BAC Information

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BAC

Clone NameB6Ng01-225O06
Chromosome10 (Build37)
Map Location 15,527,060 - 15,602,201
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666917, LOC637043, LOC100039492, LOC671439
Downstream geneLOC382457, LOC546472, LOC100039576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225O06.bB6Ng01-225O06.g
ACCGA039971GA039972
length1,1141,194
definitionB6Ng01-225O06.b B6Ng01-225O06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,527,060 - 15,528,173)(15,600,993 - 15,602,201)
sequence
gaattcctcagaatagtaggtttcgaattagagtatcagaactatttcct
tgtctggaaactactacaaagacaatgcaagattttctttttcattttta
tttttggcgtacataggagtgaaactcaagaactcatccttgctaggaaa
atgctctaccagcttagttacatccccacccctcaagtgtccagatggac
gtgataagaataagacagaagcattatacatgtaaaacatgcactctgtc
acctctcccacccactgggaagtactaaaaatgtaatgagtggtttagaa
atttctacagtgaatttatatttctgtaaatcttagagttaactatggaa
gcatgagctatataaaattttctatttctattctgcttttggcccacttt
ctgagttccctaatttgaacatactattctcatttttttctcttactcaa
actcagtgttataactttttagtaataaccttaatttagatagttgacca
aaagctaagcatgctgcatgagatataagtaattcaaaatgcgttcctcc
tggataaaaatcaaacagatactagatacaaggctataccaagatgcacg
ctcttgttctattttatccattggttctttaagagtttttaattttgtga
aacatattttgaccatataaatccccccaactcttaccagatccaccctc
acttctttctctaccctactttacaaaaccaaacatactctaaaacccta
aagaccaatttgtgctaccttaaatatttttgatatgtggtcttacattg
gagtatggtctgttttctagggctacactgttaggaaaagctgaccctct
catttctgaacaacatttgacaattatttcatggctaggggtagaattat
atacctgttgtggcttgtgtttctacgggtattgcccatactgtcccaac
tactgtgaatccatgttgtagctgccctgtaatgactggagaatgtctcc
ttgtagtcatcttttggaaagctaaacccctgttctgcaatgattaatga
gcattaaaggatgatagtttatttgttttcctagatcttgagattctcag
tctgtttattctcg

gaattcatctcagcttcagtagttagttgtatgagccaataaatgctctt
agagaagtttccacatcctgtcatttccactaaaaacactttaaccaatc
tgtggacgttgtaatataatatttaccaatgattgatcttgtttaatctt
tctatacatctctaatacattttcttttatgtatttttgttctggcttca
tagtatgaggcttatcagggtattagtcatttcaaagtactttatctcat
taattctttccagttgcttctttagaataattaaattacaggaatttttg
gtgtctttatatgaatatttaattcatttacttcctttctttctctttga
ataatagagattaattatggctttgaaagctggcttgaaaaagacttcca
attctattccattagttttgatacaaaattattctatggctattatttcc
taaatagcccatttgaattcattttctttttgaaccactgagaattattt
atgataataattctgttaaaatgttatgtgcacacatttcatttcagtgt
ccgtgtatgcagaccttgaacatttttatgaaagcaatatattaaaagtt
ttttgtgtcacttcatgtgacaaagtttactattccattttagtgattca
accaaagtactgttttatgctacagcatgaatgcacaaatgtcatgttga
acaaatattatttactttatcttgtttcatataatattttattagatctt
tgagaacttcatatgagctgacaatgtgatttgatatttacccatcccat
ttctccttcaacattccatatgctaatatgtagccatttactagaattgt
ggatgatgtatcaaagttgagacccttaaagaaaactaaaaacctcagtt
agaggtaggggcttgtgaactcattcacaatccatgctagcttgtttgct
gtgttgattgtgtgcagacaaccacagctgctgtgagttaatgtatacag
aagcactatatattcagagtgctcatttattttaatatactatatctatt
tatattatttattattagtcattcacctacacccaacatagcccctcttc
ctccagctttcccccttgcaggcccctcacccattcttcctctggacgag
ggcgcgtgtcatggtacagcagcatggcacttctcagggtctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15527060_15528173
seq2: B6Ng01-225O06.b_48_1161

seq1  GAATTCCTCAGAATAGTAGGTTTCGAATTAGAGTATCAGAACTATTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGAATAGTAGGTTTCGAATTAGAGTATCAGAACTATTTCCT  50

seq1  TGTCTGGAAACTACTACAAAGACAATGCAAGATTTTCTTTTTCATTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGAAACTACTACAAAGACAATGCAAGATTTTCTTTTTCATTTTTA  100

seq1  TTTTTGGCGTACATAGGAGTGAAACTCAAGAACTCATCCTTGCTAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCGTACATAGGAGTGAAACTCAAGAACTCATCCTTGCTAGGAAA  150

seq1  ATGCTCTACCAGCTTAGTTACATCCCCACCCCTCAAGTGTCCAGATGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTACCAGCTTAGTTACATCCCCACCCCTCAAGTGTCCAGATGGAC  200

