BAC Information

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BAC

Clone NameB6Ng01-220H02
Chromosome10 (Build37)
Map Location 15,027,887 - 15,201,684
singlet/doubletdoublet
Overlap genenone
Upstream geneGpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC637043, LOC100039492, LOC671439, LOC382457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220H02.bB6Ng01-220H02.g
ACCGA035998GA035999
length1,157905
definitionB6Ng01-220H02.b B6Ng01-220H02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,200,545 - 15,201,684)(15,027,887 - 15,028,838)
sequence
gaattcactcagctttggaatggctttcatcttatcacttcatctgagga
aataaaagtgacacttataggagggatttgattttctagcattaaggtag
tcagtacaataaatataaatgtcatagttctaaataattacatttatcaa
gttggatgttctttaatggttatgatatttattctcatgaggaaatttct
tatgttttactatatatacagggaccattaatgctaacaaacattgaaaa
taatattcaataatgatagaaaatatagacatataaataactgactggat
aatagaaatcagtaaatgattaaatgatagtttgtctagaaaagttgtaa
ttatgaatgataaaagtcatctccacagtcagtataaataaacttaggaa
atgagtgcaagagttttttcttttaaataaattatttatatttcatcatg
gaaaatgaagaaagtatcattttgtatacaggtgtactacttactccttg
gatttttgaaaatgtatatgcattaaaaatgatgttcctaagacagatat
agtaacatactccttcaatcccagcatttgagagacaaagacacctgtga
gttcaaagccagccagtttaacatagaggactccaggacaactagactta
tatagagtgagtctgtctcaaaactaactaaaacaatgataaaacaaaac
aaacaaacataaatgatattctacacaacatgaaacaattattaactatg
aaaagcagtacattagggtcacacaggagatggacttttactcagagtgt
agggcaagtttacaagagggagaagtgggtaattcttggccatgcaaatt
tattaatacaacttgactaaatatgccagattatgtgtcccattgaagtg
agactttggcttttggaagattgtatatcctgattgagactgtcaatcag
aagatttaactctcccctgtgatgtttaaatcttacccaatgaatctaga
acaggaatacgagaaacccatcatcctaacttatgtaggagttcccgaag
agttcctggtttttcatgttattatggtttgctattttcagagcacactg
attaattttcctgactccatacgtgaaccaggaaaccgttaaaaatagat
aaacctg
gaattcaatagcatcaccagaatttctttgtctcataaggttttgacagg
actttctttctttctttctttctttctttctttctttctttctttctttc
tttctttctttctttctttctttcctttctttcttttctttctttctttc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tctttcttccttccttccttccttccttccttccttcccccccctcaccc
ccctctctctctctttttatatagtccctttgcgtttacactatagcttc
tagttttatctatttgtgggatgcctgtgagaacaaacacggtctatgcc
tggaaaaaaacataaaatactattaaaataattctatgttgaaaaaaaaa
gaggaaataaatgtttggatggacgttgtagctctatgatgtagtaagct
cactaaaagatgtagtattttagatatattatttatctttgtgtgtgtga
atgttttgcctccatgtatgtgtgccatgcataccgggtacctgcagatt
ccagactgagtgaaagattccaagagcagagctacacgtgctgtaaccac
ctcctacgtgcaagaatctgtcctacctggatggtggaactgagttgtat
agattcaatgtagattgagtgattaatagatgcacttcagcttattattg
cattctctattcctgactgatgatctgtatcagtgtattgccgtacatac
tgcttcccatacacatttggcatacatcaccttcattcttgcaatatagc
tgtatttgactatggagtcatccactctgtcactggattgcagatatata
ttccctagctagaatatatcatgctaaatacttgcatgattacatcattt
tgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15200545_15201684
seq2: B6Ng01-220H02.b_47_1203 (reverse)

seq1  CAGGTTT-TCTA-TTTTAAC-GTTTCCTGGTTCAC-TATGAAGTCAGG-A  45
      ||||||| |||| ||||||| |||||||||||||| |||| ||||||| |
seq2  CAGGTTTATCTATTTTTAACGGTTTCCTGGTTCACGTATGGAGTCAGGAA  50

seq1  AATTAATCAGTGTGCTCTG-AAATAGCAAACCATATTACCATTGAAAAAC  94
      ||||||||||||||||||| ||||||||||||||| || |||  |||| |
seq2  AATTAATCAGTGTGCTCTGAAAATAGCAAACCATAATAACATGAAAAACC  100

seq1  AGGAACTTCTTC-GGAACTCTAACATTAGTTA-GATGAT-GGTTTCTCGT  141
      |||||| ||||| |||||||  |||| ||||| |||||| ||||||||||
seq2  AGGAAC-TCTTCGGGAACTCCTACATAAGTTAGGATGATGGGTTTCTCGT  149

