BAC Information

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BAC

Clone NameB6Ng01-225H23
Chromosome10 (Build37)
Map Location 57,196,774 - 57,197,906
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668347, LOC100042622, LOC668355, LOC100042628, EG629739, LOC629742, LOC668363
Downstream geneHsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263, Gcc2, Lims1, Ranbp2, 6230424H07Rik, LOC100038981, Edar, LOC624335
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225H23.bB6Ng01-225H23.g
ACCGA039677GA039678
length1,136474
definitionB6Ng01-225H23.b B6Ng01-225H23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttccttatactgaaaccactctgacacctgcaggttgcttagc
ctgtaacctttgtattcgaggcatttgagactcaagaattttcctggagt
cctccattactggaatggtacagagtagtcaggttattagtactgagtgt
tggatctcaagtagtaaagggtatccatttgtttcttcatacattttaaa
gctttattaagtgatttgttaattgttcatatgtggctttgatattttct
aaatcctggcagagacccagctttccagaatacgaaggggtaatcaccgc
attgctattgctctcataaaacaccatgaaccaagactatgtacagaata
aagagtatacttgagtttaccgttctagagaaataggacttcacaatgac
agagcagatggtagctagagttgtaagctgagggcttattgcatctttct
ctgcatagagagagaacacactgcgaatagtgcaacactttgaaacctca
gagcttgtccctggtgacatgctttctctagcaagaccacaccctctaaa
cttacccaaacaatgccaccagctggagactaagtattcaaatactggag
gccatgtaggtcacactaccataggaggtaatggcgctgttttgcctgct
gtcttttgtcttggaagaacacctgtagtcactctaaagtcttctaggcc
acacacttcagcaggctcatcaacatagtaaatgacattttgtaacctct
ggctgactcatctttgtatgcgtggaagaattccaactgagatttatgtg
cctggtaacattccacattatcgcaatattgtgggaaaacaactggacct
ttttccctaacagttaattctttgggagggaccaaaaatatccagtcatt
gttaatatgaaatcagttgagtttcattcttctgagtggaaacgtgacaa
gttttccaaacttgtggaagagaagcgtctttctttcactattgagttca
ggtggaggaagctgggatttcagcactggcttgtaaagttcattattaca
tgtgactttgcagtgtctctcatggtggagaaatatattcagatcttaca
gcagcagcctttattggtgtgatgagtttcaattgt
ctgatatttccaatacttttaacattaaaggatattgtaggttctcaaat
tctttttctgcatctaaggagatgatcatatgatttttttcctttgagta
tgtttatatagtggattatgttaatgggttttcatacattgaaccaacct
tgcatccctgaagtgaagcctacttgattgtggtgaaagatggttttgat
gtgttcttggattcggcttgcaagaattttgttgagtatttttgcatcaa
tattcataagtgagattggtctgaagttctctttttgcttgggtccttgt
gtggtttaagtatcagagtaattgtggcttcatagaatgaattaggtagt
attttattctgtttctattttatggaatagtttgaggtatatgggtatca
ggtcttctttgaaggtctggtagaattctgtactaaatccatcttgtcct
ggattttttttggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_57196774_57197906
seq2: B6Ng01-225H23.b_48_1183 (reverse)

seq1  ACAATGGAAACTCATCACA-CAATAAA-GCTGCTGGCTGGTAAGATCTTG  48
      ||||| ||||||||||||| ||||||| |||||| ||| |||||||||  
seq2  ACAATTGAAACTCATCACACCAATAAAGGCTGCT-GCT-GTAAGATCT--  46

seq1  GAATATATTTCT-CACCATGAAGAGACACTGCAAAGTCACATGTAATAAT  97
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  GAATATATTTCTCCACCATG-AGAGACACTGCAAAGTCACATGTAATAAT  95

seq1  GAACTTTACAAGCCAGTGCTGAAAT-CCAGCTTCCTC--ACTGAACTC-A  143
      ||||||||||||||||||||||||| |||||||||||   |||||||| |
seq2  GAACTTTACAAGCCAGTGCTGAAATCCCAGCTTCCTCCACCTGAACTCAA  145

seq1  TAGTTGAAAG-AAGACGCTTCTCTTCCACAAGTTTGGAAAACTTTGTCAC  192
      ||| |||||| ||||||||||||||||||||||||||||||| |||||||
seq2  TAG-TGAAAGAAAGACGCTTCTCTTCCACAAGTTTGGAAAAC-TTGTCAC  193

