BAC Information

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BAC

Clone NameB6Ng01-214J21
Chromosome10 (Build37)
Map Location 22,736,106 - 22,860,256
singlet/doubletdoublet
Overlap geneEya4
Upstream geneLOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
Downstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214J21.bB6Ng01-214J21.g
ACCGA031821GA031822
length1,149746
definitionB6Ng01-214J21.b B6Ng01-214J21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,859,104 - 22,860,256)(22,736,106 - 22,736,851)
sequence
gaattcagtaagaaggactgtccagtttgcaagtggggtgcagggctaat
tcagaagacaccgtgttgtgtgaaatgtggcccaaagggaggtgagacta
gacctaaacacagaaaaaatgggggtgaaagtacagacaggaagcttgag
ggtactagaggcattctgggttctatgaggaagtcaatgaatgacctata
cattatttttactaaattacaactttacatatttgaactataatttttgt
cacaaagaggtcattaatgtataggaatttgttaagtgataatgaagact
tgtagttgttctaaaactaaactgttcttcttggcacaccatgctattta
taggagagtttgatacagtgcagagtccctccacaccaatcaaagatctc
gatgacagaacatgtagaagttctgggtcaaagtctcgaggaagaggccg
gaaaaataatccctccccacctccggacagtgacctagaggtatgcctgc
ttatcgctgtagaatgtaagttactttagtttactgaatggaatagtcat
actttaaatacctagtaagttttgaaatttctatctatctatctatctat
ctatctatctatagcaaaatttaaaacaataaagtcagaggtaacaatac
tttgaaagttaaagactgataatttcattttttattcaaactgaaaaaag
ttaaaaaataaagctatgacttatgcgataatatccttagagaaagattc
tagaaagataaagaaatctgtgttgaaaggaaaatagtaaaatcttgtca
atgaatatatgtgttaaaatctgtcatatttgtggattttaaagtactct
ttttcatttgtgagctctgtgaaatgtaactacattgagcaagttgagtt
tctattatagaaatctatcattagccataatatgttcatacacaatcaca
aagttcaactgaagaaaaggattaatctccagattgtacacaatcgatag
cacacattgtgcctcttcctacgagatatgtatgaatataccaaagagat
gaaatgtgttctgatgcctactgctatgaccctgaaagaaggacagcgag
cagccaaactgacagagctgggataagacactgggccattccaagtaga
gaattcctgtttatttccccactagtgacttgatcacagtagtccttttc
atacctattttttctactaaaagcttatgcttttagtagatggcttggct
tcagcagaatgccttttctctgagaaacaccactgaattatttattaagg
aagcaggagtttcattaggatcctagttctgtcacagatgtattctccag
gggcacacgtgactctcaggattcctaatggcttaaccccttgggagcca
cttcctccacatacacatttgctaattacagcttatgactgctttgggag
aaaaccaaacacataaacatcacatattattcaaattgctaattctaaag
gaaactaaagacttctgtggatccctgaaagcattgtgtgttctgagcat
gagacctccttagccagatatttaaaaaagacaaagtaggtgggcaattg
tggctcacacctttactcccaacactatcaaggcagctggatctctgagt
tccaggccagcctggtctccagagtgagtttcaggacagccagggctaca
tagagaaaccctgtctcaaaaaagtgaagttatttccttcttccttaatt
ttcctttcttttcttcctttcagacttttagcattgtcagttcataagca
cactcatgtgtgcatgtgtgtgcatgtgtgtgtgtgtgcatgtgcatgtg
tgcatgtgcgtgtgtgtgcgtgcgcatgcacgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_22859104_22860256
seq2: B6Ng01-214J21.b_49_1197 (reverse)

seq1  TCTACTCTGGAATGGGCCAGTGTCTCTAT-CCAGCTCCCTGTCAGTTGGG  49
      |||||| |||||||| ||||||||| ||| ||||||  ||||||||| ||
seq2  TCTACT-TGGAATGGCCCAGTGTCT-TATCCCAGCT--CTGTCAGTTTGG  46

