BAC Information

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BAC

Clone NameB6Ng01-227G15
Chromosome10 (Build37)
Map Location 112,629,555 - 112,781,167
singlet/doubletdoublet
Overlap genenone
Upstream geneCaps2, Kcnc2, LOC100042639, 4921506J03Rik
Downstream geneLOC100042655, LOC100042666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227G15.bB6Ng01-227G15.g
ACCGA041089GA041090
length1,214801
definitionB6Ng01-227G15.b B6Ng01-227G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,779,936 - 112,781,167)(112,629,555 - 112,630,353)
sequence
gaattccagccccattatcctgttctgcctccccttactcatgttcatgt
tttcctgtttggtgtgaatgggtttttgtgaactcaatgcaaacttactg
gtcttccaggataatctctctggatcaaggacagctgattagcaagctta
aattcccttagcatgtttcattcctgacagttaactgtcacatcaataga
gataaaggtagacatgaagagactaagaaaatagtctgatttattcactg
ttctaattcagtacatttcctcctaattctcctctcagaaaagaaatatg
actaatggtactaagaaatatcttcctaggacttcaactgattttgttag
gaaaggggagagttttcatggtctttatgcttgatggtcctcctgaaaga
aaaaaaagagagagagatggtaaattctctaagtttggaatgtaagttca
attcctcatgttctatattagacaaacttctcgatagtacagtccaaaac
tctcacccaaaactaaacacatctgtttgttttgatgtagataaggtaaa
taaaatatggttgatatagctgaaaatacttaagcaaaagtagtaataat
aagatgagcacatcacatgaagccaaagcatccagacatcaagtacaaaa
ccttccatttccttagcaacaagaacgaagttaggaatcctattgatact
gttattttccttctacctccatgacattgaataaatacagaataagctat
tatagtaggtgagcattttatttatatttacttacttttcatttatttct
atatacctttcatttacaaaggggcctctttgagaagctgataattttca
aatgaacttgctggcaagtttttttttgtttttttttttgtttgtttgtt
tgttgttgtttcactaaacctgaaacctagatgggcaaacacccttactg
cttagtcatataaacactgtgctaatcccatctttatcagaaaagcagct
gggcagtggtggcgcatgccttgtatcccagcactgggaggcaagaggca
ggtggatttctgagttcgaggccagccttggtctaccgaagtaagttcca
ggaccaccaggctatacagagaaccctgtctccaaaattaattaataatt
aaaccaccaccaaacctaccgaagcactacctaaagtgggagctgaccac
atctaggaagaggc
gaattctgtgaggccgtttacataagttattggttttatctgaaaaattc
tcacttaataaatcaataagatatagaaacttttaaaatggctttataga
ttatatgtatatgtatatatgtatatactagaatatacatttgaatgtat
actgaatatatattcaaatatatacaatatcattttatcaataataatat
aagagacaccaatgaacttttacccattgttcttatactatatagtccag
tcttttcaatataccttcctcctcttcatacgtagccaatcttgaaagtt
gagactacttacttgtttgtttttaatttaatattctgagatcttcacat
atttatagtgtacttttttcaattccagccttcccttttcccagtgcaat
tcctccaatgtcccttcatttccattcaaatatgtgacatgtgcttcttc
attattgtcatatatattttatatatatgtatgtactgtgtgtatgtgtg
tgtgtacagaaagatgggttgttattctttcttctagatgtatctattta
gggctgtcattttaggactggataatgctttagtctctggagaaagagtt
agtctctggtcattctctgtctctcactagccattaaactacctgtagtt
cttcatctttggctagggcctggttttactcctgattcactgtgttgttt
tcaggatgctactcattcatgctcagaactttacttctactcttttatcc
ccgtgtgaagcagagacagaaccagagagagacagagagaggggagagag
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112779936_112781167
seq2: B6Ng01-227G15.b_43_1256 (reverse)

seq1  GCCTCTTCCTAGGTGTGTGGTCAGGCTCACACTTTTAGTTTAGTTGCCTT  50
      ||||||||||||   |||||||| |||| ||||||  |  ||| |||  |
seq2  GCCTCTTCCTAG--ATGTGGTCA-GCTCCCACTTTAGG--TAG-TGC--T  42

seq1  TCTGATAAAGGTTTTGTTGTTGTTTTATTTTATTTTATTTTATTTTTGAG  100
      || |    |||||| || || |||| ||    | ||| || ||||| |||
seq2  TCGG---TAGGTTTGGTGGTGGTTTAAT----TATTAATTAATTTTGGAG  85

