BAC Information

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BAC

Clone NameB6Ng01-219F02
Chromosome10 (Build37)
Map Location 63,327,699 - 63,328,737
singlet/doubletsinglet
Overlap geneCtnna3
Upstream geneCxxc6, Slc25a16, Dna2l, Rufy2, Hnrph3, 3110049J23Rik, Pbld, Atoh7, Mypn, 1700120B22Rik, Herc4, Sirt1, Dnajc12, LOC665182, EG631906
Downstream geneLrrtm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219F02.bB6Ng01-219F02.g
ACCGA035190GA035191
length1,0311,184
definitionB6Ng01-219F02.b B6Ng01-219F02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagcaagctcccaggatgcaaccctgactgtgtaaccctagatg
agttggaaagtatgtggcaaacaagcttgggcctttgcctacttcctcag
ccactaaaacagaaatcatttaaaacgaaaggaaggtcattgatcaaaaa
tatactaaggaggctggtccgatccacaagaacacccttgggaatctaag
aatctgaaatacgcagagtactggaatgtgacacagctgtcacttgggag
caatagcatttactgggccctcagaagcctggcatgtgcaataccagatc
catttctggggtctctgtgatttccaagagggcccatctcttggtcattt
ctactttgtctatcttgcttctgtatgcagcctaactggggactagggat
attcatatcaccggttccctggtctgctcagctccattttcctgtccttc
cccttttgggctgacactttcttatgcaggacacttagctagccttcatt
tgtttttacctgcttcacatgatttgtctttggtgtcttttgctataaaa
gaagtccggagcagcttctctccgagattgaagggacgcattctatcaaa
ttggcaggcagggtaagaagctctcactgcctttctgggacatcgtcgaa
gtggatgaatgcctttgatccaggatcagagtgggccagggatggaaggg
agacaactgcaaaagcctgcacgctgggttccgccacgggagatcaggac
aatatgatttctgtggatgtccatttgaggaaaaaaagtcatgagtggtt
tattctagaaacctccaaacatctacgagcttttcctttttgcacggtgt
agtgatttagcatttgtagtgccagtaactcaaaggcagagagaactctt
attggatttgtaatccaatgagaaatacaaccctcacacatgtggctggc
ggatgactcccgcggtggtggagctatgagtgctatccatctctcctctg
aaatatgattctgcgtagtgatcacatcctt
gaattctttcccaccatgcaatgctactctggaaccaagaactgagctga
tcacactggggaaaaaaatgtatcctgtgagctcttgatcctcttctggg
catcactctggaatctatggtctatattctgagtttgtatatggtctata
ctctgggatccatgaccatccatcacagagattgccctggggtccatgtg
gctctgttacatagtcatagtttgaaatttggaaacagaagcacttgcaa
gggtttctttcttacaacctagttaggatattagtcataacagcaggcca
gatctgataccataaaaaattatctgtgtatatttaacatatgtgtttaa
acataaaataggtaaatatttttctgattcattatgtatggacagggctt
ttaatggcttacttattgggaagatatcttttgtcctttcctactcttgt
ttaagtataataaactcctatcagtacacaaagccaattgcagtaatctt
tagcatctttctagtatagctctctactctttgttttcataaattcctga
tttattcttgacttttattttttaatacagattttatttatttgttttta
tttttatttatttttaatttattttttatattccatattccatttccttc
ccccatccaccctctgactgctccacatcccacacctcctccccacccta
cccagtctccacatggatgccccaaccctacctgacctctaaactccctg
ggccctccagtctcttgagggttaggtgcatcatctctgaatgaacacag
acccggatgtcctttaccgtatgtgtgttaggggcctcatatcagctgct
gtatgctgtctgtttggtggtcaaatgtttgagagatctcaggagtccag
attaattgagactactggtcctcctatagactgccttctcctcagcttct
tttcagcctttcctattcaacatcaaggggtcagcttggttatgttccct
ttggttgggtgcaaataatctgcatctgactctttcagatgcttctgggg
tcttcagaagagaaatccatgaaggatccttccttgtatagtgtcagctg
gactccccatgagttggatccaattggtctgtcacatagaactctttccc
tcgagctctaatcccatactcattcccagttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_63327699_63328737
seq2: B6Ng01-219F02.b_46_1076

seq1  GAATTCTAGCAAGCTCCCAGGATGCAACCCTGACTGTGTAACCCTAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCAAGCTCCCAGGATGCAACCCTGACTGTGTAACCCTAGATG  50