seq1  CTGCCTCGCTGTCC-TCTTTCA-GGTCATACCAGTAGGCATCAGAACACA  97
      ||| |||||||||| ||||||| ||||||| |||||||||||||||||||
seq2  CTG-CTCGCTGTCCTTCTTTCAGGGTCATAGCAGTAGGCATCAGAACACA  95

seq1  TTTCATCTCTTTGGTATATTCATACATATCTCGTAGGAAGAGGCACAATG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTCTTTGGTATATTCATACATATCTCGTAGGAAGAGGCACAATG  145

seq1  TGTGCTATTCGATTTGTGTTACATCTGGAGATTAATCCTTTTCTTCAGTT  197
      ||||||| |||| ||||||   ||||||||||||||||||||||||||||
seq2  TGTGCTA-TCGA-TTGTGTACAATCTGGAGATTAATCCTTTTCTTCAGTT  193

seq1  GAACTTTGTGATTGTGTATGAACATATTATGGCTAATGATAGATTTCTAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTGTGATTGTGTATGAACATATTATGGCTAATGATAGATTTCTAT  243

seq1  AATAGAAACTCAACTTGCTCAATGTAGTTACATTTCACAGAGCTCACAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAACTCAACTTGCTCAATGTAGTTACATTTCACAGAGCTCACAAA  293

seq1  TGAAAAAGAGTACTTTAAAATCCACAAATATGACAGATTTTAACACATAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGAGTACTTTAAAATCCACAAATATGACAGATTTTAACACATAT  343

seq1  ATTCATTGACAAGATTTTACTATTTTCCTTTCAACACAGATTTCTTTATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGACAAGATTTTACTATTTTCCTTTCAACACAGATTTCTTTATC  393

seq1  TTTCTAGAATCTTTCTCTAAGGATATTATCGCATAAGTCATAGCTTTATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGAATCTTTCTCTAAGGATATTATCGCATAAGTCATAGCTTTATT  443

seq1  TTTTAACTTTTTTCAGTTTGAATAAAAAATGAAATTATCAGTCTTTAACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTTTTTTCAGTTTGAATAAAAAATGAAATTATCAGTCTTTAACT  493

seq1  TTCAAAGTATTGTTACCTCTGACTTTATTGTTTTAAATTTTGCTATAGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTATTGTTACCTCTGACTTTATTGTTTTAAATTTTGCTATAGAT  543

seq1  AGATAGATAGATAGATAGATAGATAGAAATTTCAAAACTTACTAGGTATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGAAATTTCAAAACTTACTAGGTATT  593

seq1  TAAAGTATGACTATTCCATTCAGTAAACTAAAGTAACTTACATTCTACAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATGACTATTCCATTCAGTAAACTAAAGTAACTTACATTCTACAG  643

seq1  CGATAAGCAGGCATACCTCTAGGTCACTGTCCGGAGGTGGGGAGGGATTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAAGCAGGCATACCTCTAGGTCACTGTCCGGAGGTGGGGAGGGATTA  693

seq1  TTTTTCCGGCCTCTTCCTCGAGACTTTGACCCAGAACTTCTACATGTTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCGGCCTCTTCCTCGAGACTTTGACCCAGAACTTCTACATGTTCT  743

seq1  GTCATCGAGATCTTTGATTGGTGTGGAGGGACTCTGCACTGTATCAAACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCGAGATCTTTGATTGGTGTGGAGGGACTCTGCACTGTATCAAACT  793

seq1  CTCCTATAAATAGCATGGTGTGCCAAGAAGAACAGTTTAGTTTTAGAACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATAAATAGCATGGTGTGCCAAGAAGAACAGTTTAGTTTTAGAACA  843

seq1  ACTACAAGTCTTCATTATCACTTAACAAATTCCTATACATTAATGACCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAGTCTTCATTATCACTTAACAAATTCCTATACATTAATGACCTC  893

seq1  TTTGTGACAAAAATTATAGTTCAAATATGTAAAGTTGTAATTTAGTAAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACAAAAATTATAGTTCAAATATGTAAAGTTGTAATTTAGTAAAA  943

seq1  ATAATGTATAGGTCATTCATTGACTTCCTCATAGAACCCAGAATGCCTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATAGGTCATTCATTGACTTCCTCATAGAACCCAGAATGCCTCT  993

