MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-216L19
Chromosome	10 (Build37)
Map Location	6,993,500 - 7,207,284
singlet/doublet	doublet
Overlap gene	EG666520, LOC100039303, LOC670558, LOC626333, LOC666541
Upstream gene	Akap12, Mthfd1l, Plekhg1, Iyd, Ppp1r14c
Downstream gene	9230019H11Rik, LOC100041405, LOC672213, Lrp11, Pcmt1, Nup43, Lats1, Katna1, BC013529, Ppil4, LOC665035, Zc3h12d, Map3k7ip2, LOC100039046, Ust
Link	Open Mouse BAC browser

Click to get alignment info.

name	Akap12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83397 MGI:1932576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mthfd1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270685 MGI:1924836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekhg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213783 MGI:2676551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iyd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70337 MGI:1917587
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp1r14c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76142 MGI:1923392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666520 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666520 MGI:3647703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100039303 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039303
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 175 ESTs, 5 Proteins

name	LOC670558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC626333 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626333
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC666541 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666541
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	9230019H11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215728 MGI:3588256
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100041405 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041405
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC672213 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Lrp11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237253 MGI:2442989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcmt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18537 MGI:97502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69912 MGI:1917162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lats1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16798 MGI:1333883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 11 Proteins

name	Katna1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23924 MGI:1344353
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC013529 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215751 MGI:2384905
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppil4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67418 MGI:1914668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665035 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins pseudo : _no_value

name	Zc3h12d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237256 MGI:3045313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map3k7ip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68652 MGI:1915902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039046 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039046
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ust (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338362 MGI:2442406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akap12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130742 GeneID:83397 MGI:1932576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein (gravin) 12 transcript_id : NM_031185.2

name	Mthfd1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363942 GeneID:270685 MGI:1924836
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like transcript_id : NM_172308.3

name	Plekhg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802743 GeneID:213783 MGI:2676551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family G (with RhoGef domain) member 1 transcript_id : NM_001033253.2

name	Iyd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383992 GeneID:70337 MGI:1917587
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : iodotyrosine deiodinase transcript_id : NM_027391.2

name	Ppp1r14c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130995 GeneID:76142 MGI:1923392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 14c transcript_id : NM_133485.2

name	EG666520 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387906 GeneID:666520 MGI:3647703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666520 transcript_id : XM_984367.1

name	LOC100039303 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260610 GeneID:100039303
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 175 ESTs, 5 Proteins product : similar to ribosomal protein L35a transcript_id : XM_001472599.1

name	LOC670558 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260619 GeneID:670558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to histocompatibility antigen 60 transcript_id : XM_001476279.1

name	Lrp11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129948 GeneID:237253 MGI:2442989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein receptor-related protein 11 transcript_id : NM_172784.2

name	Pcmt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679216 GeneID:18537 MGI:97502
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 transcript_id : NM_008786.1

name	Nup43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21844544 GeneID:69912 MGI:1917162
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 43 transcript_id : NM_145706.1

name	Lats1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387911 GeneID:16798 MGI:1333883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 11 Proteins product : large tumor suppressor, transcript variant 1 transcript_id : XM_618738.3

name	Katna1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754409 GeneID:23924 MGI:1344353
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : katanin p60 (ATPase-containing) subunit A1 transcript_id : NM_011835.1

name	BC013529 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803030 GeneID:215751 MGI:2384905
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC013529 transcript_id : NM_145418.2

name	Ppil4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27532957 GeneID:67418 MGI:1914668
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase (cyclophilin)-like 4 transcript_id : NM_026141.2

name	Zc3h12d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349143 GeneID:237256 MGI:3045313
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger CCCH type containing 12D transcript_id : NM_172785.2

name	Map3k7ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892382 GeneID:68652 MGI:1915902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase kinase kinase 7 interacting protein 2 transcript_id : NM_138667.2

name	Ust (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110556630 GeneID:338362 MGI:2442406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uronyl-2-sulfotransferase transcript_id : NM_177387.3

name	Akap12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13626040 CCDS:CCDS23680.1 GeneID:83397 MGI:1932576
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0030159 - receptor signaling complex scaffold activity [Evidence TAS] GO_process : GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 note : gercelin; v-src suppressed transcript 5; testis specific gene A12 product : A kinase (PRKA) anchor protein (gravin) 12 protein_id : NP_112462.1

