BAC Information

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BAC

Clone NameB6Ng01-223M07
Chromosome10 (Build37)
Map Location 67,348,368 - 67,517,320
singlet/doubletdoublet
Overlap geneZfp365, Plekhk1
Upstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618
Downstream geneArid5b, LOC100040136, 1700040L02Rik, EG665342, Tmem26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223M07.bB6Ng01-223M07.g
ACCGA038417GA038418
length692852
definitionB6Ng01-223M07.b B6Ng01-223M07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,516,630 - 67,517,320)(67,348,368 - 67,349,217)
sequence
gaattcactgtgtagaccaggctggattcgaactcacattaggcccacct
gcctctgtctctggagtgcttggccctgcagttctccttcacctaagtaa
gtactcagtgctgttttcacctccacttctaggaaggcttccgtgaaatg
aaatacggagtgactctcattcacttgattcacgttgaaaaccaaactga
gtgttctcagtgcctatccaacacacacaggaagtttgggggggggggct
gagcaggccttgagataaactgatcaaataatctgagttaccacaaaaat
gagtaaatgggtgctcctgtgggcagaacaccatgagtttcagaatagta
aaaggtgcggtaataaagacccgtttctgcttcttacctggaggcagttt
gatctgtcactcttcattaagtatgccatggagtgagcatctctcccccc
aaacagccttaattttagcattcctgcccgtgtctcttgtcaaatgagat
ttctgtaacctttgatttgtatcaagatttacttgactttagtcttcaaa
gcattcaattcaaagttcaccctatcagtgggtggattagctagctgagt
atctgaaatatcactgttgaatgtcataatggtttgttatatttgttatt
ctctctctctctctctctctctctctctctctctctctctct
gaattcactgagttcccatagttccatgcttcgtagaaaaccagcggttg
agtgcttcctctctctgaagcctgctcttagtacagcggcaaggatgtgc
agcagccacaggctggggtgggtacgctaggacatctgtttatggtttcc
gctaagagttgacaagataaaactaaagtgttgggaaaattacacatagt
catcgaggaagacagggaagatgtggagagggcttttaatgagcctccct
gggtgtgaacatatgttaaaaagaatatttagatagaggtattagaaagt
atgaaaataaatgagccagttttcctgaaggctgattggtgtacaagggc
atgctcattatgtacaaaaggaacagtttatttgtgaagcatagttttgt
ttgctgttagtggagcaataaatgtgactttcaaaaaaaaacaaaaaaaa
caaaacacttgacctagaaggaacagaccaaagtgttagtcagaaatata
gctttattatcatagtatttcataatctaaaaacttctctttttttccat
cctgggaacagaaatactctaacatctatacatttgactggccctgcagc
atactggaatacagcttccaagcaagccgcacttacacataagaatctgt
tatagtttggggagagggtggggcattgacacaacagttcaaatgaagat
cttttccccttacaaaataaataataaaattcaatgtatacctcagttaa
ttcttgataacagttttcccagaaactttggtgatttgtttaaaaagtca
ctgcttcaaatctaaggtcgatttgcctgaggggactcgagagcgtgtgt
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67516630_67517320
seq2: B6Ng01-223M07.b_49_740 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACAA  50

seq1  ATATAACAAACCATTATGACATTCAACAGTGATATTTCAGATACTCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACAAACCATTATGACATTCAACAGTGATATTTCAGATACTCAGCT  100

seq1  AGCTAATCCACCCACTGATAGGGTGAACTTTGAATTGAATGCTTTGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATCCACCCACTGATAGGGTGAACTTTGAATTGAATGCTTTGAAGA  150

seq1  CTAAAGTCAAGTAAATCTTGATACAAATCAAAGGTTACAGAAATCTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTCAAGTAAATCTTGATACAAATCAAAGGTTACAGAAATCTCATT  200

seq1  TGACAAGAGACACGGGCAGGAATGCTAAAATTAAGGCTGTTTGGGGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGAGACACGGGCAGGAATGCTAAAATTAAGGCTGTTTGGGGGGAG  250

seq1  AGATGCTCACTCCATGGCATACTTAATGAAGAGTGACAGATCAAACTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCACTCCATGGCATACTTAATGAAGAGTGACAGATCAAACTGCC  300

seq1  TCCAGGTAAGAAGCAGAAACGGGTCTTTATTACCGCACCTTTTACTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTAAGAAGCAGAAACGGGTCTTTATTACCGCACCTTTTACTATTC  350

seq1  TGAAACTCATGGTGTTCTGCCCACAGGAGCACCCATTTACTCATTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCATGGTGTTCTGCCCACAGGAGCACCCATTTACTCATTTTTGT  400

seq1  GGTAACTCAGATTATTTGATCAGTTTATCTCAAGGCCTGCTCAGCCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACTCAGATTATTTGATCAGTTTATCTCAAGGCCTGCTCAGCCCCCC  450

