BAC Information

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BAC

Clone NameB6Ng01-219C10
Chromosome10 (Build37)
Map Location 103,725,572 - 103,860,795
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219C10.bB6Ng01-219C10.g
ACCGA035081GA035082
length1,0251,136
definitionB6Ng01-219C10.b B6Ng01-219C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,725,572 - 103,726,101)(103,859,649 - 103,860,795)
sequence
gaattcattttattttacacataattaatttcagtatatctatcatatat
aaatgtatatatttacacatttatatatgtacatacgaacatgtgtacat
tggtacaaaatgtgtataggtctatacatattttttaaaatatgactata
aaatttataaaagcctattaaaattgttttttaaattattttaattttga
gcatcccactcaaaatattttgattaaattcatccaagactcattctgta
aatcttctaagatatatacatagctccatgcccacccaattaaggtcctc
ttttttttaataacgtgtactctagcttatgttgctaatatatgactgca
tatgaggccaatcactgaagtatctgccagaggctatatacttgagaagg
ttcactctccttccccctagacgttcagctgtctgtaacttctcaattag
gggtgagatgctcattaactccttttccctccaaacaagaattcagatgg
acttgatcgtgtgcagaatttgttcaggaaaccatagctttgctgagtgt
atgggtctagtggtcttgccatttcataatatactctttgctctctctct
cccctgcctctggcttttcagcattggaatttcaacatttatgatgtggc
cagggttttaggtatagtatgatatagctattatatttaggtttgagtgc
attttctttgtactttgatcacctgagagggtttttttttctccttaact
aacatccgctgcataaaggaacttctctggtgatgtctgagagatgcaat
tatttgtagatatagagatacaaatttagaggacagtttgagattatgga
atttttagcagaataataatactaattttatacctggcatttctgaactc
caaactattagttcttggcttaagtggaaccaggaaattaattagatatc
ccacaacaatcacatcatcattacacccatggtatgtcttgccatgcagg
ccatcattgtagttcacagctgggt
gaattctatgattaagtcaggctaggagaagacttacctgagaactttga
gaaaaatataaccaactgtatggcacacatagaataaatgggataactaa
gttattaactagtcagggaatagaatgaaggctatttgcctagacattta
ttcatatattagaagcctcagagttatcattttgtgaacctgggcacggg
tggaaaggcctgaagatacaaatgtcacctaatgtgaggcatgaagtcca
aacttagaaagaaccaggtttagagcacgaaaagttcttggacaaaaagc
acaaacaatttcttcccggaaacagataaggttcctatataagggaacgg
aagccaagtgtatttcacaagtgttgcttgtttaagggaatcctctgctt
tagagcaaaggtggctgctatgtacttggacactgcttgtgagcagatga
ctcagtgagcaagtgctggactgtgcagcagtgtctcagggaagtccagg
tgctccagttgagaggagacttcaattgcctgagacagtcacaggaggtg
cagctggtggataccactgtgaagccagcaaatgactgacagcaaggaag
caccaccccttgctgtccatttggtccttgtggggactatttatgtctcc
atggcagagaatggcttcaggcaacagaagccaggcccagactcataagc
cccaaaattctgaactggtaagctcttaaggttgaaaaccataaaagagg
aaagactaatgtagtctttgatttttcaaatcctacctttaataatggtt
cttaaatgctttaacctcccttctatcccagcaccccaagaggtagtgga
gaagaaaggttattaagataaaggggaagtggacctgctcataaatagtt
tctttgaagcaaatccaatatgtgttgtcaggatatttaccatcagtagt
ccagtccaggagtgccaggatagcaaacacaaacatcagcagttgaatga
cccagcagaaagagtgaggcctcagccatttgggcatagtcagcagagtg
acagatgagcagaatgccaagaaaactctgccatgctctctaaagaagtg
aagtcagcaagcctcgaacacaaacaggaaaggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103725572_103726101
seq2: B6Ng01-219C10.b_45_574