name	Mthfd1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559887 CCDS:CCDS23681.1 GeneID:270685 MGI:1924836
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence ISS] GO_process : GO:0009257 - 10-formyltetrahydrofolate biosynthesis [Evidence ISS] codon_start : 1 exception : mismatches in translation note : formyltetrahydrofolate synthetase domain containing 1 product : methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein_id : NP_758512.2

name	Plekhg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794546 CCDS:CCDS23682.1 GeneID:213783 MGI:2676551
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 product : pleckstrin homology domain containing, family G (with RhoGef domain) member 1 protein_id : NP_001028425.1

name	Iyd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312562 CCDS:CCDS23683.1 GeneID:70337 MGI:1917587
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : iodotyrosine dehalogenase 1 protein protein_id : NP_081667.1

name	Ppp1r14c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19311014 CCDS:CCDS23684.1 GeneID:76142 MGI:1923392
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA]; GO:0004865 - type 1 serine/threonine specific protein phosphatase inhibitor activity [Evidence IDA] GO_process : GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 product : PKC-potentiated PP1 inhibitory protein protein_id : NP_597844.1

name	EG666520 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94387907 GeneID:666520 MGI:3647703
definition	codon_start : 1 product : hypothetical protein protein_id : XP_989461.1

name	LOC100039303 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260611 GeneID:100039303
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472649.1

name	LOC670558 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260620 GeneID:670558
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476329.1

name	Lrp11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542055 CCDS:CCDS23686.1 GeneID:237253 MGI:2442989
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 product : low density lipoprotein receptor-related protein 11 protein_id : NP_766372.1

name	Pcmt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679217 CCDS:CCDS23687.1 GeneID:18537 MGI:97502
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006479 - protein amino acid methylation [Evidence IDA]; GO:0006464 - protein modification [Evidence IEA] codon_start : 1 exception : mismatches in translation note : protein carboxyl methyltransferase product : protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 protein_id : NP_032812.1

name	Nup43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21844545 GeneID:69912 MGI:1917162
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : nucleoporin 43kDa product : nucleoporin Nup43 protein_id : NP_663752.1

name	Lats1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82932138 GeneID:16798 MGI:1333883
definition	codon_start : 1 product : large tumor supressor isoform 1 protein_id : XP_618738.2

name	Katna1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754410 CCDS:CCDS23689.1 GeneID:23924 MGI:1344353
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005813 - centrosome [Evidence IDA]; GO:0005811 - lipid particle [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IDA]; GO:0045502 - dynein binding [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008568 - microtubule-severing ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0031122 - cytoplasmic microtubule organization and biogenesis [Evidence IDA]; GO:0007067 - mitosis [Evidence IEA]; GO:0001764 - neuron migration [Evidence IMP]; GO:0008104 - protein localization [Evidence IPI] codon_start : 1 exception : mismatches in translation product : katanin p60 (ATPase-containing) subunit A1 protein_id : NP_035965.1

name	BC013529 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703834 GeneID:215751 MGI:2384905
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC215751 protein_id : NP_663393.1

name	Ppil4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312976 CCDS:CCDS23690.1 GeneID:67418 MGI:1914668
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : peptidylprolyl isomerase-like 4 protein_id : NP_080417.1

name	Zc3h12d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370166 GeneID:237256 MGI:3045313
definition	codon_start : 1 exception : mismatches in translation product : zinc finger CCCH-type containing 12D protein_id : NP_766373.1

name	Map3k7ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149752 CCDS:CCDS23691.1 GeneID:68652 MGI:1915902
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : Tak1 binding protein 2 product : mitogen-activated protein kinase kinase kinase 7 interacting protein 2 protein_id : NP_619608.1

name	Ust (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110556631 GeneID:338362 MGI:2442406
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : uronyl-2-sulfotransferase protein_id : NP_796361.2

name	LOC626333 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626333
definition	number : 1 pseudo : _no_value

name	LOC626333 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626333
definition	number : 2 pseudo : _no_value

name	LOC626333 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626333
definition	number : 3 pseudo : _no_value

name	LOC626333 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626333
definition	number : 4 pseudo : _no_value

name	LOC666541 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666541
definition	number : 1 pseudo : _no_value

name	LOC666541 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666541
definition	number : 2 pseudo : _no_value

