BAC Information

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BAC

Clone NameB6Ng01-217C06
Chromosome10 (Build37)
Map Location 90,841,871 - 90,974,725
singlet/doubletdoublet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217C06.bB6Ng01-217C06.g
ACCGA033632GA033633
length1,1281,108
definitionB6Ng01-217C06.b B6Ng01-217C06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,841,871 - 90,843,008)(90,973,602 - 90,974,725)
sequence
gaattccagtgactcacagtttggttctgaagataacccagtttcctgaa
taactgaggaatgggagatgaagaggcaccattcagagagctatccctgt
gaacccagaaacgtaaataaaggccagagaagtaggaaaagttctttatc
taaagcttcaagtaaaaaaaaaattaaccacttaaaaatataattatact
tcccaggtttctagcatgcaggccgtgctgggatttgtccttgtagaacc
atcttggcttccagactatcattttatttcaatttaactttcccaacaaa
atccgttatcggttccagtgacctgttcattttctgcatgtgcagaattc
aatgaagctgttttaaatattttcttctttattaaacactcctctaaaat
ccataattcaggagacaataaatagttgcatttatttctctacagctcag
ctctgcgaagccgactgtgaagtcagtggggtattctcacgctagccagt
ttttgttatcagctacacaacatgaaagaagattatattttgctgttaat
gggagaaacggagggagaataaagaccctaagtattttaaaacactggtt
tgaattgcggcttgagatccaaatgggaaggatggggcaagttctgcgtg
gatctgtcacttaacttattgaggacaaaaggattctgtttcctttttat
attaaatgaaattacccattctgcttgtgtactgaacccaaacatcttaa
aaaccattctattcttcatccaactgtggtcttccatctccccatctccc
aggttttgagtgtgcaggacacaaaaggtgaataattttcagccatttcc
aggatacgaacgtcttttgtttcaacaaagactttctcaggataaaagga
gattttctacctcagaaagggccttgcgtttgcagccctcttcacataag
tcctccagacatttgtttcaaagatgcaactgggcttctgaggcagagct
tcctcacagacacataggatttttgatagcatatgaaaattcttttgaca
tcttttagtttgtaaatgaatttgctagcacagggcagcaacatatatct
agggtggaccttatttccagcctttatt
gaattcaaaagcaaagcactagaaaacactgcacacctgcagctaaaagg
aaccgggacaagctgtagactaggggcaaggtggatagtcctatactgaa
tatagaaaggtcaacatttggagcatcactccatgcaaaaggcaagagat
ggcaaaacctattaccatatttaaaacacacacacaacttctgttaaagt
tttaaagatatagaactcggtccagagggaggtgtggctaaaagagcagg
tttgaataagcccatagcagaaaggtgtttgtttctcttaggaggactat
ggaggggcagaacgggatacaaggaacaatctattcaaagccagctttac
aatagttcatctaaccaggactggatatggtagcacaactctcttatacc
agtatttgcaaggtggagacaggaggattataagctcaagatcatcttca
gctacatagaaagcccagaatcagcctgggctatatgagacatgtctaaa
agaaaaaaagtcttaattagtctagaaataacttgaatgaaaaataagag
ccaacgagataaccactagggagtctggctaaattttaagcaaaagttgt
tttgaagaaaggaaggaggacaggagggtacacatgctagtgatatgaga
ataataaacaaacacacagtagacactctcgagcctagctgtaggtttca
atcccaggaggcagagacgggtgtatcgcaagcactcgctagctgctcag
aatgaccaacacattaagttccaggttcagtgaaagactctgcctcaaaa
ctaagatgaagataaatagaagaagacatctgacgtagacctctggcctc
tcctcgaacattcacatgtgagtgaacacacacacacacacacacacata
tgaatgtgcaagtatacagacatacataaattctaggtccccacctagac
atattaaatcagaatttcaacggcagactagaccagtgtatgtttgaaag
ttctcagtgattctatcttcagatgtctgtgactttctttctgtctccca
gtactgtcaaagatgtctatcttgatcgatgaacatgactttcagagtac
cctgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90841871_90843008
seq2: B6Ng01-217C06.b_46_1173

seq1  GAATTCCAGTGACTCACAGTTTGGTTCTGAAGATAACCCAGTTTCCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGACTCACAGTTTGGTTCTGAAGATAACCCAGTTTCCTGAA  50

seq1  TAACTGAGGAATGGGAGATGAAGAGGCACCATTCAGAGAGCTATCCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGGAATGGGAGATGAAGAGGCACCATTCAGAGAGCTATCCCTGT  100

seq1  GAACCCAGAAACGTAAATAAAGGCCAGAGAAGTAGGAAAAGTTCTTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGAAACGTAAATAAAGGCCAGAGAAGTAGGAAAAGTTCTTTATC  150

seq1  TAAAGCTTCAAGTAAAAAAAAAATTAACCACTTAAAAATATAATTATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTCAAGTAAAAAAAAAATTAACCACTTAAAAATATAATTATACT  200

