BAC Information

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BAC

Clone NameB6Ng01-226N05
Chromosome10 (Build37)
Map Location 97,010,856 - 97,198,815
singlet/doubletdoublet
Overlap geneLum, Kera, Epyc, 4921510H08Rik
Upstream geneBtg1, LOC628256, 4930556N09Rik, EG667407, Dcn
Downstream geneEG667438, EG432494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226N05.bB6Ng01-226N05.g
ACCGA040654GA040655
length9231,177
definitionB6Ng01-226N05.b B6Ng01-226N05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,010,856 - 97,011,776)(97,197,643 - 97,198,815)
sequence
gaattcacaattacaaagagcctgtaagatgaatcctgaacctgcattta
gaaataattattgatcatccttagatgctttatttggtttcaggctctgt
aaaatcatgatgctaaaataattttcagttcaaggaaatcatggtggttt
tggtttcatttcattttaccttgtatcattattaaatgtgtatcctctaa
ggactcaaccccttggtgctgaaccatactccttagttctttctagacat
ccctttttcctttcctttttaacccatctccattcctctgagtttcctgc
tgatatgcagaacaactctctaccagtgatccacagaaaccacactaggc
tgggactcaaggagacaacttttattatcctttctgacttccattccagt
atctccaaacttaatattagtcctattgcaacctgccatcagaattcctt
cctctcaacccatatctacttgctagagttttcaacttgtaggttgcaac
tctgttgggggttgaataatcctttcatggggatcacctaagaccatcac
aaagatcagatatttacattttgatacataacagtagcaaaattacagtt
ttgaagtagcaataaaagtttttatgtgtagcccaggctggccttgaact
tatgattcccctgcctctgcctccttcagcaaatcctgccaccacattgt
aaatccataggaagaacaacaatatcaaccaaccaaatccccagagctcc
cagggactaagccatcaacaaaggagtacacatgggtccagatgcatatg
tagcagaggatggccttgtcatgcatcaatgggaggagaggtccttggtc
ctatgaaaggctagatagatgccctagggtaggagaatcgagggcaggga
gatgggagtgggtgaattgggta

gaattctttataagagtagtgttgcattttttgatttctataatgttaaa
catctctccagatgcaaagaacaaatttcatgggtcaatggcagaagtag
agatgctagaacagaatttatagaaaacaaacaaaacaaaaccaaacaaa
aacaagcaaggacacaaacaaacaacaaaatccacatgccctgaaatagg
atgacagtgttaaagatcagaattacaagactgtacctttggtggcatta
cagcaaactttgtttcatctccttctcctttataacttgtaatcttaaaa
actagatgtagtatacgctgaaaagttgaaatcctaaagtaagagggaac
aggtcagaacaacccaggccctgcttagtccctgaattaaaagctcttgt
gcgccatccatttcagcatatgtgagcaatgcacacatacactgagactc
tgatgattaaactaagaagagggtttttggctgctataatctactaataa
aagggctgccactagggcacacacataagctaagggggaagaacttgatg
caatgctgatgaacaaaacagagagctagctaaaactaggtaaatataat
gagctccccattttcaaaagaactggtggaaatggccaacaggttataag
catttaagtgcacacaatggttttgcacatagacactaattttgattgaa
aaagaaaaaaatatagtagaatgtatttatttatttattattggaaaaat
tgatttaactttatccatagttacatttaaaaaaggaaaaaagacatcat
gatagtaaatgaaatgtcacttgcagaaaaacgagtcataaagcgattga
attaccatggatacgatcttactaaataatttactgcccaaagaaaggaa
atcctagaatgaagacttacaaatggtccaaagatttttttttaacattt
ctaagtgttaatgaattgatttctaatggccttcccaaaataattccctg
acctgagctttgactaaccatgtggactatttttttatttaaattgtgta
acttccacttatatttagcatgcacaccttggctgttacagtcttatctt
ttctggaccactgaaccatactgggataaattctgaagaaaatgagaagg
acgatgtccaaacagagctaactcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97010856_97011776
seq2: B6Ng01-226N05.b_47_969

seq1  GAATTCACAATTACAAAGAGCCTGTAAGATGAATCCTGAACCTGCATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATTACAAAGAGCCTGTAAGATGAATCCTGAACCTGCATTTA  50

seq1  GAAATAATTATTGATCATCCTTAGATGCTTTATTTGGTTTCAGGCTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATTATTGATCATCCTTAGATGCTTTATTTGGTTTCAGGCTCTGT  100

seq1  AAAATCATGATGCTAAAATAATTTTCAGTTCAAGGAAATCATGGTGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATGATGCTAAAATAATTTTCAGTTCAAGGAAATCATGGTGGTTT  150