name	LOC666541 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666541
definition	number : 3 pseudo : _no_value

name	LOC666541 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666541
definition	number : 4 pseudo : _no_value

name	LOC666541 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666541
definition	number : 5 pseudo : _no_value

name	LOC100041405 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041405
definition	number : 1 pseudo : _no_value

name	LOC100041405 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041405
definition	number : 2 pseudo : _no_value

name	LOC672213 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672213
definition	number : 6 pseudo : _no_value

name	LOC672213 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672213
definition	number : 5 pseudo : _no_value

name	LOC672213 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672213
definition	number : 4 pseudo : _no_value

name	LOC672213 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672213
definition	number : 3 pseudo : _no_value

name	LOC672213 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672213
definition	number : 2 pseudo : _no_value

name	LOC672213 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672213
definition	number : 1 pseudo : _no_value

name	LOC100039046 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039046
definition	number : 1 pseudo : _no_value

name	LOC100039046 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039046
definition	number : 2 pseudo : _no_value

name	9230019H11Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260612 GeneID:215728 MGI:3588256
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 9230019H11 gene transcript_id : XR_035195.1

name	LOC665035 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260626 GeneID:665035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_030610.1

clone name	MSMg01-126A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124L23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209E16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-519I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510C21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-545E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-164E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192F22
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-216L19.b	B6Ng01-216L19.g
ACC	GA033347	GA033348
length	1,114	1,072
definition	B6Ng01-216L19.b	B6Ng01-216L19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(7,206,180 - 7,207,284)	(6,993,500 - 6,994,573)
sequence	gaattcattgagcagaactggacttgctactgtcctcttcaaaaaatata aaatgtatgctttaaacagataggatatatacaaaaagctgggttcacat cagatacccagggggtaaaaagcgcagatggcagatacatcattctgtgt aagagatggcgttgctccacacagcttttgaaatcctgtagctgtcctgg ctcctcctacttcacagctgggtttttgggaggaaggagtttgtatgtgt tgaagtagcccaccacctgctagggaatttctgccaagacacactgagca agtgtttcttttggagcattctgaactgtctgaaaggcacagactgaaca atatctcttatggtcacctcacctgatggggcacggagccttccaccatc accatctagaaactccatggcactgaagtcagctctccgaagtcccacaa tgatgatagacatgggcagcttggctgcattgacgattgcctgtctggtt tcatcaaggtctgcgatcacgccatcggtgatggatacaagcagaaagta ttgagaagtggtctgctgctgtgtggctgcagctgcaaacctggccacgt ggttataattggagaaaaattagttgatccacagagtcttatctgaggaa gacaggtctgataagcctctataatgccttgattccattgcaataggggt tcgaggggttaaagtccattgggaattcatgagacacctgccactgaggg ggcacctgagcttcaaagccaaaagctggagacatttttttcaacatcat aatcttgaattgccaatcccacttgagcagatggcactcaaatactcatt aacactatttagggctgatgtaatgcagggagtctggagaactggggttc accatttagagccagtgaagtccattcccgcagtaaaattgagctgacca cctttcccatgatgtagtcaagaaatgtgccattctacagtaatctcatg atgcttcacgctgataacacctgaattcttgaaagctttctttctctggt ctctatttttcaattaagcataatattcaacctgatggtttctgggaagc ttctttgagatttg	