BAC Information

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BAC

Clone NameB6Ng01-228K02
Chromosome10 (Build37)
Map Location 34,763,594 - 34,764,773
singlet/doubletsinglet
Overlap genenone
Upstream gene4732454E20Rik, BB146404, A630077B13Rik, Dse, Tspyl1, Tspyl4, Nt5dc1, Col10a1, Frk, LOC667824
Downstream geneLOC100041585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228K02.bB6Ng01-228K02.g
ACCGA041996GA041997
length1,188758
definitionB6Ng01-228K02.b B6Ng01-228K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttcctgggttgctaaaagatcgaaaaatatatagccagacat
ctgacacagggtttcattgtataattgccagtagtatttagtggaaattg
taaccttaaagcccagtgaattctctagcatgggaagaaaatacaaggaa
tattttcaaattgtggacaataaactaactttatgcctggagcttaaggc
tgagagattatgctggccttataaagttcccattctctcatggactatca
ttatattgaatgtatcatagaataaaaatttcccatgtagaagttttgca
tatgacagttttcatagttcgtccttagacattgcttaaggacataagca
ttgtttagatttgaaggtttacagtgtctacaaatggaattacctgattg
atttcactaagactttaaaccaagtgaccatgataccagcactacatatg
tcccttacactggtctcactctgccttccgtcaaagaaaagatagttaac
agtacttatttcatctcattttcatactgtcactcatgatagatactgtt
aatttttgctgctctgtttgtatatgagatttcatcatttataccattaa
tcacctgcatgattgtcttaaaaacaaacaaagcccattcttatatgttt
tattctaaaatataattattccagatatcctgctgttaatggcattgaat
cctaattacttccaaatgaatccattagtcataaatgcagatcctaaaac
tctcatgtctacagtaagtagatggaacaatattataaatttatcatcga
caataaaactcagtcttattagatctagctttttagcccttttcaaattc
ttttttgtacaatattattaacatatgataaagtttctgcattttttatt
taaatctaaaaataaaatataatttgttcctttactgaaaatttgtattc
agtaatgcatagctaaaaataaatgtttttcattacaccaaagtgggatt
attgggtgaatgggtgtcttccattattgacccactgggaaagtaattta
ctttagcaatggtgaacccaacaaactgttttcttcaatggacttgtgat
gtaatttgtaggatttgtggctattatcatttattgggtttctatacctc
ataaataaaatgttttgccgagtttttcaattatatca

gaattctcagctgaggaaactcaagtgactgagaaccacctaaagaaaag
ttcaacaagcttagtcatcaaggaaattaaaatcaaaacagccctaagat
tccacctcacaccagtcagaatggctaagaccaaaaacacaggtgacagc
agatactggtgaggatgtggagaaagaggaacactcttctatagctggta
gaattccaagtaggtacaatcactctgaaaatcagtttggcagttcctca
gaaaattgggtataattctacctgaggacccacccataccactcctgggc
atatactcagaaggtgcttcaacatgtaataaggacaaatgctccactat
gttcatatcagccatatttataatagccagaagctggaaacaacccagat
gtccttcaacagaggaatggatacagaaaatgtggtccatttacaaaatg
gaatactattcagctattaaaaaacaatgacttcatgaaattcataggca
aatggatggatctagaaagtatcattctgagtgaggtaactcaatctcaa
aaagagcacacatggtatgtactcactgataggtgggtattagacaaaga
gcatggaatacccatgatacaactcaggcaccacatgaaactcaagagga
aggatgacccaaaaagtggatgattcagtcctacttagaagggggaaaca
aaataatcaagggagttagaaggtgggaggagcttgggaggaagagaagt
gggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_34763594_34764773
seq2: B6Ng01-228K02.b_46_1233 (reverse)

seq1  TGATATAAAATGTGAAAAACACTCTGCAAAAACAAATTTTATTTATTGAG  50
      ||||||||    ||||||  |||| |||||   | |||||||||||   |
seq2  TGATATAA---TTGAAAA--ACTCGGCAAA---ACATTTTATTTATGAGG  42

seq1  TATAGAAACCCAATAAATGATTATTAGGCCACAATTCCTAC-AATTACAT  99
      ||||||||||||||||||||| ||   ||||||| |||||| ||||||||
seq2  TATAGAAACCCAATAAATGATAAT--AGCCACAAATCCTACAAATTACAT  90

seq1  CACAAGTCATTTGA--GAAACAGTTTGTT-GGTTCA-CATTGCTAAAGTA  145
      ||||||||  ||||   |||||||||||| |||||| |||||||||||||
seq2  CACAAGTCCATTGAAGAAAACAGTTTGTTGGGTTCACCATTGCTAAAGTA  140