seq1  TGGTTTCATTTCATTTTACCTTGTATCATTATTAAATGTGTATCCTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCATTTCATTTTACCTTGTATCATTATTAAATGTGTATCCTCTAA  200

seq1  GGACTCAACCCCTTGGTGCTGAACCATACTCCTTAGTTCTTTCTAGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAACCCCTTGGTGCTGAACCATACTCCTTAGTTCTTTCTAGACAT  250

seq1  CCCTTTTTCCTTTCCTTTTTAACCCATCTCCATTCCTCTGAGTTTCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTTCCTTTCCTTTTTAACCCATCTCCATTCCTCTGAGTTTCCTGC  300

seq1  TGATATGCAGAACAACTCTCTACCAGTGATCCACAGAAACCACACTAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGCAGAACAACTCTCTACCAGTGATCCACAGAAACCACACTAGGC  350

seq1  TGGGACTCAAGGAGACAACTTTTATTATCCTTTCTGACTTCCATTCCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCAAGGAGACAACTTTTATTATCCTTTCTGACTTCCATTCCAGT  400

seq1  ATCTCCAAACTTAATATTAGTCCTATTGCAACCTGCCATCAGAATTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAAACTTAATATTAGTCCTATTGCAACCTGCCATCAGAATTCCTT  450

seq1  CCTCTCAACCCATATCTACTTGCTAGAGTTTTCAACTTGTAGGTTGCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAACCCATATCTACTTGCTAGAGTTTTCAACTTGTAGGTTGCAAC  500

seq1  TCTGTTGGGGGTTGAATAATCCTTTCATGGGGATCACCTAAGACCATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGGGGTTGAATAATCCTTTCATGGGGATCACCTAAGACCATCAC  550

seq1  AAAGATCAGATATTTACATTTTGATACATAACAGTAGCAAAATTACAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCAGATATTTACATTTTGATACATAACAGTAGCAAAATTACAGTT  600

seq1  TTGAAGTAGCAATAAAAGTTTTTATGTGTAGCCCAGGCTGGCCTTGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTAGCAATAAAAGTTTTTATGTGTAGCCCAGGCTGGCCTTGAACT  650

seq1  TATGATTCCCCTGCCTCTGCCTCCTTCAGCAAATCCTGCCACCACATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTCCCCTGCCTCTGCCTCCTTCAGCAAATCCTGCCACCACATTGT  700

seq1  AAATCCATAGGAAGAACAACAATATCAACCAACCAAATCCCCAGAGCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATAGGAAGAACAACAATATCAACCAACCAAATCCCCAGAGCTCC  750

seq1  CAGGGACTAAGCCATCAACAAAGGAGTACACATGGGTCCAGATGCATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACTAAGCCATCAACAAAGGAGTACACATGGGTCCAGATGCATATG  800

seq1  TAGCAGAGGATGGCCTTGTCATGCATCAATGGGAGGAGAGGTCCTTGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAGGATGGCCTTGTCATGCATCAATGGGAGGAGAGGTCCTTGGTC  850

seq1  CTATG-AAGGCTAGATAGATGCCCTAGGGTAGGAGAATCGAGGGCAGGGA  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAAGGCTAGATAGATGCCCTAGGGTAGGAGAATCGAGGGCAGGGA  900

seq1  GATGGGAGTGGGTGAA-TGGGTA  921
      |||||||||||||||| ||||||
seq2  GATGGGAGTGGGTGAATTGGGTA  923


seq1: chr10_97197643_97198815
seq2: B6Ng01-226N05.g_67_1243 (reverse)

seq1  GAAGAGTTAGTTGTGTGTTGGACATTCGTCCTCTCCATTTTCTTCAAGAT  50
      |||||||||| | ||| ||||||| |||||||   |||||||||||  ||
seq2  GAAGAGTTAGCTCTGT-TTGGACA-TCGTCCTTCTCATTTTCTTCAGAAT  48

seq1  TTAT-CCAGTATGG-TCAGTGGTCCAAGAAAAGGATAAGACTGGTAACAG  98
      |||| ||||||||| |||||||||| |||||| ||||||||| |||||||
seq2  TTATCCCAGTATGGTTCAGTGGTCC-AGAAAA-GATAAGACT-GTAACAG  95

seq1  CCAGGGTGTGCCATGCTAAATATAAGTGGAAG-TACACAA-TTAAAT-AG  145
      ||| |||||| ||||||||||||||||||||| ||||||| |||||| | 
seq2  CCAAGGTGTG-CATGCTAAATATAAGTGGAAGTTACACAATTTAAATAAA  144

seq1  AAAATAGTCCACATGGTTAGTCAAAGCTCAGGTCAGGG-ATTA-TTTGGG  193
      |||||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  AAAATAGTCCACATGGTTAGTCAAAGCTCAGGTCAGGGAATTATTTTGGG  194