seq1  ACAGGGTTTCTCTGTATAGCCCTGGTTGTCCTGGAACTTAC-TCTGTAGA  149
      |||||| |||||||||||| |||||| |||||||||||||| || |||||
seq2  ACAGGG-TTCTCTGTATAG-CCTGGTGGTCCTGGAACTTACTTCGGTAGA  133

seq1  CC-AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTC-TGCCTCCCAAGT  197
      || |||||||||||||||||||||||||||||||||| |||||||| |||
seq2  CCAAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTTGCCTCCC-AGT  182

seq1  GCTGGGATTACAGGCATGCGCCACCACTGCCCAGCTGCTTTTCTGATAAA  247
      ||||||||   |||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATACAAGGCATGCGCCACCACTGCCCAGCTGCTTTTCTGATAAA  232

seq1  GATGGGATTAGCACAGTGTTTATATGACTAAGCAGTAAGGGTGTTTGCCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGATTAGCACAGTGTTTATATGACTAAGCAGTAAGGGTGTTTGCCC  282

seq1  ATCTAGGTTTCAGGTTTAGTGAAAACAAACAAACAAACAAACAAACAAAA  347
      ||||||||||||||||||||| ||||||   |||||||||||||||||||
seq2  ATCTAGGTTTCAGGTTTAGTG-AAACAA--CAACAAACAAACAAACAAAA  329

seq1  AAAAAAACAAAAAAAAACTTGCCAGCAAGTTCATTTGAAAATTATCAGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACAAAAAAAAACTTGCCAGCAAGTTCATTTGAAAATTATCAGCT  379

seq1  TCTCAAAGAGGCCCCTTTGTAAATGAAAGGTATATAGAAATAAATGAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGAGGCCCCTTTGTAAATGAAAGGTATATAGAAATAAATGAAAA  429

seq1  GTAAGTAAATATAAATAAAATGCTCACCTACTATAATAGCTTATTCTGTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTAAATATAAATAAAATGCTCACCTACTATAATAGCTTATTCTGTA  479

seq1  TTTATTCAATGTCATGGAGGTAGAAGGAAAATAACAGTATCAATAGGATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAATGTCATGGAGGTAGAAGGAAAATAACAGTATCAATAGGATT  529

seq1  CCTAACTTCGTTCTTGTTGCTAAGGAAATGGAAGGTTTTGTACTTGATGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTCGTTCTTGTTGCTAAGGAAATGGAAGGTTTTGTACTTGATGT  579

seq1  CTGGATGCTTTGGCTTCATGTGATGTGCTCATCTTATTATTACTACTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGCTTTGGCTTCATGTGATGTGCTCATCTTATTATTACTACTTTT  629

seq1  GCTTAAGTATTTTCAGCTATATCAACCATATTTTATTTACCTTATCTACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGTATTTTCAGCTATATCAACCATATTTTATTTACCTTATCTACA  679

seq1  TCAAAACAAACAGATGTGTTTAGTTTTGGGTGAGAGTTTTGGACTGTACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACAAACAGATGTGTTTAGTTTTGGGTGAGAGTTTTGGACTGTACT  729

seq1  ATCGAGAAGTTTGTCTAATATAGAACATGAGGAATTGAACTTACATTCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGAAGTTTGTCTAATATAGAACATGAGGAATTGAACTTACATTCCA  779

seq1  AACTTAGAGAATTTACCATCTCTCTCTCTTTTTTTTCTTTCAGGAGGACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGAGAATTTACCATCTCTCTCTCTTTTTTTTCTTTCAGGAGGACC  829

seq1  ATCAAGCATAAAGACCATGAAAACTCTCCCCTTTCCTAACAAAATCAGTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCATAAAGACCATGAAAACTCTCCCCTTTCCTAACAAAATCAGTT  879

seq1  GAAGTCCTAGGAAGATATTTCTTAGTACCATTAGTCATATTTCTTTTCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCTAGGAAGATATTTCTTAGTACCATTAGTCATATTTCTTTTCTG  929

seq1  AGAGGAGAATTAGGAGGAAATGTACTGAATTAGAACAGTGAATAAATCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGAATTAGGAGGAAATGTACTGAATTAGAACAGTGAATAAATCAG  979

seq1  ACTATTTTCTTAGTCTCTTCATGTCTACCTTTATCTCTATTGATGTGACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTCTTAGTCTCTTCATGTCTACCTTTATCTCTATTGATGTGACA  1029

