BAC Information

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BAC

Clone NameB6Ng01-219H18
Chromosome10 (Build37)
Map Location 103,247,421 - 103,248,557
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219H18.bB6Ng01-219H18.g
ACCGA035308GA035309
length1,1371,182
definitionB6Ng01-219H18.b B6Ng01-219H18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtagcaacaaaatgttagtttgtctgaatttctgaaacaagg
agatgggtgtatgtaaatagtataccctgcttgacatttagacaaatgaa
ggcaaggtcatttaatcggaaagaggaggaatttctctttaccagatttt
ctatttcatttgaactgacatctggctctaatttttctttccaacttaaa
attcttttattcacttgatattggttcaaagttgacatttttaaaaaatc
ttgcattttaaaacatcttcataatttagaacacagaatgctattgccat
tatctgcacactagagggcactaagatatgctaacatggcatgcactcag
aatgataccttagataacttctgaggaatcattcttttcactttgaaatc
tttaaaaaagacacagaaaaaaatatagttaatactacactatagatatt
aattttttaaaaaatagcatgaagctatccattttaaattacattttcat
tatatatattggtttaggtctaggatcaagtgtacaatggcaatcgtgtc
aacttttaatttaaggtacattttggtgaatatgaatgtcttgttatatt
agataaaatcttgttgaaaatttcctatgaattttcctaaagttatacct
ctcaaaatcaacttaataatgtctcctactgatctttaatgttaactttt
aaactatcttgatataattgcatcaatctagtataatttcattgaaaaca
caatagcctaccatcgcaaggtctgaaaaataaccagctattattgttgt
tgttgttgttgttgttgttcaggacattaacactcacaatgaatatattt
gcattgtcattttacggtttataaatgtgctcaaaaccacagtggtattt
caattatccgatgacaattttaatttatacttttctcaaatatttcaaaa
tactctacactatttcttgaattcctttctctaagcatttttagattcat
ttataagcagctgattttcctccgtttaccttttggccttctttattatc
tactaatagatatgagaacagggatttgccacctgtgaatttgaaagtat
tcatattgtgttctagatttccggagcataaatctaa

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacaggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
attcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgacgtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggatacccaagatataagatacaatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgccccttcttagaattgggaac
aaaacacccatggaaggagttacaaagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatatactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaac
agagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaatgggatctgcaccct
ataggtcgacacattatgaactaaccagtaccccggagctctgctctagc
tgcatatgtatcaaaagatgcctagtcgcatcactggaagagaaaggtca
attgacttgccaaccttaatatgtccagtacaggatgccatgactaaatg
gaatgtggtgtctaggggaattctatcatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103247421_103248557
seq2: B6Ng01-219H18.b_50_1186

seq1  GAATTCCAGTAGCAACAAAATGTTAGTTTGTCTGAATTTCTGAAACAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAGCAACAAAATGTTAGTTTGTCTGAATTTCTGAAACAAGG  50

seq1  AGATGGGTGTATGTAAATAGTATACCCTGCTTGACATTTAGACAAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGTGTATGTAAATAGTATACCCTGCTTGACATTTAGACAAATGAA  100

seq1  GGCAAGGTCATTTAATCGGAAAGAGGAGGAATTTCTCTTTACCAGATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGTCATTTAATCGGAAAGAGGAGGAATTTCTCTTTACCAGATTTT  150

seq1  CTATTTCATTTGAACTGACATCTGGCTCTAATTTTTCTTTCCAACTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCATTTGAACTGACATCTGGCTCTAATTTTTCTTTCCAACTTAAA  200

seq1  ATTCTTTTATTCACTTGATATTGGTTCAAAGTTGACATTTTTAAAAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTATTCACTTGATATTGGTTCAAAGTTGACATTTTTAAAAAATC  250

seq1  TTGCATTTTAAAACATCTTCATAATTTAGAACACAGAATGCTATTGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTTAAAACATCTTCATAATTTAGAACACAGAATGCTATTGCCAT  300