seq1  TCCCAGGTTTCTAGCATGCAGGCCGTGCTGGGATTTGTCCTTGTAGAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGTTTCTAGCATGCAGGCCGTGCTGGGATTTGTCCTTGTAGAACC  250

seq1  ATCTTGGCTTCCAGACTATCATTTTATTTCAATTTAACTTTCCCAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGCTTCCAGACTATCATTTTATTTCAATTTAACTTTCCCAACAAA  300

seq1  ATCCGTTATCGGTTCCAGTGACCTGTTCATTTTCTGCATGTGCAGAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTTATCGGTTCCAGTGACCTGTTCATTTTCTGCATGTGCAGAATTC  350

seq1  AATGAAGCTGTTTTAAATATTTTCTTCTTTATTAAACACTCCTCTAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCTGTTTTAAATATTTTCTTCTTTATTAAACACTCCTCTAAAAT  400

seq1  CCATAATTCAGGAGACAATAAATAGTTGCATTTATTTCTCTACAGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTCAGGAGACAATAAATAGTTGCATTTATTTCTCTACAGCTCAG  450

seq1  CTCTGCGAAGCCGACTGTGAAGTCAGTGGGGTATTCTCACGCTAGCCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGAAGCCGACTGTGAAGTCAGTGGGGTATTCTCACGCTAGCCAGT  500

seq1  TTTTGTTATCAGCTACACAACATGAAAGAAGATTATATTTTGCTGTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTATCAGCTACACAACATGAAAGAAGATTATATTTTGCTGTTAAT  550

seq1  GGGAGAAACGGAGGGAGAATAAAGACCCTAAGTATTTTAAAACACTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAACGGAGGGAGAATAAAGACCCTAAGTATTTTAAAACACTGGTT  600

seq1  TGAATTGCGGCTTGAGATCCAAATGGGAAGGATGGGGCAAGTTCTGCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGCGGCTTGAGATCCAAATGGGAAGGATGGGGCAAGTTCTGCGTG  650

seq1  GATCTGTCACTTAACTTATTGAGGACAAAAGGATTCTGTTTCCTTTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTCACTTAACTTATTGAGGACAAAAGGATTCTGTTTCCTTTTTAT  700

seq1  ATTAAATGAAATTACCCATTCTGCTTGTGTACTGAACCCAAACATCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGAAATTACCCATTCTGCTTGTGTACTGAACCCAAACATCTTAA  750

seq1  AAACCATTCTATTCTTCATCCAACTGTGGTCTTCCATCTCCCCATCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATTCTATTCTTCATCCAACTGTGGTCTTCCATCTCCCCATCTCCC  800

seq1  AGGTTTTGAGTGTGCAGGACACAAAAGGTGAATAATTTTCAGCCATTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGAGTGTGCAGGACACAAAAGGTGAATAATTTTCAGCCATTTCC  850

seq1  AGGATACGAACGTCTTTTGTTTCAACAAAGACTTTCTCAGGATAAAAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACGAACGTCTTTTGTTTCAACAAAGACTTTCTCAGGATAAAAGGA  900

seq1  GATTTTCTACCTCAG-AAGGGCCTTGCGTTTGCAGCCCTCTTCACATAAG  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GATTTTCTACCTCAGAAAGGGCCTTGCGTTTGCAGCCCTCTTCACATAAG  950

seq1  TCCTCCAAGACATTTGTTTCAAAAGATGCAACTGGGC-TCTGAGGCAGAG  998
      |||||| ||||||||||||| |||||||||||||||| ||||||||||||
seq2  TCCTCC-AGACATTTGTTTC-AAAGATGCAACTGGGCTTCTGAGGCAGAG  998

seq1  CTTCCTCACAGACACAATAGGATTTTTGATAGCATTATGAAAAATTCTTT  1048
      ||||||||||||||| |||||||||||||||||| |||| ||||||||||
seq2  CTTCCTCACAGACAC-ATAGGATTTTTGATAGCA-TATG-AAAATTCTTT  1045

seq1  TGACATTCTTTTAGTTTGTAAATGAATTTTGCTAGCACAGGGCAGGGAAC  1098
      ||||| |||||||||||||||||||| ||||||||||||||||| | |||
seq2  TGACA-TCTTTTAGTTTGTAAATGAA-TTTGCTAGCACAGGGCA-GCAAC  1092

seq1  ATATATCTTAGGGGTGACTTTATTTCAAGCCCTTTTTATT  1138
      ||||||| |||||  ||| ||||||| ||||   ||||||
seq2  ATATATC-TAGGGTGGACCTTATTTCCAGCC---TTTATT  1128

seq1: chr10_90973602_90974725
seq2: B6Ng01-217C06.g_65_1172 (reverse)

seq1  TGAGCAGGGTACTCTGAAAGTCATTGTTTCATCTGATTCCAGGAATAGAC  50
      ||||||||||||||||||||||||   |||||| |||  || | ||||||
seq2  TGAGCAGGGTACTCTGAAAGTCAT--GTTCATC-GAT--CAAG-ATAGAC  44

