BAC Information

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BAC

Clone NameB6Ng01-216P12
Chromosome10 (Build37)
Map Location 11,866,553 - 11,867,210
singlet/doubletsinglet
Overlap genenone
Upstream geneShprh, Fbxo30, Epm2a, EG666732, LOC100039343
Downstream geneUtrn, LOC665172, Stx11, Sf3b5, Plagl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216P12.bB6Ng01-216P12.g
ACCGA033515GA033516
length916658
definitionB6Ng01-216P12.b B6Ng01-216P12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgtgattgagttacctcactaaggatgatatcctccagata
tatccatttgtccaagaatttcataagttcattgtttttaaaagctgagt
agtactccattgtgtaaatgtacaactttttctgtatccattcctctgtt
gagggacatctgggttctttccagctctggttattataaatgaggctgct
atgaacataggggagcatatgttcatatcaccagttggaacatcttctgg
gtatatgcccaggagaggtattgctggatcttccggtagtactatgtcca
acttactgaggaaacaccagactgacttccagagtggttgtaccagttta
caatcccaccagcaatggagaagtgttcctctttctccacatccttacca
gcatctgctgtcacctgagtttttgttcttagccattctgaatggtgtga
ggtggaatctcagggttgttttaatttgcatttccctgatgattaaggat
gttgaacattttttcaggtgtttctcagccatttggaattcctcagttga
gaactctttgtttagctctgtaccccatttttaatggggttatttgaatt
tctggagtccagcttcttcagctctttgtacatattggatattggtcctc
tatcagatttaggattggtaaaaaatcctttcccaatctgttggtggcct
ttttgtcttattgacaatgtcttttgccttacagaagcttttgcaatttt
atgaggtcccatttgtcaatttcttggtctttacaggacaagccattgct
gttcagttttagggaatttttcccctgtgccccatatctttgagatgttt
ccccactttctcctctactaatttcagtgtctctggttttatatggaggt
cttttgatccaattag

gaattccatgcccatcaacaatgcctgcaacgatgagataatcgtcacta
tgagcgctcagggacaaagaggatgaatcactgagcagagtattgtcact
aataataagcgctgggaataaggcaatgcgtttttcatcattacgctatg
gcatatatcgtgggtttacttgcagagttgcaattgatgaccacataaaa
ctcaagagagttgacagaagtaataaaatgtttgtgagttaatgtattgc
aaaagccttgagaagcagcctttactaattgctctacagtgagtcctgca
tctttggttagtggataactgatgcaatgatgtaatactgccgctagctc
tctgtgcattctgcatctgtactttcaagcattagtggatccaaaatggc
ttaaaggatacaactgtgtatgaaaggaacacataactccctaaacaata
gagtagaatcactcataaatgtttatgttgcagtagaagtaatgcataga
tgacctgaaatatatggaaggatatgtgcgagttacatgcaaatgttatg
ccatttaacataagggatttaaacatctacagatttggttccaactgaaa
caaacgatgagggagatatccattgggtgtaatgagtggggtaagtgatg
agtgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_11866553_11867210
seq2: B6Ng01-216P12.g_67_724 (reverse)

seq1  TCCACACTCATCACTTACCCCACTCATTACACCCAATGGATATCTCCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTCATCACTTACCCCACTCATTACACCCAATGGATATCTCCCTC  50

seq1  ATCGTTTGTTTCAGTTGGAACCAAATCTGTAGATGTTTAAATCCCTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTTGTTTCAGTTGGAACCAAATCTGTAGATGTTTAAATCCCTTATG  100

seq1  TTAAATGGCATAACATTTGCATGTAACTCGCACATATCCTTCCATATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGGCATAACATTTGCATGTAACTCGCACATATCCTTCCATATATT  150

seq1  TCAGGTCATCTATGCATTACTTCTACTGCAACATAAACATTTATGAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCATCTATGCATTACTTCTACTGCAACATAAACATTTATGAGTGA  200

seq1  TTCTACTCTATTGTTTAGGGAGTTATGTGTTCCTTTCATACACAGTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTCTATTGTTTAGGGAGTTATGTGTTCCTTTCATACACAGTTGTA  250

seq1  TCCTTTAAGCCATTTTGGATCCACTAATGCTTGAAAGTACAGATGCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAGCCATTTTGGATCCACTAATGCTTGAAAGTACAGATGCAGAA  300

seq1  TGCACAGAGAGCTAGCGGCAGTATTACATCATTGCATCAGTTATCCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGAGAGCTAGCGGCAGTATTACATCATTGCATCAGTTATCCACTA  350

seq1  ACCAAAGATGCAGGACTCACTGTAGAGCAATTAGTAAAGGCTGCTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGATGCAGGACTCACTGTAGAGCAATTAGTAAAGGCTGCTTCTCA  400

seq1  AGGCTTTTGCAATACATTAACTCACAAACATTTTATTACTTCTGTCAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTGCAATACATTAACTCACAAACATTTTATTACTTCTGTCAACT  450

seq1  CTCTTGAGTTTTATGTGGTCATCAATTGCAACTCTGCAAGTAAACCCACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGTTTTATGTGGTCATCAATTGCAACTCTGCAAGTAAACCCACG  500

seq1  ATATATGCCATAGCGTAATGATGAAAAACGCATTGCCTTATTCCCAGCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCCATAGCGTAATGATGAAAAACGCATTGCCTTATTCCCAGCGC  550

seq1  TTATTATTAGTGACAATACTCTGCTCAGTGATTCATCCTCTTTGTCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAGTGACAATACTCTGCTCAGTGATTCATCCTCTTTGTCCCTG  600

seq1  AGCGCTCATAGTGACGATTATCTCATCGTTGCAGGCATTGTTGATGGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTCATAGTGACGATTATCTCATCGTTGCAGGCATTGTTGATGGGCA  650

seq1  TGGAATTC  658
      ||||||||
seq2  TGGAATTC  658


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