seq1  TATCTGCACACTAGAGGGCACTAAGATATGCTAACATGGCATGCACTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCACACTAGAGGGCACTAAGATATGCTAACATGGCATGCACTCAG  350

seq1  AATGATACCTTAGATAACTTCTGAGGAATCATTCTTTTCACTTTGAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACCTTAGATAACTTCTGAGGAATCATTCTTTTCACTTTGAAATC  400

seq1  TTTAAAAAAGACACAGAAAAAAATATAGTTAATACTACACTATAGATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAGACACAGAAAAAAATATAGTTAATACTACACTATAGATATT  450

seq1  AATTTTTTAAAAAATAGCATGAAGCTATCCATTTTAAATTACATTTTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTAAAAAATAGCATGAAGCTATCCATTTTAAATTACATTTTCAT  500

seq1  TATATATATTGGTTTAGGTCTAGGATCAAGTGTACAATGGCAATCGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATTGGTTTAGGTCTAGGATCAAGTGTACAATGGCAATCGTGTC  550

seq1  AACTTTTAATTTAAGGTACATTTTGGTGAATATGAATGTCTTGTTATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAATTTAAGGTACATTTTGGTGAATATGAATGTCTTGTTATATT  600

seq1  AGATAAAATCTTGTTGAAAATTTCCTATGAATTTTCCTAAAGTTATACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAATCTTGTTGAAAATTTCCTATGAATTTTCCTAAAGTTATACCT  650

seq1  CTCAAAATCAACTTAATAATGTCTCCTACTGATCTTTAATGTTAACTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATCAACTTAATAATGTCTCCTACTGATCTTTAATGTTAACTTTT  700

seq1  AAACTATCTTGATATAATTGCATCAATCTAGTATAATTTCATTGAAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATCTTGATATAATTGCATCAATCTAGTATAATTTCATTGAAAACA  750

seq1  CAATAGCCTACCATCGCAAGGTCTGAAAAATAACCAGCTATTATTGTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCTACCATCGCAAGGTCTGAAAAATAACCAGCTATTATTGTTGT  800

seq1  TGTTGTTGTTGTTGTTGTTCAGGACATTAACACTCACAATGAATATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTGTTGTTGTTCAGGACATTAACACTCACAATGAATATATTT  850

seq1  GCATTGTCATTTTACGGTTTATAAATGTGCTCAAAACCACAGTGGTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTCATTTTACGGTTTATAAATGTGCTCAAAACCACAGTGGTATTT  900

seq1  CAATTATCCGATGACAATTTTAATTTATACTTTTCTCAAATATTTCAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATCCGATGACAATTTTAATTTATACTTTTCTCAAATATTTCAAAA  950

seq1  TACTCTACACTATTTCTTGAATTCCTTTCTCTAAGCATTTTTAGATTCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTACACTATTTCTTGAATTCCTTTCTCTAAGCATTTTTAGATTCAT  1000

seq1  TTATAAGCAGCTGATTTT-CTCCGTTTACCTTTTGGCCTTCTTTATTATC  1049
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTATAAGCAGCTGATTTTCCTCCGTTTACCTTTTGGCCTTCTTTATTATC  1050

seq1  TACTAATAAGATATGAGAACAGGGATTTTGCCACCTGTGAATTGAAAAGT  1099
      ||||||| ||||||||||||||||| |||||||||||||||||  |||||
seq2  TACTAAT-AGATATGAGAACAGGGA-TTTGCCACCTGTGAATTTGAAAGT  1098

seq1  ATTCATATTGTG-TCTAGATTT-CGGAGCCATTAATCTAA  1137
      |||||||||||| ||||||||| ||||| ||| |||||||
seq2  ATTCATATTGTGTTCTAGATTTCCGGAG-CATAAATCTAA  1137


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