seq1  GTGATAAGAATAAGACAGAAGCATTATACATGTAAAACATGCACTCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGAATAAGACAGAAGCATTATACATGTAAAACATGCACTCTGTC  250

seq1  ACCTCTCCCACCCACTGGGAAGTACTAAAAATGTAATGAGTGGTTTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCCACCCACTGGGAAGTACTAAAAATGTAATGAGTGGTTTAGAA  300

seq1  ATTTCTACAGTGAATTTATATTTCTGTAAATCTTAGAGTTAACTATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTACAGTGAATTTATATTTCTGTAAATCTTAGAGTTAACTATGGAA  350

seq1  GCATGAGCTATATAAAATTTTCTATTTCTATTCTGCTTTTGGCCCACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGCTATATAAAATTTTCTATTTCTATTCTGCTTTTGGCCCACTTT  400

seq1  CTGAGTTCCCTAATTTGAACATACTATTCTCATTTTTTTCTCTTACTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCCCTAATTTGAACATACTATTCTCATTTTTTTCTCTTACTCAA  450

seq1  ACTCAGTGTTATAACTTTTTAGTAATAACCTTAATTTAGATAGTTGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTGTTATAACTTTTTAGTAATAACCTTAATTTAGATAGTTGACCA  500

seq1  AAAGCTAAGCATGCTGCATGAGATATAAGTAATTCAAAATGCGTTCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAAGCATGCTGCATGAGATATAAGTAATTCAAAATGCGTTCCTCC  550

seq1  TGGATAAAAATCAAACAGATACTAGATACAAGGCTATACCAAGATGCACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAAAATCAAACAGATACTAGATACAAGGCTATACCAAGATGCACG  600

seq1  CTCTTGTTCTATTTTATCCATTGGTTCTTTAAGAGTTTTTAATTTTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTCTATTTTATCCATTGGTTCTTTAAGAGTTTTTAATTTTGTGA  650

seq1  AACATATTTTGACCATATAAATCCCCCCAACTCTTACCAGATCCACCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTTTGACCATATAAATCCCCCCAACTCTTACCAGATCCACCCTC  700

seq1  ACTTCTTTCTCTACCCTACTTTACAAAACCAAACATACTCTAAAACCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTCTCTACCCTACTTTACAAAACCAAACATACTCTAAAACCCTA  750

seq1  AAGACCAATTTGTGCTACCTTAAATATTTTTGATATGTGGTCTTACATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAATTTGTGCTACCTTAAATATTTTTGATATGTGGTCTTACATTG  800

seq1  GAGTATGGTCTGTTTTCTAGGGCTACACTGTTAGGAAAAGCTGACCCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGGTCTGTTTTCTAGGGCTACACTGTTAGGAAAAGCTGACCCTCT  850

seq1  CATTTCTGAACAACATTTGACAATTATTTCATGGCTAGGGGTAGAATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGAACAACATTTGACAATTATTTCATGGCTAGGGGTAGAATTAT  900

seq1  ATACCTGTTGTGGCTTGTGTTTCTACGGGTATTGCCCATACTGTCCCAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGTTGTGGCTTGTGTTTCTACGGGTATTGCCCATACTGTCCCAAC  950

seq1  TACTGTGAATCCATGTTGTAGCTGCCCTGTAATGACTGGAGAATGTCTCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGAATCCATGTTGTAGCTGCCCTGTAATGACTGGAGAATGTCTCC  1000

seq1  TTGTAGTCATCTTTTGGAAAGCTAAACCCCTGTTCTGCAATGATTAATGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTCATCTTTTGGAAAGCTAAACCCCTGTTCTGCAATGATTAATGA  1050

seq1  GCATTAAAGGATGATAGTTTATTTGTTTCCTTAGATC-TGAGAATTCTTC  1099
      |||||||||||||||||||||||||||| | |||||| |||| |||| ||
seq2  GCATTAAAGGATGATAGTTTATTTGTTTTCCTAGATCTTGAG-ATTC-TC  1098

seq1  AGTCTG-TTATTCTCG  1114
      |||||| |||||||||
seq2  AGTCTGTTTATTCTCG  1114


seq1: chr10_15600993_15602201
seq2: B6Ng01-225O06.g_66_1259 (reverse)

seq1  AGAGACC---TGAAGTGCCATGCTGGCTTGGTACCCATGACAAAGCGCCC  47
      |||||||    ||||||||||||| |||  ||| ||||||| | ||||||
seq2  AGAGACCCTGAGAAGTGCCATGCT-GCT--GTA-CCATGAC-ACGCGCCC  45

seq1  TCCTGTCAGAGGAGAAGAATGGGTGAGGGGCTTGCAAGGGGGGAAAGCTG  97
      || |  |||||  |||||||||||||||||| ||||| ||||||||||| 
seq2  TCGT-CCAGAG--GAAGAATGGGTGAGGGGCCTGCAA-GGGGGAAAGCT-  90

