BAC Information

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BAC

Clone NameB6Ng01-221C21
Chromosome10 (Build37)
Map Location 109,665,203 - 109,665,737
singlet/doubletsinglet
Overlap geneLOC100042506
Upstream geneNav3, LOC100042497, LOC100042502
Downstream geneLOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221C21.g
ACCGA036540
length531
definitionB6Ng01-221C21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctgatctttccttaacttttatcatgaatgggtgttggatcttgtcaaat
gctttttctgcatctaacgagatgatcatgtggtttttgtctttgagttt
gtttatatagtggattacagtgatggattttcgtatattaaaccatccct
gcatccctggaatgaaacctacttggtcaggatggatgattgctttaatg
tgttcttggattcggttagtgagaattttattgaggatttttgcatcgat
attcataagagaaattggtctgaagttctctatctttgttggatctttct
gtggtttaggtatcagagtaatagtggcttcataaaatgagttgggtaga
gtactttcttcttctatcttgtgaaaaagtttgtgcagaactggaattag
atcttctttgaaggtctgatagaactctgcactaaacctgtctggtcctg
ggctttttttggctgggagactattttataactgcttctatttctttagg
gtatatggttactgtttataatgtcaacttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109665203_109665737
seq2: B6Ng01-221C21.g_67_603 (reverse)

seq1  CAAGTTGACCTTCTAAACAGT-CCCATATCCCCTAAAGAAATAGAAGCAG  49
      ||||||||| || ||||||||  |||||| ||||||||||||||||||||
seq2  CAAGTTGACATTATAAACAGTAACCATATACCCTAAAGAAATAGAAGCAG  50

seq1  TTAT-AAATAGTCTCCCAGTCAAAAAAAGCCCAGGACCAGACTGGTTTAG  98
      |||| |||||||||||||| |||||||||||||||||||||| |||||||
seq2  TTATAAAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGACAGGTTTAG  100

seq1  TGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACA  150

seq1  AACTTTTTCACAAGATAGAAGTAGAAAGTACTCTACCCAACTCATTTTAT  198
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AACTTTTTCACAAGATAGAAGAAGAAAGTACTCTACCCAACTCATTTTAT  200

seq1  GAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGAT  250

seq1  AGAGAACTTCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTTCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCA  300

seq1  ATAAAATTCTCGCTAACCGAATCCAAGAACATATTAAAGCAATCATCCAT  348
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  ATAAAATTCTCACTAACCGAATCCAAGAACACATTAAAGCAATCATCCAT  350

seq1  CCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACG  398
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTGACCAAGTAGGTTTCATTCCAGGGATGCAGGGATGGTTTAATATACG  400

seq1  AAAATCCATCAATGTAATCCACTATATAAACAAACTCAAAGACAAAAACC  448
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCATCACTGTAATCCACTATATAAACAAACTCAAAGACAAAAACC  450

seq1  ACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACAC  500

seq1  CCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  535
      ||||||||||||||||||  |||||||||||||||||
seq2  CCATTCATGATAAAAGTTAAGGAAAGATCAGGAATTC  537