seq1  GTTTCCACTCAGAAGAATGAAACTCAACTGATTTCATATTAACAATGACT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCACTCAGAAGAATGAAACTCAACTGATTTCATATTAACAATGACT  243

seq1  GGATATTTTTGGTCCCTCCCAAAGAATT-ACTGTTAGGG-AAAAGGTCCA  290
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GGATATTTTTGGTCCCTCCCAAAGAATTAACTGTTAGGGAAAAAGGTCCA  293

seq1  GTTGTTTTCCCACAATATTGCGATAATGTGGAATGTTACCAGGCACATAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTCCCACAATATTGCGATAATGTGGAATGTTACCAGGCACATAA  343

seq1  ATCTCAGTTGGAATTCTTCCACGCATACAAAGATGAGTCAGCCAGAGGTT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTTGGAATTCTTCCACGCATACAAAGATGAGTCAGCCAGAGGTT  393

seq1  ACAAAATGTCATTTACTATGTTGATGAGCCTGCTGAAGTGTGTGGCCTAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGTCATTTACTATGTTGATGAGCCTGCTGAAGTGTGTGGCCTAG  443

seq1  AAGACTTTAGAGTGACTACAGGTGTTCTTCCAAGACAAAAGACAGCAGGC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTAGAGTGACTACAGGTGTTCTTCCAAGACAAAAGACAGCAGGC  493

seq1  AAAACAGCGCCATTACCTCCTATGGTAGTGTGACCTACATGGCCTCCAGT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCGCCATTACCTCCTATGGTAGTGTGACCTACATGGCCTCCAGT  543

seq1  ATTTGAATACTTAGTCTCCAGCTGGTGGCATTGTTTGGGTAAGTTTAGAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATACTTAGTCTCCAGCTGGTGGCATTGTTTGGGTAAGTTTAGAG  593

seq1  GGTGTGGTCTTGCTAGAGAAAGCATGTCACCAGGGACAAGCTCTGAGGTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGTCTTGCTAGAGAAAGCATGTCACCAGGGACAAGCTCTGAGGTT  643

seq1  TCAAAGTGTTGCACTATTCGCAGTGTGTTCTCTCTCTATGCAGAGAAAGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTGTTGCACTATTCGCAGTGTGTTCTCTCTCTATGCAGAGAAAGA  693

seq1  TGCAATAAGCCCTCAGCTTACAACTCTAGCTACCATCTGCTCTGTCATTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAAGCCCTCAGCTTACAACTCTAGCTACCATCTGCTCTGTCATTG  743

seq1  TGAAGTCCTATTTCTCTAGAACGGTAAACTCAAGTATACTCTTTATTCTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCCTATTTCTCTAGAACGGTAAACTCAAGTATACTCTTTATTCTG  793

seq1  TACATAGTCTTGGTTCATGGTGTTTTATGAGAGCAATAGCAATGCGGTGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTCTTGGTTCATGGTGTTTTATGAGAGCAATAGCAATGCGGTGA  843

seq1  TTACCCCTTCGTATTCTGGAAAGCTGGGTCTCTGCCAGGATTTAGAAAAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCCTTCGTATTCTGGAAAGCTGGGTCTCTGCCAGGATTTAGAAAAT  893

seq1  ATCAAAGCCACATATGAACAATTAACAAATCACTTAATAAAGCTTTAAAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGCCACATATGAACAATTAACAAATCACTTAATAAAGCTTTAAAA  943

seq1  TGTATGAAGAAACAAATGGATACCCTTTACTACTTGAGATCCAACACTCA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAAGAAACAAATGGATACCCTTTACTACTTGAGATCCAACACTCA  993

seq1  GTACTAATAACCTGACTACTCTGTACCATTCCAGTAATGGAGGACTCCAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAATAACCTGACTACTCTGTACCATTCCAGTAATGGAGGACTCCAG  1043

seq1  GAAAATTCTTGAGTCTCAAATGCCTCGAATACAAAGGTTACAGGCTAAGC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTCTTGAGTCTCAAATGCCTCGAATACAAAGGTTACAGGCTAAGC  1093

seq1  AACCTGCAGGTGTCAGAGTGGTTTCAGTATAAGGAAAGAATTC  1133
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCAGGTGTCAGAGTGGTTTCAGTATAAGGAAAGAATTC  1136