tgtcttcctcagaaggatcctgagtgtttgcaacaaattagaaggaaccc tgagcttcattgaaaggctgaagtgtctgtttgctgtaaaagccatcttt ggagacattcccctagacacagagtattcagaaaagaaatgacatttcag agacatttaagaccaaggccaggaatcgaattgtgtttgtaagatcaaga ctaatggcttgcttttaccgaacatccaaggtcttaacaaatttctgcat gcacattcgaaaaaacaatggtctctagggaacttagataatgaagacca ttagcaaatgtgatatggtaatatatgaatatatgaatatatcaatcatg tttatgtatggactatagataggctatagctagatagctggcccttttgg cataaagtgataagtcagaaaaccttgaataactacgtttgttttctggg aagtaagtagcagcatcagcagagcatgcccaggttctatggagcactcg tctcatctggtctgggtgtctcatgctctactcctccacctgctgctttg ccagtaactgtgttcattagcacaagctgagtgctgcagcagatgcccaa aatacataacagttccaccatggtgggccatcattccgtgcttacctgtt aatccagagaagtcaacagcccttctccacttttttatctgttcctggga gctctgtgccatcaagtcttcatgctgaagtttaggtcacttgaaggtca gactgggtgctgaaatcactcaccaggagacacaagcctggaagatagca caggatgcatctttcatgggccaagcagaggatgacaagtatctgttccg cccaataagttgggccattcctaatggcagagagacctgggacccagtgc agggaggcaaggcaagctcagatcttggggtgagtgcttaaaggtcttct accctggatagttatgaagattgaggccacacgttttgtaccccactcct caacaaagagcaagaaatattaggctttcagaacagttacatgtttgtga gatatttccagtctgtttgggg
quality values	Open. Hide. 58 31 33 31 62 38 20 42 52 56 40 31 56 41 42 62 62 62 62 62 62 47 44 62 62 62 62 59 59 43 39 46 27 50 45 45 33 56 56 46 44 59 59 59 59 62 59 59 59 56 59 59 59 59 59 59 51 59 59 59 62 62 59 59 59 62 59 59 59 62 62 62 59 62 59 62 62 59 56 59 56 59 51 59 59 59 56 56 62 62 62 62 62 62 59 59 51 59 49 56 62 59 56 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 59 59 59 59 59 62 59 51 59 62 62 62 59 59 56 62 62 62 62 56 62 62 59 59 59 59 59 62 62 62 62 59 62 59 62 56 54 59 62 62 62 62 62 62 62 62 62 62 62 56 62 56 59 56 50 59 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 59 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 59 62 62 59 59 59 56 59 51 56 59 62 62 62 62 62 62 62 62 51 59 59 49 59 62 62 62 59 59 51 59 59 59 62 56 56 56 51 62 62 62 62 59 59 59 59 59 59 59 59 59 62 62 59 59 59 59 56 59 59 62 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 51 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 56 50 62 50 51 59 56 49 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 59 56 59 59 51 62 62 62 62 62 59 51 56 59 59 62 59 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 56 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 56 62 62 62 62 62 62 56 62 62 56 62 62 62 62 56 62 51 56 62 62 62 62 62 47 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 62 62 56 54 51 62 62 62 62 62 62 62 62 56 62 47 47 62 56 62 62 62 54 42 56 56 62 50 56 62 62 56 62 62 56 62 56 62 47 56 62 46 54 62 47 52 43 62 62 48 62 52 47 39 52 62 33 62 62 62 54 52 62 54 52 52 49 43 38 52 62 62 52 62 62 52 52 54 39 32 52 50 47 41 54 54 48 52 58 54 54 42 52 43 52 54 54 52 41 41 54 52 52 54 41 42 54 54 54 58 52 54 41 34 37 48 33 42 52 48 50 52 52 52 27 52 30 44 52 42 48 40 43 52 52 31 15 22 52 52 33 40 52 54 42 35 41 29 30 52 54 42 42 35 50 52 50 47 41 29 52 54 54 49 11 51 58 47 47 48 32 29 48 47 33 49 54 54 51 32 32 41 25 50 46 39 50 50 36 40 49 50 31 51 30 36 52 37 49 49 39 21 40 50 20 20 39 52 39 27 51 39 53 20 58 51 31 17 37 49 24 37 23 41 38 28 21 36 13 40 39 31 28 39 32 25 16 39 44 33 27 51 36 28 39 39 25 16 30 40 23 50 29 27 44 33 16 32 37 24 36 39 31 29 30 12 44 44 43 50 37 23 29 30 34 35 32 14 52 41 41 39 18 41 32 26 30 39 31 35 36 16 23 37 33 32 38 31 9 12 10 19 14 50 13 13 6 6 10 14 32 32 27 13 37 45 25 14 9 28 19 42 13 33 47 47 30 45 24 33 27 42 9 49 32 33 54 21 32 25 9 7 17 35 23 33 17 8 52 24 21 31 19 32 28 35 33 18 40 53 25 31 32 31 32 32 39 22 19 25 31 18 53 23 31 9 52 22 28 29 40 14 18 34 33 41 18 19 29 30 30 34 31 20 9 8 33 12 8 12 31 29 17 16 40 23 12 33 27 28 28 41 40 31 35 9 25 37 27 36 21 12 23 32 15 22 21 41 25 31 38 21 28 24 31 15 38 12 13 15 29 11 30 25 31 42 29 9 36 25 23 31 38 42 