seq1  AAAGCCATTAGAAATCAATTCATTAACACTTAGAAATGTT-AAAAAAAAT  242
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAGGCCATTAGAAATCAATTCATTAACACTTAGAAATGTTAAAAAAAAAT  244

seq1  CTTTGGACCATTTGTAAGTCTTCATTCTAGGATTTCC-TTCTTT-GGCAG  290
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  CTTTGGACCATTTGTAAGTCTTCATTCTAGGATTTCCTTTCTTTGGGCAG  294

seq1  TAAATTATTTAGTAAGATCGTATCCATGGTAATTCAATCGCTTTATGACT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATTTAGTAAGATCGTATCCATGGTAATTCAATCGCTTTATGACT  344

seq1  CGTTTTTCTGCAAGTGACATTTCATTTACTATCATGATGTCTTTTTTCCT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTCTGCAAGTGACATTTCATTTACTATCATGATGTCTTTTTTCCT  394

seq1  TTTTTAAATGTAACTATGGATAAAGTTAAATCAATTTTTCCAATAATAAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATGTAACTATGGATAAAGTTAAATCAATTTTTCCAATAATAAA  444

seq1  TAAATAAATACATTCTACTATATTTTTTTCTTTTTCAATCAAAATTAGTG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATACATTCTACTATATTTTTTTCTTTTTCAATCAAAATTAGTG  494

seq1  TCTATGTGCAAAACCATTGTGTGCACTTAAATGCTTATAACCTGTTGGCC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTGCAAAACCATTGTGTGCACTTAAATGCTTATAACCTGTTGGCC  544

seq1  ATTTCCACCAGTTCTTTTGAAAATGGGGAGCTCATTATATTTACCTAGTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACCAGTTCTTTTGAAAATGGGGAGCTCATTATATTTACCTAGTT  594

seq1  TTAGCTAGCTCTCTGTTTTGTTCATCAGCATTGCATCAAGTTCTTCCCCC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTAGCTCTCTGTTTTGTTCATCAGCATTGCATCAAGTTCTTCCCCC  644

seq1  TTAGCTTATGTGTGTGCCCTAGTGGCAGCCCTTTTATTAGTAGATTATAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTATGTGTGTGCCCTAGTGGCAGCCCTTTTATTAGTAGATTATAG  694

seq1  CAGCCAAAAACCCTCTTCTTAGTTTAATCATCAGAGTCTCAGTGTATGTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAAAACCCTCTTCTTAGTTTAATCATCAGAGTCTCAGTGTATGTG  744

seq1  TGCATTGCTCACATATGCTGAAATGGATGGCGCACAAGAGCTTTTAATTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGCTCACATATGCTGAAATGGATGGCGCACAAGAGCTTTTAATTC  794

seq1  AGGGACTAAGCAGGGCCTGGGTTGTTCTGACCTGTTCCCTCTTACTTTAG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTAAGCAGGGCCTGGGTTGTTCTGACCTGTTCCCTCTTACTTTAG  844

seq1  GATTTCAACTTTTCAGCGTATACTACATCTAGTTTTTAAGATTACAAGTT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAACTTTTCAGCGTATACTACATCTAGTTTTTAAGATTACAAGTT  894

seq1  ATAAAGGAGAAGGAGATGAAACAAAGTTTGCTGTAATGCCACCAAAGGTA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGAGAAGGAGATGAAACAAAGTTTGCTGTAATGCCACCAAAGGTA  944

seq1  CAGTCTTGTAATTCTGATCTTTAACACTGTCATCCTATTTCAGGGCATGT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGTAATTCTGATCTTTAACACTGTCATCCTATTTCAGGGCATGT  994

seq1  GGATTTTGTTGTTTGTTTGTGTCCTTGCTTGTTTTTGTTTGGTTTTGTTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGTTGTTTGTTTGTGTCCTTGCTTGTTTTTGTTTGGTTTTGTTT  1044

seq1  TGTTTGTTTTCTATAAATTCTGTTCTAGCATCTCTACTTCTGCCATTGAC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTCTATAAATTCTGTTCTAGCATCTCTACTTCTGCCATTGAC  1094

seq1  CCATGAAATTTGTTCTTTGCATCTGGAGAGATGTTTAACATTATAGAAAT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAATTTGTTCTTTGCATCTGGAGAGATGTTTAACATTATAGAAAT  1144

seq1  CAAAAAATGCAACACTACTCTTATAAAGAATTC  1173
      |||||||||||||||||||||||||||||||||
seq2  CAAAAAATGCAACACTACTCTTATAAAGAATTC  1177


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