seq1  CCCCCAAACTTCCTGTGTGTGTTGGATAGGCACTGAGAACACTCAGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAACTTCCTGTGTGTGTTGGATAGGCACTGAGAACACTCAGTTTG  500

seq1  GTTTTCAACGTGAATCAAGTGAATGAGAGTCACTCCGTATTTCATTTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAACGTGAATCAAGTGAATGAGAGTCACTCCGTATTTCATTTCAC  550

seq1  GGAAGCCTTCCTAGAAGTGGAGGTGAAAACAGCACTGAGTACTTACTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCTTCCTAGAAGTGGAGGTGAAAACAGCACTGAGTACTTACTTAG  600

seq1  GTGAAGGAGAACTGCAGGGCCAAGCACTCCAGAGACAGAGGCAGGTGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGAGAACTGCAGGGCCAAGCACTCCAGAGACAGAGGCAGGTGGGC  650

seq1  CT-CTGTGAGTTCGAATCCAGCCTGGTCTACACAGTGAATTC  691
      ||  ||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTGAGTTCGAATCCAGCCTGGTCTACACAGTGAATTC  692

seq1: chr10_67348368_67349217
seq2: B6Ng01-223M07.g_71_922

seq1  GAATTCACTGAGTTCCCATAGTTCCATGCTTCGTAGAAAACCAGCGGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAGTTCCCATAGTTCCATGCTTCGTAGAAAACCAGCGGTTG  50

seq1  AGTGCTTCCTCTCTCTGAAGCCTGCTCTTAGTACAGCGGCAAGGATGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCCTCTCTCTGAAGCCTGCTCTTAGTACAGCGGCAAGGATGTGC  100

seq1  AGCAGCCACAGGCTGGGGTGGGTACGCTAGGACATCTGTTTATGGTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCACAGGCTGGGGTGGGTACGCTAGGACATCTGTTTATGGTTTCC  150

seq1  GCTAAGAGTTGACAAGATAAAACTAAAGTGTTGGGAAAATTACACATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAGTTGACAAGATAAAACTAAAGTGTTGGGAAAATTACACATAGT  200

seq1  CATCGAGGAAGACAGGGAAGATGTGGAGAGGGCTTTTAATGAGCCTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGAGGAAGACAGGGAAGATGTGGAGAGGGCTTTTAATGAGCCTCCCT  250

seq1  GGGTGTGAACATATGTTAAAAAGAATATTTAGATAGAGGTATTAGAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGAACATATGTTAAAAAGAATATTTAGATAGAGGTATTAGAAAGT  300

seq1  ATGAAAATAAATGAGCCAGTTTTCCTGAAGGCTGATTGGTGTACAAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATAAATGAGCCAGTTTTCCTGAAGGCTGATTGGTGTACAAGGGC  350

seq1  ATGCTCATTATGTACAAAAGGAACAGTTTATTTGTGAAGCATAGTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATTATGTACAAAAGGAACAGTTTATTTGTGAAGCATAGTTTTGT  400

seq1  TTGCTGTTAGTGGAGCAATAAATGTGACTTTCAAAAAAAAACAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTAGTGGAGCAATAAATGTGACTTTCAAAAAAAAACAAAAAAAA  450

seq1  CAAAACACTTGACCTAGAAGGAACAGACCAAAGTGTTAGTCAGAAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACTTGACCTAGAAGGAACAGACCAAAGTGTTAGTCAGAAATATA  500

seq1  GCTTTATTATCATAGTATTTCATAATCTAAAAACTTCTCTTTTTTTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTATCATAGTATTTCATAATCTAAAAACTTCTCTTTTTTTCCAT  550

seq1  CCTGGGAACAGAAATACTCTAACATCTATACATTTGACTGGCCCTGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAACAGAAATACTCTAACATCTATACATTTGACTGGCCCTGCAGC  600

seq1  ATACTGGAATACAGCTTCCAAGCAAGCCGCACTTACACATAAGAATCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGAATACAGCTTCCAAGCAAGCCGCACTTACACATAAGAATCTGT  650

seq1  TATAGTTTGGGGAGAGGGTGGGGCATTGACACAACAGTTCAAATGAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTGGGGAGAGGGTGGGGCATTGACACAACAGTTCAAATGAAGAT  700

seq1  CTTTTCCCCTTACAAAATAAATAATAAAATTCAATGTATACCTCAGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCCTTACAAAATAAATAATAAAATTCAATGTATACCTCAGTTAA  750

seq1  TTCTTGATAACAG-TTTCCCAGAAACTTTGGTGATTTGTTTAAAAAGTCA  799
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATAACAGTTTTCCCAGAAACTTTGGTGATTTGTTTAAAAAGTCA  800

seq1  CTGCTTCAAATCTAAGGTCGA-TTGCCTGAGGGGACTCGAGAGCGTGTGT  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGCTTCAAATCTAAGGTCGATTTGCCTGAGGGGACTCGAGAGCGTGTGT  850

seq1  GT  850
      ||
seq2  GT  852