46 46 19 37 32 9 7 31 31 32 17 10 9 7 17 34 10 32 27 25 37 31 15 16 26 21 13 31 18 31 31 24 33 38 24 19 31 41 23 6 10 6 14 14 16 12 31 17 10 6 25 26 26 18 25 10 26 7 5 4 5 18 27 31 21 6 11 20 16 21 28 15 24 18 14 13 9 14 9 11 20 12 7 8 15 10 13 7 19 7 19 7 4 7 13 6 15 15 18 31 29 37 10 23 15 36 15 31 30 8 22 19 23 9 15 15 30 26 6 30 32 24 8 6 4 9 4 13 21 10 7 19 22 18 13 10 15 8 14 14 13 10 8 20 9 5 3 5 12 6 4 5 3 21 7 8 17 20 18 27 6 8 25 10 11 5 12 10 11 9 9 9 10 7 17 7 3 3	Open. Hide. 43 51 27 31 31 37 28 28 34 51 43 45 62 56 50 62 49 59 59 59 59 62 59 59 59 62 59 59 59 59 59 51 59 59 59 56 59 59 59 59 43 59 59 54 54 54 62 62 62 62 56 54 54 46 59 59 62 62 49 59 59 62 59 59 62 62 62 59 62 59 59 59 59 59 62 51 59 59 62 59 59 56 62 62 62 62 59 59 59 62 62 59 62 62 59 62 62 59 59 59 59 59 62 59 59 62 59 62 62 62 62 62 62 59 59 49 54 54 56 59 59 54 59 49 59 59 62 62 59 46 43 59 51 38 32 37 56 59 59 62 62 59 59 56 62 62 62 62 59 56 62 59 59 62 62 62 62 62 59 54 34 62 62 62 59 59 50 62 51 59 56 56 51 59 62 62 62 51 62 62 62 62 62 59 62 59 59 59 62 59 59 59 56 62 62 62 59 62 59 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 62 59 59 51 59 48 62 50 59 59 59 59 59 56 50 56 59 59 59 62 62 59 62 59 59 59 62 59 59 62 59 62 59 59 40 62 59 54 54 62 59 62 59 62 62 62 62 62 62 62 62 59 59 56 62 62 62 62 62 62 59 59 49 62 59 59 62 62 62 62 54 56 62 62 59 59 59 59 62 56 62 59 62 62 62 62 59 59 46 46 46 59 62 62 56 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 59 59 62 62 59 59 59 59 59 62 59 59 62 59 62 62 59 59 62 59 56 62 62 62 62 62 62 62 62 59 56 62 62 59 59 62 56 56 56 56 56 56 56 62 56 56 56 56 56 56 56 62 62 62 56 62 62 62 62 62 54 54 56 51 51 56 56 56 62 56 56 56 56 56 56 56 56 56 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 56 62 51 47 56 56 42 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 56 62 56 62 56 56 62 62 56 62 62 62 62 62 52 62 48 62 54 54 62 48 52 45 52 52 52 62 62 62 62 52 52 52 52 52 50 62 62 54 62 62 52 54 58 58 58 42 58 58 58 58 58 52 54 54 58 58 46 47 58 50 49 52 52 47 52 58 54 54 58 54 44 54 58 58 54 54 47 45 52 54 54 54 58 54 42 58 54 58 54 54 54 46 40 46 35 37 46 48 41 38 54 50 53 54 49 45 30 54 42 54 46 54 50 54 52 48 48 49 49 51 51 41 48 53 41 50 48 50 34 33 50 41 41 42 50 37 58 58 48 38 51 58 58 51 40 52 46 49 34 47 40 49 46 50 50 50 58 39 47 48 50 50 54 50 40 51 50 50 42 48 31 41 40 42 51 38 46 51 37 31 58 50 41 53 40 50 50 50 51 42 50 33 41 39 53 51 50 30 54 32 52 51 26 42 50 34 33 39 35 41 53 51 54 51 50 50 52 39 39 39 37 35 53 58 54 51 16 29 40 53 45 54 49 52 31 50 40 33 22 25 41 28 53 53 39 41 34 32 32 33 35 26 52 53 39 29 40 24 39 33 37 39 19 24 42 39 37 38 31 33 29 33 49 36 26 21 13 29 39 32 42 51 31 28 41 53 21 54 16 32 29 32 31 30 32 33 46 34 28 40 40 43 33 45 53 31 35 33 46 31 51 34 33 35 52 30 21 36 27 19 32 31 28 53 32 31 18 15 33 31 40 32 27 30 27 36 26 22 24 30 31 31 31 13 40 29 29 31 30 29 36 33 27 48 15 18 20 31 31 46 40 22 27 20 10 31 31 31 31 46 19 31 34 31 34 31 29 16 33 22 26 21 31 29 23 36 26 36 26 32 28 36 46 31 30 27 31 21 31 31 20 24 30 41 29 24 27 23 26 11 11 9 20 26 14 8 23 19 9 24 13 31 7 23 11 29 19 25 21 31 38 17 14 21 41 22 22 20 13 28 34 32 18 44 21 18 10 24 22 23 14 16 22 15 20 28 28 28 14 33 14 14 33 28 14 19 12 29 30 25 13 7 9 32 14 22 32 23 9 30 8 31 6 33 48 13 11 9 10 15 19 16 32 33 26 5 7 17 15 10 17 11 22 26 11 21 27 32 8 4 18 8 15 11 8 9 9 29 19 7 13 10 23 21 26 38 27 21 12 8 10 23 28 34 15 7 10 19 20 13 21 7 21 17 8 10 27 16 10 7 11 6 11 6 12 17 33 9 10 7 7 14 5 13 10 18 19 33 13 19 15 6 14 8 19 11 7 15 11 10 15 5 12 10 14 17 10 3 4 11 9 4 4 4 5 11 15 9 7 6 22 7 17 6 4 8 5 26 13 10 27 25 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_7206180_7207284
seq2: B6Ng01-216L19.b_50_1163 (reverse)

