BAC Information

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BAC

Clone NameB6Ng01-213K06
Chromosome10 (Build37)
Map Location 43,352,903 - 43,353,016
singlet/doubletsinglet
Overlap geneEG668190
Upstream geneOstm1, Sec63, Scml4, EG666569, C230040G06, Sobp, 9030612E09Rik, Pdss2, LOC100042155, AK122525, LOC100042179, 1700021F05Rik, Cd24a
Downstream geneLOC100041418, 1700027J07Rik, EG668192, Qrsl1, Rtn4ip1, Aim1, LOC546475, Speer5-ps1, Atg5, LOC100041506, Prdm1, LOC546476
LinkOpen Mouse BAC browser

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BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213K06.bB6Ng01-213K06.g
ACCGA031104GA031105
length1,069795
definitionB6Ng01-213K06.b B6Ng01-213K06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgctcagttctgagccccatttttaatggggttatttgattt
ttctggagtccacctttttgagttctttatatatattggatattagtccc
ttatctgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaagctctccaatttta
tgaggtcccatttatagattctcgatcttacagcacaagcctttgctgtt
ctattcaggaattttccccctgtacccatatcttagaggcttttccctac
tttttcctctataagtttcagtgtctctggtttattgtgtagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaattttc
attcttctacatgataaccaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
gaccgtaggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagaaccatgcagtttttatcacagttgc
tctgtagtacagctttaggtccggcatggtgattccaccagaggtttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatctgccgattgcccttttctaatttcattgaagaattgagttggcat
tttgatggggattgcattgaatcagaaaatgaaaagggaaacataacaac
agatcctgaagaaatccaatacaccatcagatcctttctatcaagctata
ctcaacataaactggagaacctggatgaaatggagaagtttctagacaga
taccaaggttccaagttgaatcaagatcaggttaatgatctaaacgtcca
tatcccccaaagaaatagagcagtcatttaatagtcccccactaaaaacg
tcccaggaccatatgggtttgtgcaaaatctatatagaatctccaagaaa
agattaatcccagtttttc
gaattcatctgggcaagcaatggtaaagttggatgcattttacttactgt
agcaatctccatgttaactatgggtatgtttagattgttgttcttttctt
gttttaattttggtggttggtttgaatctacaaacttgtttatttcatta
agtttttctaacttaatgggaattgaacttttaaaaacgtattcccttat
aatctaaatttctttgatgtaaaattgtttttaaggtcatttctgattct
gtttatttgagtcattttatactttcttttgatggttgagccaagggtgt
atcagtcttgtttatatttttgaacactcagtttctatattacttgattg
tttcatagtttatatttatttatttactttgggttctgattttattattt
ttcagtgacatttttcagtttggatttgtttagtccttgtttttctatat
ttttgagttgcattgttaagtctgttatgatttcttaaaatgcatacact
taaaccattattttctcttattgaagtagatttaatgtattagagagaat
tttgtgtatgtttaccattttaatttagaaacctatcaaaacaatttctc
ttgatttctttaatccattcataattcagtaagaagtcattcaatctcca
taaatttgtgcacttaatagagaatttgtgttctgtcagtcataaattcc
agcgcattgtggtcagatagaatatgcaaagctattttcattgttcatga
attagttaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_43352903_43353016
seq2: B6Ng01-213K06.g_710_860 (reverse)

seq1  CGCACACACACACACACACACACACACACACACA------------CACA  38
      ||||||||||||||||||||||||||||||||||            ||  
seq2  CGCACACACACACACACACACACACACACACACATTTTAACTAATTCATG  50

seq1  CACA---------------CA-CTTCCACCTG--CACAGGAGGCTGAAGT  70
       |||               ||  ||| | |||  ||||    |||| | |
seq2  AACAATGAAAATAGCTTTGCATATTCTATCTGACCACAATGCGCTGGAAT  100

seq1  -------GGGTAGATATCAAATTCAAGGTTAGCCTTTGAAATTTATGGAG  113
              |  |||   |||||||    |||       ||||||||||||
seq2  TTATGACTGACAGAACACAAATTCTCTATTAAGTGCACAAATTTATGGAG  150

seq1  A  114
      |
seq2  A  151