seq1  GAATTCATTTTATTTTACACATAATTAATTTCAGTATATCTATCATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTATTTTACACATAATTAATTTCAGTATATCTATCATATAT  50

seq1  AAATGTATATATTTACACATTTATATATGTACATACGAACATGTGTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATATATTTACACATTTATATATGTACATACGAACATGTGTACAT  100

seq1  TGGTACAAAATGTGTATAGGTCTATACATATTTTTTAAAATATGACTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAAAATGTGTATAGGTCTATACATATTTTTTAAAATATGACTATA  150

seq1  AAATTTATAAAAGCCTATTAAAATTGTTTTTTAAATTATTTTAATTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATAAAAGCCTATTAAAATTGTTTTTTAAATTATTTTAATTTTGA  200

seq1  GCATCCCACTCAAAATATTTTGATTAAATTCATCCAAGACTCATTCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCACTCAAAATATTTTGATTAAATTCATCCAAGACTCATTCTGTA  250

seq1  AATCTTCTAAGATATATACATAGCTCCATGCCCACCCAATTAAGGTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTAAGATATATACATAGCTCCATGCCCACCCAATTAAGGTCCTC  300

seq1  TTTTTTTTAATAACGTGTACTCTAGCTTATGTTGCTAATATATGACTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAATAACGTGTACTCTAGCTTATGTTGCTAATATATGACTGCA  350

seq1  TATGAGGCCAATCACTGAAGTATCTGCCAGAGGCTATATACTTGAGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGCCAATCACTGAAGTATCTGCCAGAGGCTATATACTTGAGAAGG  400

seq1  TTCACTCTCCTTCCCCCTAGACGTTCAGCTGTCTGTAACTTCTCAATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCTCCTTCCCCCTAGACGTTCAGCTGTCTGTAACTTCTCAATTAG  450

seq1  GGGTGAGATGCTCATTAACTCCTTTTCCCTCCAAACAAGAATTCAGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGATGCTCATTAACTCCTTTTCCCTCCAAACAAGAATTCAGATGG  500

seq1  ACTTGATCGTGTGCAGAATTTGTTCAGGAA  530
      ||||||||||||||||||||||||||||||
seq2  ACTTGATCGTGTGCAGAATTTGTTCAGGAA  530

seq1: chr10_103859649_103860795
seq2: B6Ng01-219C10.g_67_1202 (reverse)

seq1  ATACC-TTCCTGGTTTTGTGTCTGAGCCTTTGCTGACCTTCACTTCTTTT  49
      ||||| ||||||  |||||||  ||| | ||||||| ||||||||| |||
seq2  ATACCTTTCCTG--TTTGTGTTCGAGGC-TTGCTGA-CTTCACTTC-TTT  45

seq1  AGAGAGGCATGGGCAGAGTTTTCCTTGGCATTCCTGCTCATCCTGGTCAC  99
      ||||| |||| ||||||||||| ||||||||| |||||||||   |||||
seq2  AGAGA-GCAT-GGCAGAGTTTT-CTTGGCATT-CTGCTCATC--TGTCAC  89

seq1  TCCTGCTGACTTATGCCAAATTGGCTGAGGCCTCACTCTTTCTGCTGGGT  149
      | |||||||| |||||| || |||||||||||||||||||||||||||||
seq2  T-CTGCTGAC-TATGCCCAAATGGCTGAGGCCTCACTCTTTCTGCTGGGT  137

seq1  CATTCAACTGCTGATGTTTGTGTTTGCTATCCTGGCACTCCTGGACTGGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACTGCTGATGTTTGTGTTTGCTATCCTGGCACTCCTGGACTGGA  187

seq1  CTACTGATGGTAAATATCCTGACAACACATATTGGATTTGCTTCAAAG-A  248
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTACTGATGGTAAATATCCTGACAACACATATTGGATTTGCTTCAAAGAA  237

seq1  ACTATTTATGAGCAGGTCCACTTCCCCCTTATCTTAATAACCTTTCTTCT  298
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTATTTATGAGCAGGTCCACTTCCCCTTTATCTTAATAACCTTTCTTCT  287

