BAC Information

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BAC

Clone NameB6Ng01-218P15
Chromosome10 (Build37)
Map Location 35,374,226 - 35,508,933
singlet/doubletdoublet
Overlap geneLOC100041585
Upstream geneLOC667824
Downstream geneLOC667860, Hs3st5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218P15.bB6Ng01-218P15.g
ACCGA034953GA034954
length1,0781,072
definitionB6Ng01-218P15.b B6Ng01-218P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,507,857 - 35,508,933)(35,374,226 - 35,375,302)
sequence
gaattctgctttgttggcactaagttgttcaacaacaaaaagtcaccaag
gaattgtatttaaatacaattttagccactgtctagagaatttttaccta
ctgtgtatataaaaacaattttaatttgagggttctttttttaatatagt
cttgaatacattctgactgtgctgttctaatatcaccttctctgtaatac
agaacctgtacaactcatgacaatccttctacctttggctagttttaata
ttttcaatcatatactttagataaattaaccagttattttctgttttttg
gggtttttctgcccaaatgaagaagagatttatctgcagtatattggatt
attggtagattataattacacactcagaattatactttcagctgaaactt
tataagaattattccaaagtcaatttttattatcatcataaatatacatg
tgtttgcctcctgagatgaagaaagatatagggtaatttaaaagactcta
gtttattatttctcttatgggagtggaatatataataagagaattgcctc
gacgtttgagggaattaaatatcttaaacaggcaattatttttaagtaat
gagggttaaaattctgtagcagatgaagtttccagatggcatgtaaaaca
aaaagccaaaggtaggcaggtccaaattatgtctttgaagttattgtatg
gaaacagagttgcaggaaaatggccatgtcatcaatgctgttaaacaaaa
tgtgtgtgggctcatgtggctcataagctaaccaaaaaaaaaaaaaaaaa
aaaaaatctaagaagaatagttgcaaacatctgatgatgaaatattagac
tataactacaaataatgttggaagggtttaaatttgcatatcagattgac
agatcataaataagaactaataacacaggcttcagatagtatagttttct
cctcttatgtactattcaaggccagaataaagattaaagggaaccataga
atcctaccgtttaattgttatagatggacagataacttaaatctagcata
taaggagtacctatatcattcatttgct

gaattcagcagatggaaacttggtaaaaagtcaactgtaagtcagatgga
gtagatttcaccgaaggccacactatttatggactgaatgttcatttcaa
gggtgtttgtgaggacttaagagaatatcttgtaaatttccaagtgacaa
tgatgcatcacctctgactctgctatacctgtgtttgtttggttttccag
ctcatctgcaagggactttctccagtgtgtgcagtgcctctgttattttc
atcacttcctggggatgtttcctttgtgcttcaagtgtgatccactacca
tgctatatgctctgtttattgcaaagctaaacaaagcatgcctaggagca
tctgaaaacaattaaaaagtaattgaaatgagctctggtctctactaaac
tcattaaggtttttatttcatcctccacactttggggagattcaaatctg
acccttctatcccactggccccctgctggcttgagagatcccttgccaga
ggcagaaaaaggaccatcagattctgtacagagagtgttctccaaatgac
caggcagggaaaagtcctgatggctgccaagaggcttcagtgggagggag
gcatctctctgctttctgcctttgagcagctgctctatgaattaataaac
atcactgtggatacacacacattcttattaagaattcacaagcacattaa
tcaggccactctcatgcaactcaggaaattaaagttagcttttctcttgc
attttttttcctggggaaaagtcagagacaacattagaatgagaaagaaa
gaaaggaagaaagaaaaaacttgctgaaaggacagaaacaaggaaatgga
cagatttcgacacttcaacaaagaaagtttgaaatcagtccaagtaagac
aatatttacaatgttctcagggtttaaatcaaaataacatagtaccttaa
atatattaaaaatgtacagcaaccccgttgatgatgcattatgtcaaaat
atcaggcatattttttatatgactatacaataagtattacggagactcac
ttccctgccatgaatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35507857_35508933
seq2: B6Ng01-218P15.b_48_1125 (reverse)

seq1  AGCAAAATTGAATTGATATAGGTACT-CTTATATGCTAGATTTAAGTTAT  49
      ||||||  |||| ||||||||||||| |||||||||||||||||||||||
seq2  AGCAAA--TGAA-TGATATAGGTACTCCTTATATGCTAGATTTAAGTTAT  47

seq1  CTGTCCATCTATAACAA-TAAACGGTAGGATTCTATGG-TCCCTTTAATC  97
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  CTGTCCATCTATAACAATTAAACGGTAGGATTCTATGGTTCCCTTTAATC  97

