BAC Information

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BAC

Clone NameB6Ng01-222P23
Chromosome10 (Build37)
Map Location 12,150,199 - 12,332,163
singlet/doubletdoublet
Overlap geneUtrn
Upstream geneEpm2a, EG666732, LOC100039343
Downstream geneLOC665172, Stx11, Sf3b5, Plagl1, 4930519B02Rik, Ltv1, LOC666829, Phactr2, LOC100039475, Fuca2, Pex3, Deadc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222P23.bB6Ng01-222P23.g
ACCGA037862GA037863
length939970
definitionB6Ng01-222P23.b B6Ng01-222P23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,331,235 - 12,332,163)(12,150,199 - 12,151,152)
sequence
gaattctctttatttaaattgcaaatgttgttacagctatttccccctat
atcccttacattctctaaatttagtcttttagaaaggaaatgttaaatac
ttcagtgttttgccataaaaaatacagaaagtctatatttcaagtacatt
taaagacgagagagagagagagagaaagagagagagagagagagagagag
agagagagagagaagagaagagtctattttgcgttcatcttggcattttg
aaaactggtgtctgaatatttgtaccctcttcatctttcacatctttctt
ttgtctgttgtatgggtatcagtcatttataagtaagtgaaaaacgactg
gaaaattgtgcacagtattcttattttgagttttatttatttgtatgtat
ttccccctgcctatttctcatagggaaagggacagggatgggcagaactt
ggggaaactgtggctctgagtaacccccctccaactgtacatggtgttgt
attttttgcttttaaaggtgtttctttctggttatacaatccctaaaatt
tgggcaggaaacagaaacacattggctgctgacttgagaagcagcagcat
tgaaattgccctgatgacctcgagccaccccacgctagatgctaatttct
cctgatttggcttagatcacttagcttctttaaaatattaatgactctag
aggataatttttcctctattagagcacagtgggacacaaagctggatgta
agtgacttttaagattgctactgacttttaacttgttttgcattttgtga
tttatcttgggcctgttttcagtctttgaatttgaaacctgattgaggtt
atgttgagttagagaggaattttcataattccccccccacccccaccctc
tcagaggacatttttaattggcatattttattaattgac
gaattcttcccatttttgacaacacagatggacctgagtgaaatgattca
gatatacaaagaaaaatattgcatggtctcatttatacaaagaatgtaaa
taagtgaggagttaagctgagagtggagagggtagaatggtgattctcaa
atctggagagaggttcaaaaatagaaagccatccaaactgtcagttgtaa
caagagtgagttcctgagtctccatagatagcactgtagctatagttaag
agtgtatgttgggtctggtagggcagccctgtagttctagattctcagaa
ggctgaggttggcagacagcaagttcaaggtcaagctatgcaattttgaa
accctatctcaaaataaaaatgccttttaaaagatctgggatggagctca
gaagaaaagtggtttcctagcacgtgtgagaccgtgagattggtccccag
taatgccaataccaaaatcaaaacccagtctaacaaaaatgttgtatgga
tgaaatagtaaaataactttttttaaaaaaagaactttcaaattctctaa
ttacatgaatgatttttctaattcaaattaaattttggttatttacagca
gcaattatttaaaggagactgaattttcattacagagacaaatgatttta
ttttttagatgtgctgggaatttttatctgaaggcaacagtgtttaaaag
tagaatccttaaagagtgaattacatcatagataccattaaggatggatt
tgatcacaagagctacttttttagcagtgaagattcccgatagagaatgt
gttcagatccttcccctctctttcacacaggagctgtcttgccccttcta
ttttctacccatgtaatgatgcaagagattttcttggcccccatgaaggt
ctcttccaacttagactttcttcactttttagaaacaagcccaagtaaga
agtcttgttccattacacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_12331235_12332163
seq2: B6Ng01-222P23.b_44_982 (reverse)

seq1  GTCAATT-ATTAAATATGCC-ATTAAAAATGTCC-CTGAGGGGGTGGGGG  47
      ||||||| || ||||||||| ||||||||||||| ||||| |||||||||
seq2  GTCAATTAATAAAATATGCCAATTAAAAATGTCCTCTGAGAGGGTGGGGG  50

seq1  TGGGGGTGGGATTAT-AAAATTCCTCTCTAACTCAACATAACCTCAATCA  96
      |||||| || ||||| ||||||||||||||||||||||||||||||||||
seq2  TGGGGGGGGAATTATGAAAATTCCTCTCTAACTCAACATAACCTCAATCA  100

