BAC Information

Click to search

BAC

Clone NameB6Ng01-221K09
Chromosome10 (Build37)
Map Location 129,230,765 - 129,231,863
singlet/doubletsinglet
Overlap genenone
Upstream geneMmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810
Downstream geneOlfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221K09.bB6Ng01-221K09.g
ACCGA036882GA036883
length1,09866
definitionB6Ng01-221K09.b B6Ng01-221K09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagaggagaagagggcctgagctcaagtaagcattatggtagg
acagttaaatgtgaagaattagatcaccttcttcaagtatgcctgtgcat
ctatttctttaaggtaatcttcttatgcttcaagtaagtatctatatttt
tgagatttttgatgaaattattttgaatttaagcatcaaaataattaatg
ttggctaaattaaaatataataattcctgccatgtctattgtaaattgta
tttctttaagcatcatgatatttttattcaacattttgaattttactcaa
gaagaaaagaagatgaaagcagaccatggaataatgataatttaaaaatg
aaagccttttttatattaatttgatactcatgattgataatataattaga
tgaagtttcattcagattcaatttctagcctaaactttattttgacatag
taggtccaggaatagtttttgaatgcaactgttgaagttcaactaaagta
tcctcttaagtgtttaatttctaatttttgtgttttagctgtccttgttg
tcctgaggctatttgtgtaaatctgggaactttgtaaggagtatcttcac
aatcacctgaatataaaaggaatgccccacagaaataacatttccttgcc
tttgttattgtggatgcatcaactctgctccttgttccaaaggacatgat
gttctcacatcacattctttctgtttggatttcttcctcttctttggagt
atctttttttaattttacatctatgataatgtcttgatttcttttccttg
aaacatctcttgatattattaaaaagtagtttaatttgtcactgaatacc
tattagtatttatattagtattagaatattttatttgttagtattaatgc
atattagagattgtaagtgatcatccttgatagcctttaaaatttttttc
tttcttaatttttagttatccatttgttacatctcaaacgaatatcacac
ttctcagttaccccctcctccaaccgccccatcccatgaatatcccacat
cccaggtatcctttggcaccccccccacaatctcaatagtctagaaag
ttggtcagggaagcagaagtgtgttggttagtgagcaggggaagggagga
tgggatggggtgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129230765_129231863
seq2: B6Ng01-221K09.b_52_1149 (reverse)

seq1  CTTTCTTAAGACTATTGAGA-TGTGGGGGGGGTGGCAAAGGGATAACTGG  49
      ||||||  |||||||||||| ||||||||||||| |||| ||||| ||||
seq2  CTTTCT--AGACTATTGAGATTGTGGGGGGGGTGCCAAA-GGATACCTGG  47

seq1  GATGTGGGATA-TCATGGGATGGGGCGGTTGGAGGAGGGGGTAACTGAGA  98
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGGATATTCATGGGATGGGGCGGTTGGAGGAGGGGGTAACTGAGA  97

seq1  AGTGTGATA-TCGTTTGAGATGTAAACAAATGGAATAACTAAAAATAAAG  147
      ||||||||| ||||||||||||| ||||||||| |||||||||||| |||
seq2  AGTGTGATATTCGTTTGAGATGT-AACAAATGG-ATAACTAAAAATTAAG  145

seq1  AAAGAAAAAAAATTTAAAAGACTATCAA-GATGATCACTTACAATCTCTA  196
      |||| |||||||||| |||| ||||||| |||||||||||||||||||| 
seq2  AAAG-AAAAAAATTTTAAAGGCTATCAAGGATGATCACTTACAATCTCT-  193

seq1  AATATGCATTAATACTAACAAAT-AAATATTCTAATACTAATATAAATAC  245
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATATGCATTAATACTAACAAATAAAATATTCTAATACTAATATAAATAC  243

seq1  TAATAGGTATTCAGTGACAAATTAAACTACTTTTTAATAATATCAAGAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGTATTCAGTGACAAATTAAACTACTTTTTAATAATATCAAGAGA  293

seq1  TGTTTCAAGGAAAAGAAATCAAGACATTATCATAGATGTAAAATTAAAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAGGAAAAGAAATCAAGACATTATCATAGATGTAAAATTAAAAA  343

seq1  AAGATACTCC-AAGAAGAGGAAGAAATCCAAACAGAAAGAATGTGATGTG  394
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAGATACTCCAAAGAAGAGGAAGAAATCCAAACAGAAAGAATGTGATGTG  393

seq1  AGAACATCATGTCCTTTGGAACAAGGAGCAGAGTTGATGCATCCACAATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATCATGTCCTTTGGAACAAGGAGCAGAGTTGATGCATCCACAATA  443

seq1  ACAAAGGCAAGGAAATGTTATTTCTGTGGGGCATTCCTTTTATATTCAGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGCAAGGAAATGTTATTTCTGTGGGGCATTCCTTTTATATTCAGG  493

seq1  TGATTGTGAAGATACTCCTTACAAAGTTCCCAGATTTACACAAATAGCCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTGAAGATACTCCTTACAAAGTTCCCAGATTTACACAAATAGCCT  543

seq1  CAGGACAACAAGGACAGCTAAAACACAAAAATTAGAAATTAAACACTTAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAACAAGGACAGCTAAAACACAAAAATTAGAAATTAAACACTTAA  593

seq1  GAGGATACTTTAGTTGAACTTCAACAGTTGCATTCAAAAACTATTCCTGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATACTTTAGTTGAACTTCAACAGTTGCATTCAAAAACTATTCCTGG  643

seq1  ACCTACTATGTCAAAATAAAGTTTAGGCTAGAAATTGAATCTGAATGAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTATGTCAAAATAAAGTTTAGGCTAGAAATTGAATCTGAATGAAA  693

seq1  CTTCATCTAATTATATTATCAATCATGAGTATCAAATTAATATAAAAAAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTAATTATATTATCAATCATGAGTATCAAATTAATATAAAAAAG  743

seq1  GCTTTCATTTTTAAATTATCATTATTCCATGGTCTGCTTTCATCTTCTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCATTTTTAAATTATCATTATTCCATGGTCTGCTTTCATCTTCTTT  793

seq1  TCTTCTTGAGTAAAATTCAAAATGTTGAATAAAAATATCATGATGCTTAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGAGTAAAATTCAAAATGTTGAATAAAAATATCATGATGCTTAA  843

seq1  AGAAATACAATTTACAATAGACATGGCAGGAATTATTATATTTTAATTTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACAATTTACAATAGACATGGCAGGAATTATTATATTTTAATTTA  893

seq1  GCCAACATTAATTATTTTGATGCTTAAATTCAAAATAATTTCATCAAAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACATTAATTATTTTGATGCTTAAATTCAAAATAATTTCATCAAAAA  943

seq1  TCTCAAAAATATAGATACTTACTTGAAGCATAAGAAGATTACCTTAAAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAATATAGATACTTACTTGAAGCATAAGAAGATTACCTTAAAGA  993

seq1  AATAGATGCACAGGCATACTTGAAGAAGGTGATCTAATTCTTCACATTTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGCACAGGCATACTTGAAGAAGGTGATCTAATTCTTCACATTTA  1043

seq1  ACTGTCCTACCATAATGCTTACTTGAGCTCAGGCCCTCTTCTCCTCTCTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTACCATAATGCTTACTTGAGCTCAGGCCCTCTTCTCCTCTCTG  1093

seq1  AATTC  1099
      |||||
seq2  AATTC  1098