seq1  AGTACCCTCAAGCTTCCTGTCTGTACTTTCACCCCCATTTTTTCTGTGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCTCAAGCTTCCTGTCTGTACTTTCACCCCCATTTTTTCTGTGTT  1043

seq1  TAGGTCTAGTCTCACCTCCCTTTGGGCCACATTTCACACAACACGGTGTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTAGTCTCACCTCCCTTTGGGCCACATTTCACACAACACGGTGTC  1093

seq1  TTCTGAATTAGCCCTGCACCCCACTTGCAAACTGGACAGTCCTTCTTACT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATTAGCCCTGCACCCCACTTGCAAACTGGACAGTCCTTCTTACT  1143

seq1  GAATTC  1153
      ||||||
seq2  GAATTC  1149

seq1: chr10_22736106_22736851
seq2: B6Ng01-214J21.g_63_808

seq1  GAATTCCTGTTTATTTCCCCACTAGTGACTTGATCACAGTAGTCCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTATTTCCCCACTAGTGACTTGATCACAGTAGTCCTTTTC  50

seq1  ATACCTATTTTTTCTACTAAAAGCTTATGCTTTTAGTAGATGGCTTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTATTTTTTCTACTAAAAGCTTATGCTTTTAGTAGATGGCTTGGCT  100

seq1  TCAGCAGAATGCCTTTTCTCTGAGAAACACCACTGAATTATTTATTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGAATGCCTTTTCTCTGAGAAACACCACTGAATTATTTATTAAGG  150

seq1  AAGCAGGAGTTTCATTAGGATCCTAGTTCTGTCACAGATGTATTCTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGAGTTTCATTAGGATCCTAGTTCTGTCACAGATGTATTCTCCAG  200

seq1  GGGCACACGTGACTCTCAGGATTCCTAATGGCTTAACCCCTTGGGAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACACGTGACTCTCAGGATTCCTAATGGCTTAACCCCTTGGGAGCCA  250

seq1  CTTCCTCCACATACACATTTGCTAATTACAGCTTATGACTGCTTTGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCACATACACATTTGCTAATTACAGCTTATGACTGCTTTGGGAG  300

seq1  AAAACCAAACACATAAACATCACATATTATTCAAATTGCTAATTCTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAACACATAAACATCACATATTATTCAAATTGCTAATTCTAAAG  350

seq1  GAAACTAAAGACTTCTGTGGATCCCTGAAAGCATTGTGTGTTCTGAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAAGACTTCTGTGGATCCCTGAAAGCATTGTGTGTTCTGAGCAT  400

seq1  GAGACCTCCTTAGCCAGATATTTAAAAAAGACAAAGTAGGTGGGCAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTCCTTAGCCAGATATTTAAAAAAGACAAAGTAGGTGGGCAATTG  450

seq1  TGGCTCACACCTTTACTCCCAACACTATCAAGGCAGCTGGATCTCTGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCACACCTTTACTCCCAACACTATCAAGGCAGCTGGATCTCTGAGT  500

seq1  TCCAGGCCAGCCTGGTCTCCAGAGTGAGTTTCAGGACAGCCAGGGCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCCAGCCTGGTCTCCAGAGTGAGTTTCAGGACAGCCAGGGCTACA  550

seq1  TAGAGAAACCCTGTCTCAAAAAAGTGAAGTTATTTCCTTCTTCCTTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAACCCTGTCTCAAAAAAGTGAAGTTATTTCCTTCTTCCTTAATT  600

seq1  TTCCTTTCTTTTCTTCCTTTCAGACTTTTAGCATTGTCAGTTCATAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTTTTCTTCCTTTCAGACTTTTAGCATTGTCAGTTCATAAGCA  650

seq1  CACTCATGTGTGCATGTGTGTGCATGTGTGTGTGTGTGCATGTGCATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATGTGTGCATGTGTGTGCATGTGTGTGTGTGTGCATGTGCATGTG  700

seq1  TGCATGTGCGTGTGTGTGCGTGCGCATGCACGTGTGTGTGTGTGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGCGTGTGTGTGCGTGCGCATGCACGTGTGTGTGTGTGTG  746