BAC Information

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BAC

Clone NameB6Ng01-225C01
Chromosome10 (Build37)
Map Location 128,327,180 - 128,484,093
singlet/doubletdoublet
Overlap geneGdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487
Upstream geneSdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik
Downstream geneOlfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225C01.bB6Ng01-225C01.g
ACCGA039399GA039400
length1,206238
definitionB6Ng01-225C01.b B6Ng01-225C01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,482,890 - 128,484,093)(128,327,180 - 128,327,417)
sequence
gaattcatccttctaggactcacggatgtccctgaacttcaggtggcagt
tttcacttttcttcttcttgcctatgtattcagcatgattggaaacctga
ccatcctcgtcctcaccctgctggattcgcaccttcacactcccatgtat
ttcttcctccggaacttctccttcctagaaatttctttcacaaacatctt
catccccagggtcctggtcagcattacaacgggaaacaagagtattagct
ttgctggctgctttgctcagtatttctttgccatctttcttggagcaaca
gagttttatctcctggctgctatgtcctatgatcgctatgtggccatatg
caaacccctgcactacatggcaatcatgagcaacagagtctgtacccatc
tggttctctgctcttggctggctgggttgatggtcattatacctcccatc
actttgatgagtcagcagaacttctgtgcatccaacaggctaaatcatta
tttctgtgactttgagcctcttcgaaaactctcctgttctgacacaagcc
tcattgaaaaagttgtctttctcgtggcatctgtgaccctggtggtgact
ctaatgctggtaactctctcctatacattcatcatcaagacaattctcaa
gctcccttcagcccaacaaaggacaaaggctttttccacgtgttcttccc
acatgattgttatctccctctcttatgggagctgcttcttcatatatgtt
aagccttcagcaaaagtagggggcacattcgataaaggagtagccctttt
cattacttcagttgctcctttattgaatcccttcatttataccctaagga
accaacaggtgaagcaagcattcaaagatacaatcaaaaagcttgtgaat
ctttaaagaattcaagaactgaactcttaatgaatgagttcctactgtgt
gccaagctctctctcactgactaggtacccaattaagagattgactctag
tgtgaaagttgaagaacacatttcagccttattgagtgtaatgtatgatc
taaataaagattttaactgaagggcattggaatttactcagttgtcctga
cctagatcaacaaataccatccaaaggaacggacttaaacctgaagttct
tggaaagataggaattaacctaagttgaatgagggaatcagatccaagga
atattg
tgcagaaactgggtggcaagtgccaggctctcaaccttccaaatgcacac
ctgggttcctgtacctctaccatgggggtgggccactaggatttcccgca
acccccagctttttatgacccatctgccaataaaccagcccccccttctg
ttcagagccataaaaccaaaggagggggggcttgccaaaccactagggaa
tagagaaagcctggttccctggagttgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128482890_128484093
seq2: B6Ng01-225C01.b_47_1252 (reverse)

seq1  CAATATTCCTTTGATCTTGATTCCTCTTTTCTATTTTGTGTTATTCCTA-  49
      ||||||||||| |||| |||||||    ||| | || |  | ||||||| 
seq2  CAATATTCCTTGGATC-TGATTCCCTCATTCAACTTAGGTTAATTCCTAT  49

seq1  CTTTCCAGGA--CTCAGTTTAAATGTCGTTCCTTGTGATGGTATTTGTTG  97
      ||||||| ||   |||| || ||   ||||||||  ||||||||||||||
seq2  CTTTCCAAGAACTTCAGGTTTAAGTCCGTTCCTTTGGATGGTATTTGTTG  99

seq1  ATTCTAGTTCA-GACAACTGAGT-AATTCAATTGCCTTTCAGTTTAAAAA  145
      | ||||| ||| ||||||||||| ||||| | |||| |||||||  ||||
seq2  A-TCTAGGTCAGGACAACTGAGTAAATTCCAATGCCCTTCAGTT--AAAA  146

seq1  TC-TTATTTAGATCATAACATTAACACTCAAT-AGGCTGAAATGTG-TCT  192
      || ||||||||||||| ||||| ||||||||| ||||||||||||| |||
seq2  TCTTTATTTAGATCAT-ACATT-ACACTCAATAAGGCTGAAATGTGTTCT  194

seq1  TCAACTTTCACACTAGAGTCAATCTCTTAATTGGGTACCTAGTCAGTGAG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTTCACACTAGAGTCAATCTCTTAATTGGGTACCTAGTCAGTGAG  244

seq1  AGAGAGCTTGGCACACAGTAGGAACTCATTCATTAAGAGTTCAGTTCTTG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCTTGGCACACAGTAGGAACTCATTCATTAAGAGTTCAGTTCTTG  294

seq1  AATTCTTTAAAGATTCACAAGCTTTTTGATTGTATCTTTGAATGCTTGCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTAAAGATTCACAAGCTTTTTGATTGTATCTTTGAATGCTTGCT  344

seq1  TCACCTGTTGGTTCCTTAGGGTATAAATGAAGGGATTCAATAAAGGAGCA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTTGGTTCCTTAGGGTATAAATGAAGGGATTCAATAAAGGAGCA  394

