BAC Information

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BAC

Clone NameB6Ng01-213H13
Chromosome10 (Build37)
Map Location 104,593,029 - 104,720,770
singlet/doubletdoublet
Overlap geneTmtc2
Upstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
Downstream geneEG627573, BC067068, Ccdc59, EG667758, EG639162
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213H13.bB6Ng01-213H13.g
ACCGA030990GA030991
length6781,041
definitionB6Ng01-213H13.b B6Ng01-213H13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,720,093 - 104,720,770)(104,593,029 - 104,594,058)
sequence
gaattctgttgccactgatggctttcagcatgtatatttttgctgtcatt
caggcctctgtgctttctatcacccatccaacatatttcccaacaagaat
atgcatttatatagtattttgggggactttccagccaccagaactgttaa
gaaatccatttgtgttgtttatttcttaaagacttgggctttgagccctt
gcttttttgcaagacagttaacattcttggtgcattttggccatttacca
tgtatctggcctttggcttaattgttgattaaacaattcttctaaagtgg
tttacaattagagagggaattacgaatggcaattaaagtacagacgtgtc
acaaccaaagtaggaatcaagtggtaagcttacctagaaggaaaaggccc
agtttgaagaaactaggcgcttataattaggccatggtatctatagatgg
aaagttatctagaaaagctcaaactgtgaggcggggagttcatttacctt
tttaatttttaattacactgtgagaagctaaaggccaggtctgctttgat
atgtaaaatatacatctcagaatcttgaaataccaagatccaagatgcag
gggatataaagtgataattccaaccactcagagaaaaaggggaagagaga
tgggagaagggttgtgggagagggtgat
gaattccaggaagtggatactggtgacttatcctatgatcatagctgtgg
gatttagagatttttattataatttgatttgggtttgctggtggactcca
tgtacaggtgatgaggaagaggtgatgagaatcaggccgactctggtttg
cctgaccccaacagggagatgaatggtggagtcacatacaaacgtaagat
gaatagtttctagaaagaaagaactgcaaacatctgttgtttctgagaca
gatgttacctaaggtttggtaggtcagccagatgaatgctatccttaggg
gatagttttgaggtacctatcttattgcaggatcatttcttttcatatcc
cttctcaggaatagtgggtatgccttttatcttccatccagcagtgtgac
cccttgagtgttgaaacatcgtcttcttcatcgtcgtttcccacactttt
gatactcatcactggtggcaagtttgcatgcatgcatgagtaaatgctag
gaacttaaatgccaggactgaacttgtacatttccaattgtactatataa
tcatattatgaatattctcaatattaataatcatatgatctttactcccc
ttttgtgctgccaaacagctgtgtcgatgacaaacactgagattaatatc
tgcaaagcgtatggacaatcatctaataaaacccctctttttcactggtt
aggaaatgagggtccagaccaagtaattgaggataaagttgtgtcagggc
ttggactagaccccaagtttgtctgactacatgaagaagtgatcattcta
ttacttgatattcttcagatcgaaatccaataaaaatgttcaattttgtt
tgcttggccatagatattactaaaacattcacacacacacacaaatcaca
ttgtttaaattacaaacttgggtcatgaaataatttctctttgaaattaa
caaaatgttgaatatttaacacacctaatttttaatttacttacttcaaa
ggaactctataaattaaataccaaaacaatatcctacatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104720093_104720770
seq2: B6Ng01-213H13.b_42_719 (reverse)

seq1  ATCACCCTCTCCCACAACCCTTCTCCCATCTCTCTTCCCCTTTTTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCTCTCCCACAACCCTTCTCCCATCTCTCTTCCCCTTTTTCTCTG  50

seq1  AGTGGTTGGAATTATCACTTTATATCCCCTGCATCTTGGATCTTGGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTGGAATTATCACTTTATATCCCCTGCATCTTGGATCTTGGTATT  100

seq1  TCAAGATTCTGAGATGTATATTTTACATATCAAAGCAGACCTGGCCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTCTGAGATGTATATTTTACATATCAAAGCAGACCTGGCCTTTA  150

seq1  GCTTCTCACAGTGTAATTAAAAATTAAAAAGGTAAATGAACTCCCCGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCACAGTGTAATTAAAAATTAAAAAGGTAAATGAACTCCCCGCCT  200

seq1  CACAGTTTGAGCTTTTCTAGATAACTTTCCATCTATAGATACCATGGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTGAGCTTTTCTAGATAACTTTCCATCTATAGATACCATGGCCT  250

seq1  AATTATAAGCGCCTAGTTTCTTCAAACTGGGCCTTTTCCTTCTAGGTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAGCGCCTAGTTTCTTCAAACTGGGCCTTTTCCTTCTAGGTAAG  300

seq1  CTTACCACTTGATTCCTACTTTGGTTGTGACACGTCTGTACTTTAATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCACTTGATTCCTACTTTGGTTGTGACACGTCTGTACTTTAATTGC  350

seq1  CATTCGTAATTCCCTCTCTAATTGTAAACCACTTTAGAAGAATTGTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGTAATTCCCTCTCTAATTGTAAACCACTTTAGAAGAATTGTTTAA  400

seq1  TCAACAATTAAGCCAAAGGCCAGATACATGGTAAATGGCCAAAATGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATTAAGCCAAAGGCCAGATACATGGTAAATGGCCAAAATGCACC  450

seq1  AAGAATGTTAACTGTCTTGCAAAAAAGCAAGGGCTCAAAGCCCAAGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTTAACTGTCTTGCAAAAAAGCAAGGGCTCAAAGCCCAAGTCTT  500