seq1  GGTTTC-AATTCAAAGACTGAAAACAGG-CCAAGAT-AATCACAAAATGC  143
      |||||| ||||||||||||||||||||| ||||||| |||||||||||||
seq2  GGTTTCAAATTCAAAGACTGAAAACAGGCCCAAGATAAATCACAAAATGC  150

seq1  -AAACAAGTT-AAAGTCAGTAGCAATCTTAAAAGTCACTTACATCCAGCT  191
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGTTAAAAGTCAGTAGCAATCTTAAAAGTCACTTACATCCAGCT  200

seq1  TTGTGT-CCACTGTGCTCTAATAGAGGAAAAATTATCCTCTAGAGTCATT  240
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCCACTGTGCTCTAATAGAGGAAAAATTATCCTCTAGAGTCATT  250

seq1  AATATTTTAAAGAAGCTAAGTGATCTAAGCCAAATCAGGAGAAATTAGCA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTAAAGAAGCTAAGTGATCTAAGCCAAATCAGGAGAAATTAGCA  300

seq1  TCTAGCGTGGGGTGGCTCGAGGTCATCAGGGCAATTTCAATGCTGCTGCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCGTGGGGTGGCTCGAGGTCATCAGGGCAATTTCAATGCTGCTGCT  350

seq1  TCTCAAGTCAGCAGCCAATGTGTTTCTGTTTCCTGCCCAAATTTTAGGGA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGTCAGCAGCCAATGTGTTTCTGTTTCCTGCCCAAATTTTAGGGA  400

seq1  TTGTATAACCAGAAAGAAACACCTTTAAAAGCAAAAAATACAACACCATG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAACCAGAAAGAAACACCTTTAAAAGCAAAAAATACAACACCATG  450

seq1  TACAGTTGGAGGGGGGTTACTCAGAGCCACAGTTTCCCCAAGTTCTGCCC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGGAGGGGGGTTACTCAGAGCCACAGTTTCCCCAAGTTCTGCCC  500

seq1  ATCCCTGTCCCTTTCCCTATGAGAAATAGGCAGGGGGAAATACATACAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGTCCCTTTCCCTATGAGAAATAGGCAGGGGGAAATACATACAAA  550

seq1  TAAATAAAACTCAAAATAAGAATACTGTGCACAATTTTCCAGTCGTTTTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAACTCAAAATAAGAATACTGTGCACAATTTTCCAGTCGTTTTT  600

seq1  CACTTACTTATAAATGACTGATACCCATACAACAGACAAAAGAAAGATGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACTTATAAATGACTGATACCCATACAACAGACAAAAGAAAGATGT  650

seq1  GAAAGATGAAGAGGGTACAAATATTCAGACACCAGTTTTCAAAATGCCAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGAAGAGGGTACAAATATTCAGACACCAGTTTTCAAAATGCCAA  700

seq1  GATGAACGCAAAATAGACTCTTCTCTTCTCTCTCTCTCTCTCTCTCTCTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACGCAAAATAGACTCTTCTCTTCTCTCTCTCTCTCTCTCTCTCTC  750

seq1  TCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCGTCTTTAAATGTACTTGA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCGTCTTTAAATGTACTTGA  800

seq1  AATATAGACTTTCTGTATTTTTTATGGCAAAACACTGAAGTATTTAACAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGACTTTCTGTATTTTTTATGGCAAAACACTGAAGTATTTAACAT  850

seq1  TTCCTTTCTAAAAGACTAAATTTAGAGAATGTAAGGGATATAGGGGGAAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTAAAAGACTAAATTTAGAGAATGTAAGGGATATAGGGGGAAA  900

seq1  TAGCTGTAACAACATTTGCAATTTAAATAAAGAGAATTC  929
      |||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTAACAACATTTGCAATTTAAATAAAGAGAATTC  939

seq1: chr10_12150199_12151152
seq2: B6Ng01-222P23.g_70_1039

seq1  GAATTCTTCCCATTTTTGACAACACAGATGGACCTGAGTGAAATGATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCATTTTTGACAACACAGATGGACCTGAGTGAAATGATTCA  50

seq1  GATATACAAAGAAAAATATTGCATGGTCTCATTTATACAAAGAATGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACAAAGAAAAATATTGCATGGTCTCATTTATACAAAGAATGTAAA  100