seq1  CCACTACCTCTTGGGGTGCTGGGATAGAAGGGAGGTTAAAGCATTTAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACCTCTTGGGGTGCTGGGATAGAAGGGAGGTTAAAGCATTTAAGA  337

seq1  ACCATTATTAAAGGTAGGATTTGAAAAATCAAAGACTACATTAGTCTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTATTAAAGGTAGGATTTGAAAAATCAAAGACTACATTAGTCTTTC  387

seq1  CTCTTTTATGGTTTTCAACCTTAAGAGCTTACCAGTTCAGAATTTTGGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTATGGTTTTCAACCTTAAGAGCTTACCAGTTCAGAATTTTGGGG  437

seq1  CTTATGAGTCTGGGCCTGGCTTCTGTTGCCTGAAGCCATTCTCTGCCATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAGTCTGGGCCTGGCTTCTGTTGCCTGAAGCCATTCTCTGCCATG  487

seq1  GAGACATAAATAGTCCCCACAAGGACCAAATGGACAGCAAGGGGTGGTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATAAATAGTCCCCACAAGGACCAAATGGACAGCAAGGGGTGGTGC  537

seq1  TTCCTTGCTGTCAGTCATTTGCTGGCTTCACAGTGGTATCCACCAGCTGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGCTGTCAGTCATTTGCTGGCTTCACAGTGGTATCCACCAGCTGC  587

seq1  ACCTCCTGTGACTGTCTCAGGCAATTGAAGTCTCCTCTCAACTGGAGCAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGTGACTGTCTCAGGCAATTGAAGTCTCCTCTCAACTGGAGCAC  637

seq1  CTGGACTTCCCTGAGACACTGCTGCACAGTCCAGCACTTGCTCACTGAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTTCCCTGAGACACTGCTGCACAGTCCAGCACTTGCTCACTGAGT  687

seq1  CATCTGCTCACAAGCAGTGTCCAAGTACATAGCAGCCACCTTTGCTCTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTCACAAGCAGTGTCCAAGTACATAGCAGCCACCTTTGCTCTAA  737

seq1  AGCAGAGGATTCCCTTAAACAAGCAACACTTGTGAAATACACTTGGCTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGATTCCCTTAAACAAGCAACACTTGTGAAATACACTTGGCTTC  787

seq1  CGTTCCCTTATATAGGAACCTTATCTGTTTCCGGGAAGAAATTGTTTGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCTTATATAGGAACCTTATCTGTTTCCGGGAAGAAATTGTTTGTG  837

seq1  CTTTTTGTCCAAGAACTTTTCGTGCTCTAAACCTGGTTCTTTCTAAGTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTCCAAGAACTTTTCGTGCTCTAAACCTGGTTCTTTCTAAGTTT  887

seq1  GGACTTCATGCCTCACATTAGGTGACATTTGTATCTTCAGGCCTTTCCAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCATGCCTCACATTAGGTGACATTTGTATCTTCAGGCCTTTCCAC  937

seq1  CCGTGCCCAGGTTCACAAAATGATAACTCTGAGGCTTCTAATATATGAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCCCAGGTTCACAAAATGATAACTCTGAGGCTTCTAATATATGAAT  987

seq1  AAATGTCTAGGCAAATAGCCTTCATTCTATTCCCTGACTAGTTAATAACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTAGGCAAATAGCCTTCATTCTATTCCCTGACTAGTTAATAACT  1037

seq1  TAGTTATCCCATTTATTCTATGTGTGCCATACAGTTGGTTATATTTTTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATCCCATTTATTCTATGTGTGCCATACAGTTGGTTATATTTTTCT  1087

seq1  CAAAGTTCTCAGGTAAGTCTTCTCCTAGCCTGACTTAATCATAGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTCTCAGGTAAGTCTTCTCCTAGCCTGACTTAATCATAGAATTC  1136