seq1  TAAGAAATAAACAACACAAATGGATTTCTTAACAGTTCTGGTGGCTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATAAACAACACAAATGGATTTCTTAACAGTTCTGGTGGCTGGAA  550

seq1  AGTCCCCCAAAATACTATATAAATGCATATTCTTGTTGGGAAATATGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCCAAAATACTATATAAATGCATATTCTTGTTGGGAAATATGTTG  600

seq1  GATGGGTGATAGAAAGCACAGAGGCCTGAATGACAGCAAAAATATACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTGATAGAAAGCACAGAGGCCTGAATGACAGCAAAAATATACATG  650

seq1  CTGAAAGCCATCAGTGGCAACAGAATTC  678
      ||||||||||||||||||||||||||||
seq2  CTGAAAGCCATCAGTGGCAACAGAATTC  678

seq1: chr10_104593029_104594058
seq2: B6Ng01-213H13.g_66_1106

seq1  GAATTCCAGGAAGTGGATACTGGTGACTTATCCTATGATCATAGCTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAAGTGGATACTGGTGACTTATCCTATGATCATAGCTGTGG  50

seq1  GATTTAGAGATTTTTATTATAATTTGATTTGGGTTTGCTGGTGGACTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAGATTTTTATTATAATTTGATTTGGGTTTGCTGGTGGACTCCA  100

seq1  TGTACAGGTGATGAGGAAGAGGTGATGAGAATCAGGCCGACTCTGGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGGTGATGAGGAAGAGGTGATGAGAATCAGGCCGACTCTGGTTTG  150

seq1  CCTGACCCCAACAGGGAGATGAATGGTGGAGTCACATACAAACGTAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCCCAACAGGGAGATGAATGGTGGAGTCACATACAAACGTAAGAT  200

seq1  GAATAGTTTCTAGAAAGAAAGAACTGCAAACATCTGTTGTTTCTGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTTTCTAGAAAGAAAGAACTGCAAACATCTGTTGTTTCTGAGACA  250

seq1  GATGTTACCTAAGGTTTGGTAGGTCAGCCAGATGAATGCTATCCTTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTACCTAAGGTTTGGTAGGTCAGCCAGATGAATGCTATCCTTAGGG  300

seq1  GATAGTTTTGAGGTACCTATCTTATTGCAGGATCATTTCTTTTCATATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTTTGAGGTACCTATCTTATTGCAGGATCATTTCTTTTCATATCC  350

seq1  CTTCTCAGGAATAGTGGGTATGCCTTTTATCTTCCATCCAGCAGTGTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGGAATAGTGGGTATGCCTTTTATCTTCCATCCAGCAGTGTGAC  400

seq1  CCCTTGAGTGTTGAAACATCGTCTTCTTCATCGTCGTTTCCCACACTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAGTGTTGAAACATCGTCTTCTTCATCGTCGTTTCCCACACTTTT  450

seq1  GATACTCATCACTGGTGGCAAGTTTGCATGCATGCATGAGTAAATGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCATCACTGGTGGCAAGTTTGCATGCATGCATGAGTAAATGCTAG  500

seq1  GAACTTAAATGCCAGGACTGAACTTGTACATTTCCAATTGTACTATATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAAATGCCAGGACTGAACTTGTACATTTCCAATTGTACTATATAA  550

seq1  TCATATTATGAATATTCTCAATATTAATAATCATATGATCTTTACTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTATGAATATTCTCAATATTAATAATCATATGATCTTTACTCCCC  600

seq1  TTTTGTGCTGCCAAACAGCTGTGTCGATGACAAACACTGAGATTAATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGCTGCCAAACAGCTGTGTCGATGACAAACACTGAGATTAATATC  650

seq1  TGCAAAGCGTATGGACAATCATCTAATAAAACCCCTC-TTTTCACTGGTT  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCAAAGCGTATGGACAATCATCTAATAAAACCCCTCTTTTTCACTGGTT  700

seq1  AGGAAATGAGGGTCCAGACCAAGTAATTGAGGATAAAGTTGTGTCAGGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGAGGGTCCAGACCAAGTAATTGAGGATAAAGTTGTGTCAGGGC  750

seq1  TTGGACTAGACCCCAAG-TTGTCTGACTACATGAAGAAGTGATCATTCTA  798
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTGGACTAGACCCCAAGTTTGTCTGACTACATGAAGAAGTGATCATTCTA  800

seq1  TTACTTGATATTCTTCAGATCGAAATCCAATAAAAATGTTCAA-TTTGTT  847
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTACTTGATATTCTTCAGATCGAAATCCAATAAAAATGTTCAATTTTGTT  850

seq1  TGCTTGG-CATAGATATAACTAAAACATTCACACACACACACAAATCACA  896
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  TGCTTGGCCATAGATATTACTAAAACATTCACACACACACACAAATCACA  900

seq1  TTGTTTAAATTACAAACTT-GGTCATGAAATAAATTCTCTTTGAAATTAA  945
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  TTGTTTAAATTACAAACTTGGGTCATGAAATAATTTCTCTTTGAAATTAA  950

seq1  CAAAATGTGAAATA-TTAACACA-CTAATTTTTAATTTACTTAC-TCAAA  992
      ||||||||  |||| |||||||| |||||||||||||||||||| |||||
seq2  CAAAATGTTGAATATTTAACACACCTAATTTTTAATTTACTTACTTCAAA  1000

seq1  GG-ACTTCATAAATTAAATA-CAAAAAAATAT-CTACATAC  1030
      || |||  |||||||||||| ||||| ||||| ||||||||
seq2  GGAACTCTATAAATTAAATACCAAAACAATATCCTACATAC  1041