BAC Information

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BAC

Clone NameB6Ng01-220M23
Chromosome10 (Build37)
Map Location 40,436,042 - 40,436,929
singlet/doubletsinglet
Overlap gene9030224M15Rik
Upstream geneE130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10, Bxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, Cdc2l6, LOC666374, Slc22a16, Ddo
Downstream geneCdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220M23.bB6Ng01-220M23.g
ACCGA036276GA036277
length686887
definitionB6Ng01-220M23.b B6Ng01-220M23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatctcaaatggttgagaagcacttaaaaaactg
ttcaacattcttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaaactcaggtgacag
cagatgctggcgaggatatggagaaagaagaacactcctccattgttggt
gggattgcaagctggtacaaccactctggaaatcagtctggcagttccta
agaaaattggaaatagttctacctgaggacccagctataccattcctggg
catatacccaagacatgttctaacatatatcaaggacacatgctccacta
ttttcatagcagccttactcataatattcagaagctagaaacaacccaaa
tgtccctcaacagaagaatggatacagaaaatgtggtacatttacacaat
ggagtactaagcaatgattaaaaacaatgactacatgaaattcacaggca
aatggatggaactgagtgaggtaacacagacacagaacacacatagtatg
cactcactgataagtgaatattagctcaaaagctcacactgcctaggacc
atatggagtgtagaaggaagaaagcccatgctttagtcctgcatgaagaa
gtgaacaggatgactgtgggaggtggagggagaggg
gaattcactaacttgtactaggttcaaagctggcttatcctttctggtcc
agtgttagtcacaagctgcttttaagagtcctagtttttcaggcctctgc
tatgtgcaaagtaaactacgtggggcagatgctttgctgatattcttctt
gcctctcactttgtactatttggtatgatctgatgcaggggagttggctt
aactaggagccttatgaagacaccacatgtcccttgcaatcccccacaga
actggttccaagggacatttttacattagtttaaatgccagagagaaaag
agcatgatacatctctcagagttgagaacggcgtttttattaatttgggg
gcagggtaggagaattcactaacttggctttgtagaaataccttaaagta
gctaaatataactgcttttactcagacagaaataagctgtgaaatctgag
agtccttgattcagttctgctcacataaaaataaaaatcagggtctagag
agattgtgggaactaaagggggtaggggaagaaatggggagagcgaatag
cccacgtccggccagagttcttcctatgctctgggcaggcggactgacgc
tttctgggagggctgccagacattttccactcagccctgggtgggcatct
aagtcactgaccccactcaacgaggggtggacaaggggcagcccctaacc
aggggcccagagcgacaccctgtagccccagggttacaggagagagggct
gaggggagagaggttctcacacaggtgagagtctgcgcattgggtcttga
tgaacagagacagtctttgggtttagagctttattgtacaaggcaggggg
aaagagaggaagtggaaagagaaagaccggccatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_40436042_40436929
seq2: B6Ng01-220M23.g_68_954 (reverse)

seq1  GCCATGGCCGGTCTCTCTCTTTCCACTTCCTCTCCTTTCCCCCTGCCTTT  50
      |||||||||||||| |||||||||||||||||| ||||||||||||| ||
seq2  GCCATGGCCGGTCTTTCTCTTTCCACTTCCTCT-CTTTCCCCCTGCC-TT  48

seq1  CTACAATAAAGCTCTAAAACCAAAGACTGTCTCTGTTCATCAAGACCCAA  100
       ||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTACAATAAAGCTCTAAACCCAAAGACTGTCTCTGTTCATCAAGACCCAA  98

seq1  TGCGCAGACTCTCACCTGTGTGAGAACCTCTCT-CCCTCAGCCCTCTCTC  149
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCGCAGACTCTCACCTGTGTGAGAACCTCTCTCCCCTCAGCCCTCTCTC  148

seq1  CTGTAACCCTGGGGCTACAGGGTGTCGCTCTGGGCCCCTGGTTAGGGGCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACCCTGGGGCTACAGGGTGTCGCTCTGGGCCCCTGGTTAGGGGCT  198

seq1  GCCCCTTGTCCACCCCTCGTTGAGTGGGGTCAGTGACTTAGATGCCCACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTGTCCACCCCTCGTTGAGTGGGGTCAGTGACTTAGATGCCCACC  248

seq1  CAGGGCTGAGTGGAAAATGTCTGGCAGCCCTCCCAGAAAGCGTCAGTCCG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTGAGTGGAAAATGTCTGGCAGCCCTCCCAGAAAGCGTCAGTCCG  298

seq1  CCTGCCCAGAGCATAGGAAGAACTCTGGCCGGACGTGGGCTATTCGCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCAGAGCATAGGAAGAACTCTGGCCGGACGTGGGCTATTCGCTCT  348

seq1  CCCCATTTCTTCCCCTACCCCCTTTAGTTCCCACAATCTCTCTAGACCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTCTTCCCCTACCCCCTTTAGTTCCCACAATCTCTCTAGACCCT  398

seq1  GATTTTTATTTTTATGTGAGCAGAACTGAATCAAGGACTCTCAGATTTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTATTTTTATGTGAGCAGAACTGAATCAAGGACTCTCAGATTTCA  448

seq1  CAGCTTATTTCTGTCTGAGTAAAAGCAGTTATATTTAGCTACTTTAAGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTATTTCTGTCTGAGTAAAAGCAGTTATATTTAGCTACTTTAAGGT  498

seq1  ATTTCTACAAAGCCAAGTTAGTGAATTCTCCTACCCTGCCCCCAAATTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTACAAAGCCAAGTTAGTGAATTCTCCTACCCTGCCCCCAAATTAA  548

seq1  TAAAAACGCCGTTCTCAACTCTGAGAGATGTATCATGCTCTTTTCTCTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACGCCGTTCTCAACTCTGAGAGATGTATCATGCTCTTTTCTCTCT  598

seq1  GGCATTTAAACTAATGTAAAAATGTCCCTTGGAACCAGTTCTGTGGGGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTAAACTAATGTAAAAATGTCCCTTGGAACCAGTTCTGTGGGGGA  648

seq1  TTGCAAGGGACATGTGGTGTCTTCATAAGGCTCCTAGTTAAGCCAACTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGGGACATGTGGTGTCTTCATAAGGCTCCTAGTTAAGCCAACTCC  698

seq1  CCTGCATCAGATCATACCAAATAGTACAAAGTGAGAGGCAAGAAGAATAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATCAGATCATACCAAATAGTACAAAGTGAGAGGCAAGAAGAATAT  748

seq1  CAGCAAAGCATCTGCCCCACGTAGTTTACTTTGCACATAGCAGAGGCCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAGCATCTGCCCCACGTAGTTTACTTTGCACATAGCAGAGGCCTG  798

seq1  AAAAACTAGGACTCTTAAAAGCAGCTTGTGACTAACACTGGACCAGAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTAGGACTCTTAAAAGCAGCTTGTGACTAACACTGGACCAGAAAG  848

seq1  GATAAGCCAGCTTTGAACCTAGTACAAGTTAGTGAATTC  888
      |||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCCAGCTTTGAACCTAGTACAAGTTAGTGAATTC  887