seq1  TTTA-TCTGGCCTTGAAATAGTACATAAGAGGAG-AAACTATACTATCTG  145
      |||| |||||||||| |||||||||||||||||| |||||||||||||||
seq2  TTTATTCTGGCCTTG-AATAGTACATAAGAGGAGAAAACTATACTATCTG  146

seq1  AAG-CTGTGTTATTAGTTCTTATTTATGATCTGTCAATCTGATATGCAAA  194
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGTGTTATTAGTTCTTATTTATGATCTGTCAATCTGATATGCAAA  196

seq1  TTTAAACCTTTCC-ACATTATTTGTAGTTATAGTCTAATATTTCATCATC  243
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  TTTAAACCCTTCCAACATTATTTGTAGTTATAGTCTAATATTTCATCATC  246

seq1  AGATGTTTGCAACTATTCTTCTTAGATTTTTTTTTTTTTTTTTTTTTTTT  293
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  AGATGTTTGCAACTATTCTTCTTAGA--TTTTTTTTTTTTTTTTTTTTTT  294

seq1  TGGTTAGCTTATGAGCCACATGAGCCCACACACATTTTGTTTAACAGCAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGCTTATGAGCCACATGAGCCCACACACATTTTGTTTAACAGCAT  344

seq1  TGATGACATGGCCATTTTCCTGCAACTCTGTTTCCATACAATAACTTCAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACATGGCCATTTTCCTGCAACTCTGTTTCCATACAATAACTTCAA  394

seq1  AGACATAATTTGGACCTGCCTACCTTTGGCTTTTTGTTTTACATGCCATC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAATTTGGACCTGCCTACCTTTGGCTTTTTGTTTTACATGCCATC  444

seq1  TGGAAACTTCATCTGCTACAGAATTTTAACCCTCATTACTTAAAAATAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTTCATCTGCTACAGAATTTTAACCCTCATTACTTAAAAATAAT  494

seq1  TGCCTGTTTAAGATATTTAATTCCCTCAAACGTCGAGGCAATTCTCTTAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTTAAGATATTTAATTCCCTCAAACGTCGAGGCAATTCTCTTAT  544

seq1  TATATATTCCACTCCCATAAGAGAAATAATAAACTAGAGTCTTTTAAATT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTCCACTCCCATAAGAGAAATAATAAACTAGAGTCTTTTAAATT  594

seq1  ACCCTATATCTTTCTTCATCTCAGGAGGCAAACACATGTATATTTATGAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATATCTTTCTTCATCTCAGGAGGCAAACACATGTATATTTATGAT  644

seq1  GATAATAAAAATTGACTTTGGAATAATTCTTATAAAGTTTCAGCTGAAAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAAAAATTGACTTTGGAATAATTCTTATAAAGTTTCAGCTGAAAG  694

seq1  TATAATTCTGAGTGTGTAATTATAATCTACCAATAATCCAATATACTGCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCTGAGTGTGTAATTATAATCTACCAATAATCCAATATACTGCA  744

seq1  GATAAATCTCTTCTTCATTTGGGCAGAAAAACCCCAAAAAACAGAAAATA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCTCTTCTTCATTTGGGCAGAAAAACCCCAAAAAACAGAAAATA  794

seq1  ACTGGTTAATTTATCTAAAGTATATGATTGAAAATATTAAAACTAGCCAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAATTTATCTAAAGTATATGATTGAAAATATTAAAACTAGCCAA  844

seq1  AGGTAGAAGGATTGTCATGAGTTGTACAGGTTCTGTATTACAGAGAAGGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAAGGATTGTCATGAGTTGTACAGGTTCTGTATTACAGAGAAGGT  894

seq1  GATATTAGAACAGCACAGTCAGAATGTATTCAAGACTATATTAAAAAAAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGAACAGCACAGTCAGAATGTATTCAAGACTATATTAAAAAAAG  944

seq1  AACCCTCAAATTAAAATTGTTTTTATATACACAGTAGGTAAAAATTCTCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCAAATTAAAATTGTTTTTATATACACAGTAGGTAAAAATTCTCT  994

seq1  AGACAGTGGCTAAAATTGTATTTAAATACAATTCCTTGGTGACTTTTTGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGGCTAAAATTGTATTTAAATACAATTCCTTGGTGACTTTTTGT  1044

seq1  TGTTGAACAACTTAGTGCCAACAAAGCAGAATTC  1077
      ||||||||||||||||||||||||||||||||||
seq2  TGTTGAACAACTTAGTGCCAACAAAGCAGAATTC  1078


seq1: chr10_35374226_35375302
seq2: B6Ng01-218P15.g_63_1134

seq1  GAATTCAGCAGATGGAAACTTGGTAAAAAGTCAACTGTAAGTCAGATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGATGGAAACTTGGTAAAAAGTCAACTGTAAGTCAGATGGA  50

