BAC Information

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BAC

Clone NameB6Ng01-217K05
Chromosome10 (Build37)
Map Location 31,196,774 - 31,197,600
singlet/doubletsinglet
Overlap genenone
Upstream geneTrmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294
Downstream geneIbrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217K05.bB6Ng01-217K05.g
ACCGA033989GA033990
length828935
definitionB6Ng01-217K05.b B6Ng01-217K05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaatctttagtatttcatctgtataggagatatcgataggaa
taatgttcttaaagggctctcagcaaatatataagagatgcttgatgctg
cttcttttttttttcttttttttttaactaggtattttcctcatttacat
ttccagtgctatcccaaaagtcccccatacccacccccccaatcccctac
ccacccactccccctttttggccctggcgttcccctgtactggagcatat
aaagtttgcaagtccaaagggcctctctttccagtgatggccgactaggc
catcttttgatacatatgcagctagagacaagagctccgggctactggtt
agttcatattgttgttccacttatagggttgcagatccctttagctcctt
gggtactttctctagctcctccattgggggccgtgtgacccatccaatag
ctgactgtgatcatccacttctgtgttttgatgctgcttcttaacaacat
ggccattgcataaaacagggtgtgaggtgtccccagaggaaccttatttt
ttctagtgaccataagagttcaaatcccacctttttatttttatcaacat
tgttaggccaaccctgagctaaatgcaaagtaacagaagatgagaacaat
ttgatccatcattaaacaacaatgcttctttatttcaccaaacagcctcc
acagccatgtgatagatatttaataaatagtcaccagggagcaaatatga
ggattccggctgcctcctgtgctcacaggaaacttttacagtgtcgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctccatccactatatgctataatttgtaaggtcttgttcaagcac
acatattgctgaaaattcctgggggcagctaccctgccatatacaagaga
cacaatctcataccccatcctctggctctcacaatctttccatacctctt
ctttaatgttccctgagtctttggtgtaggagtttgatatgccatagcca
gttgtcttctgcatttttacctttctgtagttgtctccatctgctacaaa
aaagatttttttttttggaggaggtgagtgagagctacacttacctatgg
gtataaggataaatatttagaacataaaaattatagtgatttagtaaagt
ggcagttaaaaaagatatatagagaggtatatagacagaaagaaagatag
atgatagatagagaaatgacaaacatagatagatgatagagagatggtaa
tagagtatacttatatatttagttaggtctaattaaaaacttttgttact
tcttttatcttttgaggttataattaccattcttctcttccctttcctcc
ctccaaatgttctgatatacccctcctcgttctctttcaactccatgacc
gctttttttaattgttgttatttgtatatacttatgtatgtaaagataag
taaaacataaagcaatgtgactccatatggctttttcaaacaccctgagt
gttgttggaccccaacccccattgttaccctccctcctctctatcctggt
atggtatccttccaccaccactgtactggctaattttgtgtcaacttgac
acagctggagttattcacaatgaaaggagctttcagtttggagaaatgcc
ttcatgagatccacctaaaaagcatttttctctcaattagtgatcaaggg
gggagggtccccttgtggggtgatgccatatctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31196774_31197600
seq2: B6Ng01-217K05.b_48_875

seq1  GAATTCACAAATCTTTAGTATTTCATCTGTATAGGAGATATCGATAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAATCTTTAGTATTTCATCTGTATAGGAGATATCGATAGGAA  50

seq1  TAATGTTCTTAAAGGGCTCTCAGCAAATATATAAGAGATGCTTGATGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCTTAAAGGGCTCTCAGCAAATATATAAGAGATGCTTGATGCTG  100

seq1  CTTCTTTTTTTTTTCTTTTTTTTTTAACTAGGTATTTTCCTCATTTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTTTTTTCTTTTTTTTTTAACTAGGTATTTTCCTCATTTACAT  150

seq1  TTCCAGTGCTATCCCAAAAGTCCCCCATACCCACCCCCCCAATCCCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGCTATCCCAAAAGTCCCCCATACCCACCCCCCCAATCCCCTAC  200

seq1  CCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGAGCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGAGCATAT  250

seq1  AAAGTTTGCAAGTCCAAAGGGCCTCTCTTTCCAGTGATGGCCGACTAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGCAAGTCCAAAGGGCCTCTCTTTCCAGTGATGGCCGACTAGGC  300

seq1  CATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGCTACTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGCTACTGGTT  350

seq1  AGTTCATATTGTTGTTCCACTTATAGGGTTGCAGATCCCTTTAGCTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATATTGTTGTTCCACTTATAGGGTTGCAGATCCCTTTAGCTCCTT  400

seq1  GGGTACTTTCTCTAGCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTTTCTCTAGCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAG  450

seq1  CTGACTGTGATCATCCACTTCTGTGTTTTGATGCTGCTTCTTAACAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGTGATCATCCACTTCTGTGTTTTGATGCTGCTTCTTAACAACAT  500

seq1  GGCCATTGCATAAAACAGGGTGTGAGGTGTCCCCAGAGGAACCTTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTGCATAAAACAGGGTGTGAGGTGTCCCCAGAGGAACCTTATTTT  550

seq1  TTCTAGTGACCATAAGAGTTCAAATCCCACCTTTTTATTTTTATCAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGACCATAAGAGTTCAAATCCCACCTTTTTATTTTTATCAACAT  600

seq1  TGTTAGGCCAACCCTGAGCTAAATGCAAAGTAACAGAAGATGAGAACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGCCAACCCTGAGCTAAATGCAAAGTAACAGAAGATGAGAACAAT  650

seq1  TTGATCCATCATTAAACAACAATGCTTCTTTATTTCACCAAACAGCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCATCATTAAACAACAATGCTTCTTTATTTCACCAAACAGCCTCC  700

seq1  ACAGCCATGTGATAGATATTTAATAAATAGTCACCAGGGAGCAAATATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCATGTGATAGATATTTAATAAATAGTCACCAGGGAGCAAATATGA  750

seq1  GGATTCCGGCTGCCTCCTGTGCTCACAGGAAAC-TTTACAGTGTCGTGTG  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGATTCCGGCTGCCTCCTGTGCTCACAGGAAACTTTTACAGTGTCGTGTG  800

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTG  827
      ||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTG  828