seq1  CAAAACTCAAAGAAGCCT-CCAGAAACTCATCA-GTTGAATATTAATGCA  48
      |||| ||||||||||| | |||||||| ||||| |||||||||| |||| 
seq2  CAAATCTCAAAGAAGCTTCCCAGAAAC-CATCAGGTTGAATATT-ATGCT  48

seq1  TAAATGAAAAAAAGAGACAGAAGAAAGAAAGC-TACAAGAATTCAGGTGT  97
      ||| ||||||| ||||||   ||||||||||| | |||||||||||||||
seq2  TAATTGAAAAATAGAGACCAGAGAAAGAAAGCTTTCAAGAATTCAGGTGT  98

seq1  TATCAGCGTGAAGCATCATGAGATTACTGTAGAAT-GCACATTTCTTGAC  146
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATCAGCGTGAAGCATCATGAGATTACTGTAGAATGGCACATTTCTTGAC  148

seq1  TACATCATGGG-AAGGT-GTCAGCTCAATTTTACTGCGGGAATGGACTTC  194
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  TACATCATGGGAAAGGTGGTCAGCTCAATTTTACTGCGGGAATGGACTTC  198

seq1  ACTGGCTCT-AATGGTG-ACCCCAGTTCTCCAGACTCCCTGCATTACATC  242
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  ACTGGCTCTAAATGGTGAACCCCAGTTCTCCAGACTCCCTGCATTACATC  248

seq1  AGCCCT-AATAGTGTTAATGAGTATTTGAGTGCCATCTGCTC-AGTGGGA  290
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCCCTAAATAGTGTTAATGAGTATTTGAGTGCCATCTGCTCAAGTGGGA  298

seq1  TTGGCAATTCAAGATTATGATGTTG-ATAAAATGTCTCCAGCTTTTGGCT  339
      ||||||||||||||||||||||||| | ||||||||||||||||||||||
seq2  TTGGCAATTCAAGATTATGATGTTGAAAAAAATGTCTCCAGCTTTTGGCT  348

seq1  TTGAAGCTCAGGTGCCCCCTCAGTGGCAGGTGTCTCATGAATTCCCAATG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCTCAGGTGCCCCCTCAGTGGCAGGTGTCTCATGAATTCCCAATG  398

seq1  GACTTTAACCCCTCGAACCCCTATTGCAATGGAATCAAGGCATTATAGAG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTAACCCCTCGAACCCCTATTGCAATGGAATCAAGGCATTATAGAG  448