seq1  AATTCTG-TCTAGATTCA-TGGGT-AGATTT-AACATCACA-GGGAGAGT  186
      | | ||| |||||||||| ||||| |||||| ||||||||| ||||||||
seq2  ATTCCTGTTCTAGATTCATTGGGTAAGATTTAAACATCACAGGGGAGAGT  199

seq1  T-AATC-TCTGATTGACAGTCTCAATCA-GATATACAATCTTCCAAAAGC  233
      | |||| ||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAATCTTCTGATTGACAGTCTCAATCAGGATATACAATCTTCCAAAAGC  249

seq1  CAAAGTCTCACTTCAATGGGACACATAATCTGGCATATTTAGTCAAGTTG  283
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCTCACTTCAATGGGACACATAATCTGGCATATTTAGTCAAGTTG  299

seq1  TATT-ATTAATTTGCATGGCCAAGAATTACCCACTTCTCCCTCTTGTAAA  332
      |||| || ||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAAATTTGCATGGCCAAGAATTACCCACTTCTCCCTCTTGTAAA  349

seq1  CTTGCCCTACACTCTGAGTAAAAGTCCATCTCCTGTGTGACCCTAATGTA  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCTACACTCTGAGTAAAAGTCCATCTCCTGTGTGACCCTAATGTA  399

seq1  CTGCTTTTCATAGTTAATAATTGTTTCATGTTGTGTAGAATATCATTTAT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTCATAGTTAATAATTGTTTCATGTTGTGTAGAATATCATTTAT  449

seq1  GTTTGTTTGTTTTGTTTTATCATTGTTTTAGTTAGTTTTGAGACAGACTC  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTTGTTTTATCATTGTTTTAGTTAGTTTTGAGACAGACTC  499

seq1  ACTCTATATAAGTCTAGTTGTCCTGGAGTCCTCTATGTTAAACTGGCTGG  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATATAAGTCTAGTTGTCCTGGAGTCCTCTATGTTAAACTGGCTGG  549

seq1  CTTTGAACTCACAGGTGTCTTTGTCTCTCAAATGCTGGGATTGAAGGAGT  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACTCACAGGTGTCTTTGTCTCTCAAATGCTGGGATTGAAGGAGT  599

seq1  ATGTTACTATATCTGTCTTAGGAACATCATTTTTAATGCATATACATTTT  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACTATATCTGTCTTAGGAACATCATTTTTAATGCATATACATTTT  649

seq1  CAAAAATCCAAGGAGTAAGTAGTACACCTGTATACAAAATGATACTTTCT  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATCCAAGGAGTAAGTAGTACACCTGTATACAAAATGATACTTTCT  699

seq1  TCATTTTCCATGATGAAATATAAATAATTTATTTAAAAGAAAAAACTCTT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCCATGATGAAATATAAATAATTTATTTAAAAGAAAAAACTCTT  749

seq1  GCACTCATTTCCTAAGTTTATTTATACTGACTGTGGAGATGACTTTTATC  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCATTTCCTAAGTTTATTTATACTGACTGTGGAGATGACTTTTATC  799

seq1  ATTCATAATTACAACTTTTCTAGACAAACTATCATTTAATCATTTACTGA  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAATTACAACTTTTCTAGACAAACTATCATTTAATCATTTACTGA  849

seq1  TTTCTATTATCCAGTCAGTTATTTATATGTCTATATTTTCTATCATTATT  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTATCCAGTCAGTTATTTATATGTCTATATTTTCTATCATTATT  899

seq1  GAATATTATTTTCAATGTTTGTTAGCATTAATGGTCCCTGTATATATAGT  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTATTTTCAATGTTTGTTAGCATTAATGGTCCCTGTATATATAGT  949

seq1  AAAACATAAGAAATTTCCTCATGAGAATAAATATCATAACCATTAAAGAA  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAAGAAATTTCCTCATGAGAATAAATATCATAACCATTAAAGAA  999

seq1  CATCCAACTTGATAAATGTAATTATTTAGAACTATGACATTTATATTTAT  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAACTTGATAAATGTAATTATTTAGAACTATGACATTTATATTTAT  1049

seq1  TGTACTGACTACCTTAATGCTAGAAAATCAAATCCCTCCTATAAGTGTCA  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGACTACCTTAATGCTAGAAAATCAAATCCCTCCTATAAGTGTCA  1099

seq1  CTTTTATTTCCTCAGATGAAGTGATAAGATGAAAGCCATTCCAAAGCTGA  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTCCTCAGATGAAGTGATAAGATGAAAGCCATTCCAAAGCTGA  1149

seq1  GTGAATTC  1140
      ||||||||
seq2  GTGAATTC  1157

seq1: chr10_15027887_15028838
seq2: B6Ng01-220H02.g_66_970

seq1  GAATTCAATAGCATCACCAGAATTTCTTTGTCTCATAAGGTTTTGACAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGCATCACCAGAATTTCTTTGTCTCATAAGGTTTTGACAGG  50

seq1  ACTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  100

seq1  TTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTTCTTTCTTTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTTCTTTCTTTCTTTC  150

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  200

seq1  TCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCCCCCCTCCCCC  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCCCCCCTCACCC  250

seq1  CCCTCTCTCTCTCTTTTTATATAGTCCCTTTGCGTTTACACTATAGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTCTCTCTTTTTATATAGTCCCTTTGCGTTTACACTATAGCTTC  300

seq1  TAGTTTTATCTATTTGTGGGATGCCTGTGAGAACAAACACGGTCTATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTATCTATTTGTGGGATGCCTGTGAGAACAAACACGGTCTATGCC  350

seq1  TGGAAAAAAACATAAAATACTATTAAAATAATTCTATGTTGAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAACATAAAATACTATTAAAATAATTCTATGTTGAAAAAAAAA  400

seq1  GAGGAAATAAATGTTTGGATGGACGTTGTAGCTCTATGATGTAGTAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAATAAATGTTTGGATGGACGTTGTAGCTCTATGATGTAGTAAGCT  450

seq1  CACTAAAAGATGTAGTATTTTAGAAAATATTATTTATCTTTGTGTGTGTG  500
      ||||||||||||||||||||||| | ||||||||||||||||||||||||
seq2  CACTAAAAGATGTAGTATTTTAG-ATATATTATTTATCTTTGTGTGTGTG  499

seq1  AATGTTTTGCCTCCATGTATGTGTGCCCCATGCATACCGGGTACCTGCAG  550
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  AATGTTTTGCCTCCATGTATGTGTG--CCATGCATACCGGGTACCTGCAG  547

seq1  ATTCCAGAAATGAGTGGAAGATTCCCAAGAGCAGGAGCTACACGTGGCTG  600
      ||||||| | |||||| |||||| ||||||||| ||||||||||| ||||
seq2  ATTCCAG-ACTGAGTGAAAGATT-CCAAGAGCA-GAGCTACACGT-GCTG  593

seq1  TAACCACCTCCTACGTGCAAGAATCTGTCCTACCTGGATGGTGGGAACTG  650
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAACCACCTCCTACGTGCAAGAATCTGTCCTACCTGGATGGT-GGAACTG  642

seq1  AGTTTGTATAGATTCAATGTAGATTTTTGAGTGATTAATAGATGCAAAAT  700
      || ||||||||||||||||||||   |||||||||||||||||||   | 
seq2  AG-TTGTATAGATTCAATGTAGA---TTGAGTGATTAATAGATGC---AC  685

seq1  TTCAAAGCTTATTTTATTGCATTCTCTATTTTCCTGACTGATGAATCTGT  750
      |||  ||||||  |||||||||||||||  ||||||||||||| ||||| 
seq2  TTC--AGCTTA--TTATTGCATTCTCTA--TTCCTGACTGATG-ATCTG-  727

seq1  TATCAGGGTGTATTGCCGGTACATACTGCTTTCCCATACACATTTGGCAT  800
      |||||  |||||||||| ||||||||||| ||||||||||||||||||| 
seq2  TATCA--GTGTATTGCC-GTACATACTGC-TTCCCATACACATTTGGCA-  772

seq1  TTTCATCACCCCTTCATTC-TGCAATATAAGCTGTATTTTGGCCTATGAA  849
       | |||||  ||||||||| |||||||| ||||||||||  | ||||| |
seq2  -TACATCA--CCTTCATTCTTGCAATAT-AGCTGTATTT--GACTATGGA  816

seq1  GAACATCCCACTTCTGTCACTGGGATTTGCAGATATATATTTCCCCCTAG  899
      |  ||| |||| |||||||||||   |||||||||||||||   ||||||
seq2  G-TCAT-CCAC-TCTGTCACTGG--ATTGCAGATATATATT---CCCTAG  858

seq1  CTAGAAATATATCCATGCTAAATACTTTGCATGTTTAACCATTCATTTTG  949
      |||| ||||||| |||||||||||| ||||||| |||  || ||||||||
seq2  CTAG-AATATAT-CATGCTAAATAC-TTGCATGATTA--CA-TCATTTTG  902

seq1  CTA  952
      |||
seq2  CTA  905