seq1  TAAGTGAGGAGTTAAGCTGAGAGTGGAGAGGGTAGAATGGTGATTCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAGGAGTTAAGCTGAGAGTGGAGAGGGTAGAATGGTGATTCTCAA  150

seq1  ATCTGGAGAGAGGTTCAAAAATAGAAAGCCATCCAAACTGTCAGTTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAGAGAGGTTCAAAAATAGAAAGCCATCCAAACTGTCAGTTGTAA  200

seq1  CAAGAGTGAGTTCCTGAGTCTCCATAGATAGCACTGTAGCTATAGTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGAGTTCCTGAGTCTCCATAGATAGCACTGTAGCTATAGTTAAG  250

seq1  AGTGTATGTTGGGTCTGGTAGGGCAGCCCTGTAGTTCTAGATTCTCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGTTGGGTCTGGTAGGGCAGCCCTGTAGTTCTAGATTCTCAGAA  300

seq1  GGCTGAGGTTGGCAGACAGCAAGTTCAAGGTCAAGCTATGCAATTTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGTTGGCAGACAGCAAGTTCAAGGTCAAGCTATGCAATTTTGAA  350

seq1  ACCCTATCTCAAAATAAAAATGCCTTTTAAAAGATCTGGGATGGAGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATCTCAAAATAAAAATGCCTTTTAAAAGATCTGGGATGGAGCTCA  400

seq1  GAAGAAAAGTGGTTTCCTAGCACGTGTGAGACCGTGAGATTGGTCCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAGTGGTTTCCTAGCACGTGTGAGACCGTGAGATTGGTCCCCAG  450

seq1  TAATGCCAATACCAAAATCAAAACCCAGTCTAACAAAAATGTTGTATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCAATACCAAAATCAAAACCCAGTCTAACAAAAATGTTGTATGGA  500

seq1  TGAAATAGTAAAATAACTTTTTTTAAAAAAAGAACTTTCAAATTCTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGTAAAATAACTTTTTTTAAAAAAAGAACTTTCAAATTCTCTAA  550

seq1  TTACATGAATGATTTTTCTAATTCAAATTAAATTTTGGTTATTTACAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGAATGATTTTTCTAATTCAAATTAAATTTTGGTTATTTACAGCA  600

seq1  GCAATTATTTAAAGGAGACTGAATTTTCATTACAGAGACAAATGATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTATTTAAAGGAGACTGAATTTTCATTACAGAGACAAATGATTTTA  650

seq1  TTTTTTAGATGTGCTGGGAA-TTTTATCTGAAGGCAACAGTGTTTAAAAG  699
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTTTTAGATGTGCTGGGAATTTTTATCTGAAGGCAACAGTGTTTAAAAG  700

seq1  TAGAATCCTT-AAGAGTGAATTACATCATAGATACCATTAAGGATGGATT  748
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCCTTAAAGAGTGAATTACATCATAGATACCATTAAGGATGGATT  750

seq1  TGATCACAAGAGCTAC-TTTTTAGCAGTGAAGATTCCCGATAGAGAATGT  797
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGATCACAAGAGCTACTTTTTTAGCAGTGAAGATTCCCGATAGAGAATGT  800

seq1  GTTCAGATCCTTCCCCTCTCTTTCACACAGGAGCTGTCTTG-CCCTTCTA  846
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTTCAGATCCTTCCCCTCTCTTTCACACAGGAGCTGTCTTGCCCCTTCTA  850

seq1  TTTTCTA-CCATGTAATGATGCAAGAGA-TTTCT--GGCCCCATG-AGGT  891
      ||||||| |||||||||||||||||||| |||||  | ||||||| ||||
seq2  TTTTCTACCCATGTAATGATGCAAGAGATTTTCTTGGCCCCCATGAAGGT  900

seq1  CCCTTCCAACTTAGAC-TTCCTCAC-TTTTAGAAACA--GCCAAGTAAG-  936
      | |||||||||||||| ||| |||| |||||||||||   ||||||||| 
seq2  CTCTTCCAACTTAGACTTTCTTCACTTTTTAGAAACAAGCCCAAGTAAGA  950

seq1  AGTC-TGTT-CATTACACAT  954
      |||| |||| ||||||||||
seq2  AGTCTTGTTCCATTACACAT  970