seq1  GCTTATCAGACCTGTCTTCCTCAGATAAGACTCTGTGGATCAACTAATTT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCAGACCTGTCTTCCTCAGATAAGACTCTGTGGATCAACTAATTT  498

seq1  TTCTCCAATTATAACCACGTGGCCAGGTTTGCAGCTGCAGCCACACAGCA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAATTATAACCACGTGGCCAGGTTTGCAGCTGCAGCCACACAGCA  548

seq1  GCAGACCACTTCTCAATACTTTCTGCTTGTATCCATCACCGATGGCGTGA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCACTTCTCAATACTTTCTGCTTGTATCCATCACCGATGGCGTGA  598

seq1  TCGCAGACCTTGATGAAACCAGACAGGCAATCGTCAATGCAGCCAAGCTG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGACCTTGATGAAACCAGACAGGCAATCGTCAATGCAGCCAAGCTG  648

seq1  CCCATGTCTATCATCATTGTGGGACTTCGGAGAGCTGACTTCAGTGCCAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTCTATCATCATTGTGGGACTTCGGAGAGCTGACTTCAGTGCCAT  698

seq1  GGAGTTTCTAGATGGTGATGGTGGAAGGCTCCGTGCCCCATCAGGTGAGG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCTAGATGGTGATGGTGGAAGGCTCCGTGCCCCATCAGGTGAGG  748

seq1  TGACCATAAGAGATATTGTTCAGTCTGTGCCTTTCAGACAGTTCAGAATG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATAAGAGATATTGTTCAGTCTGTGCCTTTCAGACAGTTCAGAATG  798

seq1  CTCCAAAAGAAACACTTGCTCAGTGTGTCTTGGCAGAAATTCCCTAGCAG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAAGAAACACTTGCTCAGTGTGTCTTGGCAGAAATTCCCTAGCAG  848

seq1  GTGGTGGGCTACTTCAACACATACAAACTCCTTCCTCCCAAAAACCCAGC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGCTACTTCAACACATACAAACTCCTTCCTCCCAAAAACCCAGC  898

seq1  TGTGAAGTAGGAGGAGCCAGGACAGCTACAGGATTTCAAAAGCTGTGTGG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGTAGGAGGAGCCAGGACAGCTACAGGATTTCAAAAGCTGTGTGG  948

seq1  AGCAACGCCATCTCTTACACAGAATGATGTATCTGCCATCTGCGCTTTTT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACGCCATCTCTTACACAGAATGATGTATCTGCCATCTGCGCTTTTT  998

seq1  ACCCCCTGGGTATCTGATGTGAACCCAGCTTTTTGTATATATCCTATCTG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTGGGTATCTGATGTGAACCCAGCTTTTTGTATATATCCTATCTG  1048

seq1  TTTAAAGCATACATTTTATATTTTTTGAAGAGGACAGTAGCAAGTCCAGT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCATACATTTTATATTTTTTGAAGAGGACAGTAGCAAGTCCAGT  1098

seq1  TCTGCTCAATGAATTC  1105
      ||||||||||||||||
seq2  TCTGCTCAATGAATTC  1114

seq1: chr10_6993500_6994573
seq2: B6Ng01-216L19.g_82_1153

seq1  TGTCTTCCTCAGAAGGATCCTGAGTGTTTGCAACAAATTAGAAGGAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCTCAGAAGGATCCTGAGTGTTTGCAACAAATTAGAAGGAACCC  50

seq1  TGAGCTTCATTGAAAGGCTGAAGTGTCTGTTTGCTGTAAAAGCCATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTCATTGAAAGGCTGAAGTGTCTGTTTGCTGTAAAAGCCATCTTT  100

seq1  GGAGACATTCCCCTAGACACAGAGTATTCAGAAAAGAAATGACATTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACATTCCCCTAGACACAGAGTATTCAGAAAAGAAATGACATTTCAG  150

seq1  AGACATTTAAGACCAAGGCCAGGAATCGAATTGTGTTTGTAAGATCAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTAAGACCAAGGCCAGGAATCGAATTGTGTTTGTAAGATCAAGA  200

