATCGGTCCTTCAGGGTTTCTTGCCTGCGGGATCCT-CTCTGTGACGTCTC  197
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  ATCGGTCCTTCAGGGTTTC-TGCCTGCGGGATCCTCCTCTGTGACGTCTC  193

seq1  ATTGTTCGTGGATCTCATTGCTTCTTACAGTGATTCCGGGTGGAAATGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCGTGGATCTCATTGCTTCTTACAGTGATTCCGGGTGGAAATGAA  243

seq1  GAGTCCATATTCAACCCATCAGCTCT-CCAATGCGTGCGTTTCAGAACGT  296
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGTCCATATTCAACCCATCAGCTCTCCCAATGCGTGCGTTTCAGAACGT  293

seq1  TCATCTCCCACGCCCTGTGACGTGTTCCCCTCCGTCTCCCCTGTGCTCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCCCACGCCCTGTGACGTGTTCCCCTCCGTCTCCCCTGTGCTCAG  343

seq1  TCTCCCCTTGTATTCCACCTCTCCCAGAATCCTGCCTCGGAAGCCTTTGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTTGTATTCCACCTCTCCCAGAATCCTGCCTCGGAAGCCTTTGG  393

seq1  TGGACTTCGTGCTGGGGAAAGCACAGGAAGGTACACATGGCACTGGTGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTCGTGCTGGGGAAAGCACAGGAAGGTACACATGGCACTGGTGGA  443

seq1  AGAGTTTGCCTGGCACATCGTAGGGGCTATAAATCCAACAATGCTACCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGCCTGGCACATCGTAGGGGCTATAAATCCAACAATGCTACCTC  493

seq1  ACCTCATTTTCAGTTTTCCTTTCAACTGGTTTGTTTCCCTTTCTCAAAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATTTTCAGTTTTCCTTTCAACTGGTTTGTTTCCCTTTCTCAAAAA  543

seq1  TGCTGTCTCCGTTCTGGTCACCGCAGACGTGTGCCAAGGAATAGAATTTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTCCGTTCTGGTCACCGCAGACGTGTGCCAAGGAATAGAATTTA  593

seq1  AGTATAGCACCATCGTCTGCCTCCCACCTTACCTTCTGCTTTCCTCTCTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGCACCATCGTCTGCCTCCCACCTTACCTTCTGCTTTCCTCTCTC  643

seq1  TGGATCTGGTGGTGCTTCTGGCATCTTCCTCCCATTGGGCTAATCTTTAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTGGTGGTGCTTCTGGCATCTTCCTCCCATTGGGCTAATCTTTAG  693

seq1  CTCATGACCCCTGGTGGCTTGAAGTCTGGTTCCCTTTACTTCCCTAACTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGACCCCTGGTGGCTTGAAGTCTGGTTCCCTTTACTTCCCTAACTT  743

seq1  TGCTTTTCCAGAGGCATTTGTATATCTAATTTTGTGACATGTCTAAGTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCCAGAGGCATTTGTATATCTAATTTTGTGACATGTCTAAGTCT  793

seq1  CTTGCTCATCTTTTTAGCATATTGCCTGATTTTTGCCTTACTTACCTTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCATCTTTTTAGCATATTGCCTGATTTTTGCCTTACTTACCTTTT  843

seq1  TAAAAATCATTTTATTTTACATGCGTGAGTATTTTGACCTCATGCCTGGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCATTTTATTTTACATGCGTGAGTATTTTGACCTCATGCCTGGA  893

seq1  AGTTCCACCACGTGCATGCAATGCCTGTGGAGGCCAGAAGATGAAGTTAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACCACGTGCATGCAATGCCTGTGGAGGCCAGAAGATGAAGTTAG  943

seq1  ATTCCCTGGAACTGGAGTTACAGGAAGTTGTGAGTCACCACGCCCAGAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTGGAACTGGAGTTACAGGAAGTTGTGAGTCACCACGCCCAGAAC  993

seq1  CAAATCCAAGAGCAGACACTCCTCTTAACTGCTGAGTGATCACCCCAGCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCAAGAGCAGACACTCCTCTTAACTGCTGAGTGATCACCCCAGCC  1043

seq1  CCTTTGTCTTATTGGTTTGAAGAATTTCAAAATATGTATTTCGGGTACAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTCTTATTGGTTTGAAGAATTTCAAAATATGTATTTCGGGTACAC  1093

seq1  TTCTAATTAGTTATACACTCTGCAAATATCATCTCTGATGTCTGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTAGTTATACACTCTGCAAATATCATCTCTGATGTCTGAATTC  1142


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