BAC Information

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BAC

Clone NameB6Ng01-223G17
Chromosome10 (Build37)
Map Location 51,183,078 - 51,183,941
singlet/doubletsinglet
Overlap geneLOC100041768
Upstream geneLOC629652, Ascc3, Sim1, LOC268300
Downstream geneGp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1, Gopc, LOC625811, EG668294, Nepn, D10Ertd438e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223G17.bB6Ng01-223G17.g
ACCGA038167GA038168
length1,0621,184
definitionB6Ng01-223G17.b B6Ng01-223G17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttgtttgaggcttgtcacagctggagaaagatttaacatgaa
gatatatggtatacaaaagagaaaaaaagcattgtatgtagttccaggga
ctagaaaataaatacaaggtttcatggtgggatttcaagaaaataaagtg
ctcatgttagagaacaactgtcagagaacataccaggatgaagtgaaggg
tgaaatgagtgaaaagggaaaggtctggctgagtgggtggaaagcccttt
tcccaccaaattaaagttattttcattcttcttactgtggaattttattg
tgcaatatatcaccttttttatctcataacataggggaatatttttcaaa
cttaaccaggggtgggtctgccacagacccttttggtccctgtctgcgta
gaatgggtctctggctgcaggtggacaaggagtcggagaatgaatgacag
acagaatcacacgaaagattgtgtagaatctgaatgtaatttttcaagat
gagcatcatactttttatacagaagagcgacaagaaaccaggtgacatac
atccgctgagttacagtgacacaataccaaaggaatgtatacatcaaaag
aaggtggggaccagtcgactgccactaagaagggagtctattgttaagcc
caccaccaggggttcttagtaaatgcctgagtaatgctgtttctttgggc
ctagtgaagaaacttctctcaaggggattccctagcgctttcatggtaaa
tccacctattcgctaggccattgtgtattcccttgtttgggtgagactgg
ctactgtcctaagtaatcacactgaagatcagccttgagctattccagct
ccattctttgtaatgcctaattagtttcactgtctctactagaagtaaat
ttgaatgttactgaatagttaatcttctcaccgaattcctactgaattgc
aagtttgttggctttaaggattttctaggatgttggaacactggcgaaag
cttagctatgtcagaatttcaattcttttagaggcacttataataaaaca
atacttaaaaga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgtggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactacctgaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaataacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaataatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaacatgtactcactgataagtggatattagcccaaaacct
aggatacccaagatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacgctatgcccctccttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
cggatggaccatgtaaagactgccatatccaaggatccactccataatca
gcatccaaatgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgtcgggccctagcaaaca
cagaagtggatgctcaacgtcagctaatggatggatcacaggctcccaat
ggaggagctagagaaagtacccagagctaagggatctgcaaccctatagt
ggaacacatatgactaaccagtacccggagctctgacctctagctgcata
tatatcaaaagatggcctagtcgccatcacttgaagaagaggtcattgga
catgccaactttatatgccccagtacgtaacgcaaggtctaaatggaatt
gtattggctgaagtggcatctaacactacagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_51183078_51183941
seq2: B6Ng01-223G17.b_45_908

seq1  GAATTCTGTTGTTTGAGGCTTGTCACAGCTGGAGAAAGATTTAACATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGTTTGAGGCTTGTCACAGCTGGAGAAAGATTTAACATGAA  50

seq1  GATATATGGTATACAAAAGAGAAAAAAAGCATTGTATGTAGTTCCAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGGTATACAAAAGAGAAAAAAAGCATTGTATGTAGTTCCAGGGA  100

seq1  CTAGAAAATAAATACAAGGTTTCATGGTGGGATTTCAAGAAAATAAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAATAAATACAAGGTTTCATGGTGGGATTTCAAGAAAATAAAGTG  150

seq1  CTCATGTTAGAGAACAACTGTCAGAGAACATACCAGGATGAAGTGAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTAGAGAACAACTGTCAGAGAACATACCAGGATGAAGTGAAGGG  200

seq1  TGAAATGAGTGAAAAGGGAAAGGTCTGGCTGAGTGGGTGGAAAGCCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAGTGAAAAGGGAAAGGTCTGGCTGAGTGGGTGGAAAGCCCTTT  250

seq1  TCCCACCAAATTAAAGTTATTTTCATTCTTCTTACTGTGGAATTTTATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCAAATTAAAGTTATTTTCATTCTTCTTACTGTGGAATTTTATTG  300

seq1  TGCAATATATCACCTTTTTTATCTCATAACATAGGGGAATATTTTTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATATCACCTTTTTTATCTCATAACATAGGGGAATATTTTTCAAA  350

seq1  CTTAACCAGGGGTGGGTCTGCCACAGACCCTTTTGGTCCCTGTCTGCGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCAGGGGTGGGTCTGCCACAGACCCTTTTGGTCCCTGTCTGCGTA  400

seq1  GAATGGGTCTCTGGCTGCAGGTGGACAAGGAGTCGGAGAATGAATGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTCTCTGGCTGCAGGTGGACAAGGAGTCGGAGAATGAATGACAG  450

seq1  ACAGAATCACACGAAAGATTGTGTAGAATCTGAATGTAATTTTTCAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATCACACGAAAGATTGTGTAGAATCTGAATGTAATTTTTCAAGAT  500

seq1  GAGCATCATACTTTTTATACAGAAGAGCGACAAGAAACCAGGTGACATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCATACTTTTTATACAGAAGAGCGACAAGAAACCAGGTGACATAC  550

seq1  ATCCGCTGAGTTACAGTGACACAATACCAAAGGAATGTATACATCAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGCTGAGTTACAGTGACACAATACCAAAGGAATGTATACATCAAAAG  600

seq1  AAGGTGGGGACCAGTCGACTGCCACTAAGAAGGGAGTCTATTGTTAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGGGACCAGTCGACTGCCACTAAGAAGGGAGTCTATTGTTAAGCC  650

seq1  CACCACCAGGGGTTCTTAGTAAATGCCTGAGTAATGCTGTTTCTTTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCAGGGGTTCTTAGTAAATGCCTGAGTAATGCTGTTTCTTTGGGC  700

seq1  CTAGTGAAGAAACTTCTCTCAAGGGGATTCCCTAGCGCTTTCATGGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGAAGAAACTTCTCTCAAGGGGATTCCCTAGCGCTTTCATGGTAAA  750

seq1  TCCACCTATTCGCTAGGCCATTGTGTATTCCCTTGTTTGGGTGAGACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTATTCGCTAGGCCATTGTGTATTCCCTTGTTTGGGTGAGACTGG  800

seq1  CTACTGTCCTAAGTAATCACACTGAAGATCAGCCTTGAGCTATTCCAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTCCTAAGTAATCACACTGAAGATCAGCCTTGAGCTATTCCAGCT  850

seq1  CCATTCTTTGTAAT  864
      ||||||||||||||
seq2  CCATTCTTTGTAAT  864