seq1  CTAATGGCTTGCTTTTACCGAACATCCAAGGTCTTAACAAATTTCTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGCTTGCTTTTACCGAACATCCAAGGTCTTAACAAATTTCTGCAT  250

seq1  GCACATTCGAAAAAACAATGGTCTCTAGGGAACTTAGATAATGAAGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTCGAAAAAACAATGGTCTCTAGGGAACTTAGATAATGAAGACCA  300

seq1  TTAGCAAATGTGATATGGTAATATATGAATATATGAATATATCAATCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAATGTGATATGGTAATATATGAATATATGAATATATCAATCATG  350

seq1  TTTATGTATGGACTATAGATAGGCTATAGCTAGATAGCTGGCCCTTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATGGACTATAGATAGGCTATAGCTAGATAGCTGGCCCTTTTGG  400

seq1  CATAAAGTGATAAGTCAGAAAACCTTGAATAACTACGTTTGTTTTCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTGATAAGTCAGAAAACCTTGAATAACTACGTTTGTTTTCTGGG  450

seq1  AAGTAAGTAGCAGCATCAGCAGAGCATGCCCAGGTTCTATGGAGCACTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGTAGCAGCATCAGCAGAGCATGCCCAGGTTCTATGGAGCACTCG  500

seq1  TCTCATCTGGTCTGGGTGTCTCATGCTCTACTCCTCCACCTGCTGCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTGGTCTGGGTGTCTCATGCTCTACTCCTCCACCTGCTGCTTTG  550

seq1  CCAGTAACTGTGTTCATTAGCACAAGCTGAGTGCTGCAGCAGATGCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAACTGTGTTCATTAGCACAAGCTGAGTGCTGCAGCAGATGCCCAA  600

seq1  AATACATAACAGTTCCACCATGGTGGGCCATCATTCCGTGCTTACCTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATAACAGTTCCACCATGGTGGGCCATCATTCCGTGCTTACCTGTT  650

seq1  AATCCAGAGAAGTCAACAGCCCTTCTCCACTTTTTTATCTGTTCCTGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGAGAAGTCAACAGCCCTTCTCCACTTTTTTATCTGTTCCTGGGA  700

seq1  GCTCTGTGCCATCAAGTCTTCATGCTGAAGTTTAGGTCACTTGAAGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTGCCATCAAGTCTTCATGCTGAAGTTTAGGTCACTTGAAGGTCA  750

seq1  GACTGGGTGCTGAAATCAACTCACCAGGAGACACAAGCCTGGAAGATAGC  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GACTGGGTGCTGAAATC-ACTCACCAGGAGACACAAGCCTGGAAGATAGC  799

seq1  ACAGGATGCATC-TTCATGGGCCAAGCAGAGGATGACAAGTATCTGTTCC  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACAGGATGCATCTTTCATGGGCCAAGCAGAGGATGACAAGTATCTGTTCC  849

seq1  GCCCAATAAGTTGGGCCATTCCTAATGGCAGAGAGACCTGGGACCCAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATAAGTTGGGCCATTCCTAATGGCAGAGAGACCTGGGACCCAGTG  899

seq1  CAGGGAGGCAAGGCAAGCTCAGATCTT-GGGTGAGTGCTTAAGGGTC-TC  947
      ||||||||||||||||||||||||||| |||||||||||||| |||| ||
seq2  CAGGGAGGCAAGGCAAGCTCAGATCTTGGGGTGAGTGCTTAAAGGTCTTC  949

seq1  TACCCTGGGATAAGTTATG-AGATTGA-GCCACACGTTTTGTACCCCACT  995
      |||||| |||| ||||||| ||||||| ||||||||||||||||||||||
seq2  TACCCT-GGAT-AGTTATGAAGATTGAGGCCACACGTTTTGTACCCCACT  997

seq1  CTCAAACAAAGAGGCAAG-AATA-TAGGCTTCAAGACACAGTTACATGTT  1043
      |   |||||||| ||||| |||| |||||||  ||| |||||||||||||
seq2  CCTCAACAAAGA-GCAAGAAATATTAGGCTTTCAGA-ACAGTTACATGTT  1045

seq1  TTGGTGAG-TATTTCCAATTTCTGTTTTGGGG  1074
      |  ||||| ||||||||   ||||||| ||| 
seq2  T--GTGAGATATTTCCA--GTCTGTTTGGGG-  1072

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information