seq1  ACTGAAGTAATGAAAAGGGCTACTCCTTTATCGAATGTGCCCCCTACTTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGTAATGAAAAGGGCTACTCCTTTATCGAATGTGCCCCCTACTTT  444

seq1  TGCTGAAGGCTTAACATATATGAAGAAGCAGCTCCCATAAGAGAGGGAGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGGCTTAACATATATGAAGAAGCAGCTCCCATAAGAGAGGGAGA  494

seq1  TAACAATCATGTGGGAAGAACACGTGGAAAAAGCCTTTGTCCTTTGTTGG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATCATGTGGGAAGAACACGTGGAAAAAGCCTTTGTCCTTTGTTGG  544

seq1  GCTGAAGGGAGCTTGAGAATTGTCTTGATGATGAATGTATAGGAGAGAGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGGAGCTTGAGAATTGTCTTGATGATGAATGTATAGGAGAGAGT  594

seq1  TACCAGCATTAGAGTCACCACCAGGGTCACAGATGCCACGAGAAAGACAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCATTAGAGTCACCACCAGGGTCACAGATGCCACGAGAAAGACAA  644

seq1  CTTTTTCAATGAGGCTTGTGTCAGAACAGGAGAGTTTTCGAAGAGGCTCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAATGAGGCTTGTGTCAGAACAGGAGAGTTTTCGAAGAGGCTCA  694

seq1  AAGTCACAGAAATAATGATTTAGCCTGTTGGATGCACAGAAGTTCTGCTG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACAGAAATAATGATTTAGCCTGTTGGATGCACAGAAGTTCTGCTG  744

seq1  ACTCATCAAAGTGATGGGAGGTATAATGACCATCAACCCAGCCAGCCAAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCAAAGTGATGGGAGGTATAATGACCATCAACCCAGCCAGCCAAG  794

seq1  AGCAGAGAACCAGATGGGTACAGACTCTGTTGCTCATGATTGCCATGTAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAACCAGATGGGTACAGACTCTGTTGCTCATGATTGCCATGTAG  844

seq1  TGCAGGGGTTTGCATATGGCCACATAGCGATCATAGGACATAGCAGCCAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGGTTTGCATATGGCCACATAGCGATCATAGGACATAGCAGCCAG  894

seq1  GAGATAAAACTCTGTTGCTCCAAGAAAGATGGCAAAGAAATACTGAGCAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAACTCTGTTGCTCCAAGAAAGATGGCAAAGAAATACTGAGCAA  944

seq1  AGCAGCCAGCAAAGCTAATACTCTTGTTTCCCGTTGTAATGCTGACCAGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCAGCAAAGCTAATACTCTTGTTTCCCGTTGTAATGCTGACCAGG  994

seq1  ACCCTGGGGATGAAGATGTTTGTGAAAGAAATTTCTAGGAAGGAGAAGTT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGGGATGAAGATGTTTGTGAAAGAAATTTCTAGGAAGGAGAAGTT  1044

seq1  CCGGAGGAAGAAATACATGGGAGTGTGAAGGTGCGAATCCAGCAGGGTGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGGAAGAAATACATGGGAGTGTGAAGGTGCGAATCCAGCAGGGTGA  1094

seq1  GGACGAGGATGGTCAGGTTTCCAATCATGCTGAATACATAGGCAAGAAGA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAGGATGGTCAGGTTTCCAATCATGCTGAATACATAGGCAAGAAGA  1144

seq1  AGAAAAGTGAAAACTGCCACCTGAAGTTCAGGGACATCCGTGAGTCCTAG  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTGAAAACTGCCACCTGAAGTTCAGGGACATCCGTGAGTCCTAG  1194

seq1  AAGGATGAATTC  1204
      ||||||||||||
seq2  AAGGATGAATTC  1206

seq1: chr10_128327180_128327417
seq2: B6Ng01-225C01.g_72_309

seq1  TGCAGAAACTGGGTGGCAAGTGCCAGGCTCTCAACCTTCCAAATGCACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAACTGGGTGGCAAGTGCCAGGCTCTCAACCTTCCAAATGCACAC  50

seq1  CTGGGTTCCTGTACCTCTACCATGGGGGTGGGCCACTAGGATTTCCCGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCCTGTACCTCTACCATGGGGGTGGGCCACTAGGATTTCCCGCA  100

seq1  ACCCCCAGCTTTTTATGACCCATCTGCCAATAAACCAGCCCCCCCTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGCTTTTTATGACCCATCTGCCAATAAACCAGCCCCCCCTTCTG  150

seq1  TTCAGAGCCATAAAACCAAAGGAGGGGGGGCTTGCCAAACCACTAGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGCCATAAAACCAAAGGAGGGGGGGCTTGCCAAACCACTAGGGAA  200

seq1  TAGAGAAAGCCTGGTTCCCTGGAGTTGGGGGGGGGGGG  238
      ||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAGCCTGGTTCCCTGGAGTTGGGGGGGGGGGG  238