seq1  GTAGATTTCACCGAAGGCCACACTATTTATGGACTGAATGTTCATTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTTCACCGAAGGCCACACTATTTATGGACTGAATGTTCATTTCAA  100

seq1  GGGTGTTTGTGAGGACTTAAGAGAATATCTTGTAAATTTCCAAGTGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTTGTGAGGACTTAAGAGAATATCTTGTAAATTTCCAAGTGACAA  150

seq1  TGATGCATCACCTCTGACTCTGCTATACCTGTGTTTGTTTGGTTTTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCATCACCTCTGACTCTGCTATACCTGTGTTTGTTTGGTTTTCCAG  200

seq1  CTCATCTGCAAGGGACTTTCTCCAGTGTGTGCAGTGCCTCTGTTATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGCAAGGGACTTTCTCCAGTGTGTGCAGTGCCTCTGTTATTTTC  250

seq1  ATCACTTCCTGGGGATGTTTCCTTTGTGCTTCAAGTGTGATCCACTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTCCTGGGGATGTTTCCTTTGTGCTTCAAGTGTGATCCACTACCA  300

seq1  TGCTATATGCTCTGTTTATTGCAAAGCTAAACAAAGCATGCCTAGGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATGCTCTGTTTATTGCAAAGCTAAACAAAGCATGCCTAGGAGCA  350

seq1  TCTGAAAACAATTAAAAAGTAATTGAAATGAGCTCTGGTCTCTACTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAACAATTAAAAAGTAATTGAAATGAGCTCTGGTCTCTACTAAAC  400

seq1  TCATTAAGGTTTTTATTTCATCCTCCACACTTTGGGGAGATTCAAATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAGGTTTTTATTTCATCCTCCACACTTTGGGGAGATTCAAATCTG  450

seq1  ACCCTTCTATCCCACTGGCCCCCTGCTGGCTTGAGAGATCCCTTGCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTATCCCACTGGCCCCCTGCTGGCTTGAGAGATCCCTTGCCAGA  500

seq1  GGCAGAAAAAGGACCATCAGATTCTGTACAGAGAGTGTTCTCCAAATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAAAAGGACCATCAGATTCTGTACAGAGAGTGTTCTCCAAATGAC  550

seq1  CAGGCAGGGAAAAGTCCTGATGGCTGCCAAGAGGCTTCAGTGGGAGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGGAAAAGTCCTGATGGCTGCCAAGAGGCTTCAGTGGGAGGGAG  600

seq1  GCATCTCTCTGCTTTCTGCCTTTGAGCAGCTGCTCTATGAATTAATAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTCTGCTTTCTGCCTTTGAGCAGCTGCTCTATGAATTAATAAAC  650

seq1  ATCACTGTGGATACACACACATTCTTATTAAGAATTCACAAGCACATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGTGGATACACACACATTCTTATTAAGAATTCACAAGCACATTAA  700

seq1  TCAGGCCACTCTCATGCAACTCAGGAAATTAAAGTTAGCTTTTCTCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCACTCTCATGCAACTCAGGAAATTAAAGTTAGCTTTTCTCTTGC  750

seq1  ATTTTTTTTCCT-GGGAAAAGTCAGAGACAACATTAGAATGAGAAAGAAA  799
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTCCTGGGGAAAAGTCAGAGACAACATTAGAATGAGAAAGAAA  800

seq1  GAAAGGAAGAAAGAAAAAACTTGCTGAAAGGACAGAAACAAGGAAATGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAGAAAGAAAAAACTTGCTGAAAGGACAGAAACAAGGAAATGGA  850

seq1  CAGATTTCGACACTTTCAACAAAGAAAGTTTGAAATCAGTCCAAGTAAGA  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCGACAC-TTCAACAAAGAAAGTTTGAAATCAGTCCAAGTAAGA  899

seq1  CAATATTTACAATGTTCTCAGGGTTTTAAATCAAAATAACATAGTACCTT  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAATATTTACAATGTTCTCAGGG-TTTAAATCAAAATAACATAGTACCTT  948

seq1  AAATATATTAAAAATGTACAGCAACCCCGTTGATGATGCAATTATGTCAA  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAATATATTAAAAATGTACAGCAACCCCGTTGATGATGC-ATTATGTCAA  997

seq1  AATATCAGGCAATATTTTTATATGACTATAACAATAAGTATTAC-GAGAC  1048
      |||||||||||   ||||||||||||||| |||||||||||||| |||||
seq2  AATATCAGGCATATTTTTTATATGACTAT-ACAATAAGTATTACGGAGAC  1046

seq1  TCACTTCCCCTGCCCCATGAGTGTGTGTG  1077
      |||||| |||||  |||||| ||||||||
seq2  TCACTT-CCCTG--CCATGAATGTGTGTG  1072


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