seq1  GGAGGAAGAGGGGCTATGTTGGGTGTAAGGTGAATGACTAAATAAATAAA  147
      |||||||||||||||||||||||||| ||||||||||||||       ||
seq2  GGAGGAAGAGGGGCTATGTTGGGTGT-AGGTGAATGACTAA------TAA  133

seq1  TAAATAAT-TAAATAGATATAGTATATAAAAATAAAATGAGCACTCTGAA  196
      |||||||| |||||||||||||||||| ||||| ||||||||||||||||
seq2  TAAATAATATAAATAGATATAGTATATTAAAAT-AAATGAGCACTCTGAA  182

seq1  TATTATAGTGCTTCTGTATACATTAACTCACAGCAGCTGTGGTTGTCTGC  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-TATAGTGCTTCTGTATACATTAACTCACAGCAGCTGTGGTTGTCTGC  231

seq1  ACACAATCAACACAGCAAACAAGCTAGCATGGATTGTGAATGAGTTCACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATCAACACAGCAAACAAGCTAGCATGGATTGTGAATGAGTTCACA  281

seq1  AGCCCCTACCTCTAACTGAGGTTTTTAGTTTTCTTTAAGGGTCTCAACTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTACCTCTAACTGAGGTTTTTAGTTTTCTTTAAGGGTCTCAACTT  331

seq1  TGATACATCATCCACAATTCTAGTAAATGGCTACATATTAGCATATGGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACATCATCCACAATTCTAGTAAATGGCTACATATTAGCATATGGAA  381

seq1  TGTTGAAGGAGAAATGGGATGGGTAAATATCAAATCACATTGTCAGCTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAGGAGAAATGGGATGGGTAAATATCAAATCACATTGTCAGCTCA  431

seq1  TATGAAGTTCTCAAAGATCTAATAAAATATTATATGAAACAAGATAAAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGTTCTCAAAGATCTAATAAAATATTATATGAAACAAGATAAAGT  481

seq1  AAATAATATTTGTTCAACATGACATTTGTGCATTCATGCTGTAGCATAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATTTGTTCAACATGACATTTGTGCATTCATGCTGTAGCATAAA  531

seq1  ACAGTACTTTGGTTGAATCACTAAAATGGAATAGTAAACTTTGTCACATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACTTTGGTTGAATCACTAAAATGGAATAGTAAACTTTGTCACATG  581

seq1  AAGTGACACAAAAAACTTTTAATATATTGCTTTCATAAAAATGTTCAAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACACAAAAAACTTTTAATATATTGCTTTCATAAAAATGTTCAAGG  631

seq1  TCTGCATACACGGACACTGAAATGAAATGTGTGCACATAACATTTTAACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATACACGGACACTGAAATGAAATGTGTGCACATAACATTTTAACA  681

seq1  GAATTATTATCATAAATAATTCTCAGTGGTTCAAAAAGAAAATGAATTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTATCATAAATAATTCTCAGTGGTTCAAAAAGAAAATGAATTCA  731

seq1  AATGGGCTATTTAGGAAATAATAGCCATAGAATAATTTTGTATCAAAACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGCTATTTAGGAAATAATAGCCATAGAATAATTTTGTATCAAAACT  781

seq1  AATGGAATAGAATTGGAAGTCTTTTTCAAGCCAGCTTTCAAAGCCATAAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATAGAATTGGAAGTCTTTTTCAAGCCAGCTTTCAAAGCCATAAT  831

seq1  TAATCTCTATTATTCAAAGAGAAAGAAAGGAAGTAAATGAATTAAATATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCTATTATTCAAAGAGAAAGAAAGGAAGTAAATGAATTAAATATT  881

seq1  CATATAAAGACACCAAAAATTCCTGTAATTTAATTATTCTAAAGAAGCAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAGACACCAAAAATTCCTGTAATTTAATTATTCTAAAGAAGCAA  931

seq1  CTGGAAAGAATTAATGAGATAAAGTACTTTGAAATGACTAATACCCTGAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGAATTAATGAGATAAAGTACTTTGAAATGACTAATACCCTGAT  981

seq1  AAGCCTCATACTATGAAGCCAGAACAAAAATACATAAAAGAAAATGTATT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCATACTATGAAGCCAGAACAAAAATACATAAAAGAAAATGTATT  1031

seq1  AGAGATGTATAGAAAGATTAAACAAGATCAATCATTGGTAAATATTATAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTATAGAAAGATTAAACAAGATCAATCATTGGTAAATATTATAT  1081

seq1  TACAACGTCCACAGATTGGTTAAAGTGTTTTTAGTGGAAATGACAGGATG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACGTCCACAGATTGGTTAAAGTGTTTTTAGTGGAAATGACAGGATG  1131

seq1  TGGAAACTTCTCTAAGAGCATTTATTGGCTCATACAACTAACTACTGAAG  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTTCTCTAAGAGCATTTATTGGCTCATACAACTAACTACTGAAG  1181

seq1  CTGAGATGAATTC  1209
      |||||||||||||
seq2  CTGAGATGAATTC  1194


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