seq1  AGTTGGAAAGTATGTGGCAAACAAGCTTGGGCCTTTGCCTACTTCCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAAAGTATGTGGCAAACAAGCTTGGGCCTTTGCCTACTTCCTCAG  100

seq1  CCACTAAAACAGAAATCATTTAAAACGAAAGGAAGGTCATTGATCAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAAACAGAAATCATTTAAAACGAAAGGAAGGTCATTGATCAAAAA  150

seq1  TATACTAAGGAGGCTGGTCCGATCCACAAGAACACCCTTGGGAATCTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAAGGAGGCTGGTCCGATCCACAAGAACACCCTTGGGAATCTAAG  200

seq1  AATCTGAAATACGCAGAGTACTGGAATGTGACACAGCTGTCACTTGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAAATACGCAGAGTACTGGAATGTGACACAGCTGTCACTTGGGAG  250

seq1  CAATAGCATTTACTGGGCCCTCAGAAGCCTGGCATGTGCAATACCAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCATTTACTGGGCCCTCAGAAGCCTGGCATGTGCAATACCAGATC  300

seq1  CATTTCTGGGGTCTCTGTGATTTCCAAGAGGGCCCATCTCTTGGTCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGGGGTCTCTGTGATTTCCAAGAGGGCCCATCTCTTGGTCATTT  350

seq1  CTACTTTGTCTATCTTGCTTCTGTATGCAGCCTAACTGGGGACTAGGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGTCTATCTTGCTTCTGTATGCAGCCTAACTGGGGACTAGGGAT  400

seq1  ATTCATATCACCGGTTCCCTGGTCTGCTCAGCTCCATTTTCCTGTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATCACCGGTTCCCTGGTCTGCTCAGCTCCATTTTCCTGTCCTTC  450

seq1  CCCTTTTGGGCTGACACTTTCTTATGCAGGACACTTAGCTAGCCTTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGGGCTGACACTTTCTTATGCAGGACACTTAGCTAGCCTTCATT  500

seq1  TGTTTTTACCTGCTTCACATGATTTGTCTTTGGTGTCTTTTGCTATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTACCTGCTTCACATGATTTGTCTTTGGTGTCTTTTGCTATAAAA  550

seq1  GAAGTCCGGAGCAGCTTCTCTCCGAGATTGAAGGGACGCATTCTATCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCGGAGCAGCTTCTCTCCGAGATTGAAGGGACGCATTCTATCAAA  600

seq1  TTGGCAGGCAGGGTAAGAAGCTCTCACTGCCTTTCTGGGACATCGTCGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGGCAGGGTAAGAAGCTCTCACTGCCTTTCTGGGACATCGTCGAA  650

seq1  GTGGATGAATGCCTTTGATCCAGGATCAGAGTGGGCCAGGGATGGAAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGAATGCCTTTGATCCAGGATCAGAGTGGGCCAGGGATGGAAGGG  700

seq1  AGACAACTGCAAAAGCCTGCACGCTGGGTTCCGCCACGGGAGATCAGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACTGCAAAAGCCTGCACGCTGGGTTCCGCCACGGGAGATCAGGAC  750

seq1  AATATGATTTCTGTGGATGTCCATTTGAGGAAAAAAAGTCATGAGTGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATTTCTGTGGATGTCCATTTGAGGAAAAAAAGTCATGAGTGGTT  800

seq1  TATTCTAGAAACCTCCAAACATCTACGAGCTTTTCCTTTTTGCACGGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAGAAACCTCCAAACATCTACGAGCTTTTCCTTTTTGCACGGTGT  850

seq1  AGTGATTTAGCATTTGTAGTGCCAGTAACTCAAAGGCAGAGAGAACTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTAGCATTTGTAGTGCCAGTAACTCAAAGGCAGAGAGAACTCTT  900

seq1  ATTGGATTTGTAATCCAATGAGAAATACAACCCTCACACATGTGGCTGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATTTGTAATCCAATGAGAAATACAACCCTCACACATGTGGCTGGC  950

seq1  GGAATGACTCCCGCGGTGGTGGAGCTATGAGGTGCTATCCATCTCTCCTC  1000
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GG-ATGACTCCCGCGGTGGTGGAGCTATGA-GTGCTATCCATCTCTCCTC  998

seq1  TGAAATATGAATTCTGCGTTAGTGGAATTCACCATCCTT  1039
      ||||||||| |||||||| |||||    ||| |||||||
seq2  TGAAATATG-ATTCTGCG-TAGTG---ATCA-CATCCTT  1031