seq1  GTTAACTGTCAGGAATGAAACATGCTAAGGGAATTTAAGCTTGCTAATCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTGTCAGGAATGAAACATGCTAAGGGAATTTAAGCTTGCTAATCA  1079

seq1  GCTGTCCTTGATCCAGAGAGATTATCCTGGAAGACCAGTAAGTTTGCATT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTTGATCCAGAGAGATTATCCTGGAAGACCAGTAAGTTTGCATT  1129

seq1  GAGTTCACAAAAACCCATTCACACCAAACAGGAAAACATGAACATGAGTA  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCACAAAAACCCATTCACACCAAACAGGAAAACATGAACATGAGTA  1179

seq1  AGGGGAGGCAGAACAGGATAATGGGGCTGGAATTC  1232
      |||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGCAGAACAGGATAATGGGGCTGGAATTC  1214

seq1: chr10_112629555_112630353
seq2: B6Ng01-227G15.g_70_870

seq1  GAATTCTGTGAGGCCGTTTACATAAGTTATTGGTTTTATCTGAAAAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAGGCCGTTTACATAAGTTATTGGTTTTATCTGAAAAATTC  50

seq1  TCACTTAATAAATCAATAAGATATAGAAACTTTTAAAATGGCTTTATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAATAAATCAATAAGATATAGAAACTTTTAAAATGGCTTTATAGA  100

seq1  TTATATGTATATGTATATATGTATATACTAGAATATACATTTGAATGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGTATATGTATATATGTATATACTAGAATATACATTTGAATGTAT  150

seq1  ACTGAATATATATTCAAATATATACAATATCATTTTATCAATAATAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATATATATTCAAATATATACAATATCATTTTATCAATAATAATAT  200

seq1  AAGAGACACCAATGAACTTTTACCCATTGTTCTTATACTATATAGTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACACCAATGAACTTTTACCCATTGTTCTTATACTATATAGTCCAG  250

seq1  TCTTTTCAATATACCTTCCTCCTCTTCATACGTAGCCAATCTTGAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCAATATACCTTCCTCCTCTTCATACGTAGCCAATCTTGAAAGTT  300

seq1  GAGACTACTTACTTGTTTGTTTTTAATTTAATATTCTGAGATCTTCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTACTTACTTGTTTGTTTTTAATTTAATATTCTGAGATCTTCACAT  350

seq1  ATTTATAGTGTACTTTTTTCAATTCCAGCCTTCCCTTTTCCCAGTGCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGTGTACTTTTTTCAATTCCAGCCTTCCCTTTTCCCAGTGCAAT  400

seq1  TCCTCCAATGTCCCTTCATTTCCATTCAAATATGTGACATGTGCTTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAATGTCCCTTCATTTCCATTCAAATATGTGACATGTGCTTCTTC  450

seq1  ATTATTGTCATATATATTTTATATATATGTATGTACTGTGTGTATGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTCATATATATTTTATATATATGTATGTACTGTGTGTATGTGTG  500

seq1  TGTGTACAGAAAGATGGGTTGTTATTCTTTCTTCTAGATGTATCTATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACAGAAAGATGGGTTGTTATTCTTTCTTCTAGATGTATCTATTTA  550

seq1  GGGCTGTCATTTTAGGACTGGATAATGCTTTAGTCTCTGGAGAAAGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTCATTTTAGGACTGGATAATGCTTTAGTCTCTGGAGAAAGAGTT  600

seq1  AGTCTCTGGTCATTCTCTGTCTCTCACTAGCCATT-AACTACCTGTAGTT  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTCTCTGGTCATTCTCTGTCTCTCACTAGCCATTAAACTACCTGTAGTT  650

seq1  CTTCATCTTTGGCTAGGGCCTGG-TTTACTCCTGATTCACTGTG-TGTTT  697
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  CTTCATCTTTGGCTAGGGCCTGGTTTTACTCCTGATTCACTGTGTTGTTT  700

seq1  TCAGGATGCTACTCATTCATGCTCAGAACTTTACTTCTACTCTTTTATCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGCTACTCATTCATGCTCAGAACTTTACTTCTACTCTTTTATCC  750

seq1  ACGTGTGAAGCAGAGACAGAACCAGAGAGAGAGAGAGAGAGGGAGAGAGA  797
       ||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  CCGTGTGAAGCAGAGACAGAACCAGAGAGAGACAGAGAGAGGG-GAGAGA  799

seq1  GA  799
      ||
seq2  GA  801