seq1  ATCCTTTGACCAGTACTGGGAAGACAG--AGAGAGTCACAGAACCATCTG  98
      || |||||| |||||||||| ||||||  ||| |||||||||  ||||||
seq2  AT-CTTTGA-CAGTACTGGG-AGACAGAAAGAAAGTCACAGA--CATCTG  89

seq1  AAGATTAGAATCACCTGAGGAACTTTTCAAACATACACTGGTCTAGGTCT  148
      |||| |||||||| |||| |||| ||||||||||||||||||||| ||| 
seq2  AAGA-TAGAATCA-CTGA-GAAC-TTTCAAACATACACTGGTCTA-GTC-  133

seq1  TGCCGTTGAAATTCTGATTTAATATGTCTAGGTGGGGACCTAGAATTTAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGTTGAAATTCTGATTTAATATGTCTAGGTGGGGACCTAGAATTTAT  183

seq1  GTATGTCTGTATACTTGCACATTCATATGTGTGTGTGTGTGTGTGTGTGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCTGTATACTTGCACATTCATATGTGTGTGTGTGTGTGTGTGTGT  233

seq1  TCACTCACATGTGAATGTTCGAGGAGAGGCCAGAGGTCTACGTCAGATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACATGTGAATGTTCGAGGAGAGGCCAGAGGTCTACGTCAGATGT  283

seq1  CTTCTTCTATTTATCTTCATCTTAGTTTTTGAGGCAGAGTCTTTCACTGA  348
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTTCTTCTATTTATCTTCATCTTAG-TTTTGAGGCAGAGTCTTTCACTGA  332

seq1  ACCTGGAACTTAATGTGTTGGTCATTCTGAGCAGCTAGCGAGTGCTTGCG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAACTTAATGTGTTGGTCATTCTGAGCAGCTAGCGAGTGCTTGCG  382

seq1  ATACACCCGTCTCTGCCTCCTGGGATTGAAACCTACAGCTAGGCTCGAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCCGTCTCTGCCTCCTGGGATTGAAACCTACAGCTAGGCTCGAGA  432

seq1  GTGTCTACTGTGTGTTTGTTTATTATTCTCATATCACTAGCATGTGTACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTACTGTGTGTTTGTTTATTATTCTCATATCACTAGCATGTGTACC  482

seq1  CTCCTGTCCTCCTTCCTTTCTTCAAAACAACTTTTGCTTAAAATTTAGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCCTCCTTCCTTTCTTCAAAACAACTTTTGCTTAAAATTTAGCC  532

seq1  AGACTCCCTAGTGGTTATCTCGTTGGCTCTTATTTTTCATTCAAGTTATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCCTAGTGGTTATCTCGTTGGCTCTTATTTTTCATTCAAGTTATT  582

seq1  TCTAGACTAATTAAGACTTTTTTTCTTTTAGACATGTCTCATATAGCCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACTAATTAAGACTTTTTTTCTTTTAGACATGTCTCATATAGCCCA  632

seq1  GGCTGATTCTGGGCTTTCTATGTAGCTGAAGATGATCTTGAGCTTATAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATTCTGGGCTTTCTATGTAGCTGAAGATGATCTTGAGCTTATAAT  682

seq1  CCTCCTGTCTCCACCTTGCAAATACTGGTATAAGAGAGTTGTGCTACCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGTCTCCACCTTGCAAATACTGGTATAAGAGAGTTGTGCTACCAT  732

seq1  ATCCAGTCCTGGTTAGATGAACTATTGTAAAGCTGGCTTTGAATAGATTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTCCTGGTTAGATGAACTATTGTAAAGCTGGCTTTGAATAGATTG  782

seq1  TTCCTTGTATCCCGTTCTGCCCCTCCATAGTCCTCCTAAGAGAAACAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTATCCCGTTCTGCCCCTCCATAGTCCTCCTAAGAGAAACAAAC  832

seq1  ACCTTTCTGCTATGGGCTTATTCAAACCTGCTCTTTTAGCCACACCTCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCTGCTATGGGCTTATTCAAACCTGCTCTTTTAGCCACACCTCCC  882

seq1  TCTGGACCGAGTTCTATATCTTTAAAACTTTAACAGAAGTTGTGTGTGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACCGAGTTCTATATCTTTAAAACTTTAACAGAAGTTGTGTGTGTG  932

seq1  TTTTAAATATGGTAATAGGTTTTGCCATCTCTTGCCTTTTGCATGGAGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATATGGTAATAGGTTTTGCCATCTCTTGCCTTTTGCATGGAGTG  982

seq1  ATGCTCCAAATGTTGACCTTTCTATATTCAGTATAGGACTATCCACCTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCAAATGTTGACCTTTCTATATTCAGTATAGGACTATCCACCTTG  1032

seq1  CCCCTAGTCTACAGCTTGTCCCGGTTCCTTTTAGCTGCAGGTGTGCAGTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGTCTACAGCTTGTCCCGGTTCCTTTTAGCTGCAGGTGTGCAGTG  1082

seq1  TTTTCTAGTGCTTTGCTTTTGAATTC  1124
      ||||||||||||||||||||||||||
seq2  TTTTCTAGTGCTTTGCTTTTGAATTC  1108