seq1  ATTTACTTT-CCAGTGGGTC-ATAATGG-AGACACCATTTCA-CCAAT-A  190
      | ||||||| |||||||||| ||||||| |||||||  |||| ||||| |
seq2  AATTACTTTCCCAGTGGGTCAATAATGGAAGACACCCATTCACCCAATAA  190

seq1  TTCCAC-TTGGTGTTATG-AAAACATTTATTTTTAGCTATGCATTACTGA  238
      | |||| ||||||| ||| |||||||||||||||||||||||||||||||
seq2  TCCCACTTTGGTGTAATGAAAAACATTTATTTTTAGCTATGCATTACTGA  240

seq1  ATAC-AATTTTCAGTAAAGG-ACAATTTATATTTTATTTTTAGATTTAA-  285
      |||| ||||||||||||||| |||| ||||||||||||||||||||||| 
seq2  ATACAAATTTTCAGTAAAGGAACAAATTATATTTTATTTTTAGATTTAAA  290

seq1  -TAAAAATGCAGAAACTTTATCATATGTTAATAATATTGTAC-AAAAAGA  333
        |||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAAAAAATGCAGAAACTTTATCATATGTTAATAATATTGTACAAAAAAGA  340

seq1  ATTTG-AAAGGGCTAAAAAGCTAGATCTAATAAGACTGAGTTTTATTGTC  382
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAAAGGGCTAAAAAGCTAGATCTAATAAGACTGAGTTTTATTGTC  390

seq1  GATGATAAATTTATAATATTGTTCCATCTACTTACTGTAGACATGAGAGT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAAATTTATAATATTGTTCCATCTACTTACTGTAGACATGAGAGT  440

seq1  TTTAGGATCTGCATTTATGACTAATGGATTCATTTGGAAGTAATTAGGAT  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATCTGCATTTATGACTAATGGATTCATTTGGAAGTAATTAGGAT  490

seq1  TCAATGCCATTAACAGCAGGATATCTGGAATAATTATATTTTAGAATAAA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCCATTAACAGCAGGATATCTGGAATAATTATATTTTAGAATAAA  540

seq1  ACATATAAGAATGGGCTTTGTTTGTTTTTAAGACAATCATGCAGGTGATT  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAGAATGGGCTTTGTTTGTTTTTAAGACAATCATGCAGGTGATT  590

seq1  AATGGTATAAATGATGAAATCTCATATACAAACAGAGCAGCAAAAATTAA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTATAAATGATGAAATCTCATATACAAACAGAGCAGCAAAAATTAA  640

seq1  CAGTATCTATCATGAGTGACAGTATGAAAATGAGATGAAATAAGTACTGT  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCTATCATGAGTGACAGTATGAAAATGAGATGAAATAAGTACTGT  690

seq1  TAACTATCTTTTCTTTGACGGAAGGCAGAGTGAGACCAGTGTAAGGGACA  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATCTTTTCTTTGACGGAAGGCAGAGTGAGACCAGTGTAAGGGACA  740

seq1  TATGTAGTGCTGGTATCATGGTCACTTGGTTTAAAGTCTTAGTGAAATCA  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGTGCTGGTATCATGGTCACTTGGTTTAAAGTCTTAGTGAAATCA  790

seq1  ATCAGGTAATTCCATTTGTAGACACTGTAAACCTTCAAATCTAAACAATG  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTAATTCCATTTGTAGACACTGTAAACCTTCAAATCTAAACAATG  840

seq1  CTTATGTCCTTAAGCAATGTCTAAGGACGAACTATGAAAACTGTCATATG  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTCCTTAAGCAATGTCTAAGGACGAACTATGAAAACTGTCATATG  890

seq1  CAAAACTTCTACATGGGAAATTTTTATTCTATGATACATTCAATATAATG  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTTCTACATGGGAAATTTTTATTCTATGATACATTCAATATAATG  940

seq1  ATAGTCCATGAGAGAATGGGAACTTTATAAGGCCAGCATAATCTCTCAGC  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCATGAGAGAATGGGAACTTTATAAGGCCAGCATAATCTCTCAGC  990

seq1  CTTAAGCTCCAGGCATAAAGTTAGTTTATTGTCCACAATTTGAAAATATT  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCTCCAGGCATAAAGTTAGTTTATTGTCCACAATTTGAAAATATT  1040

seq1  CCTTGTATTTTCTTCCCATGCTAGAGAATTCACTGGGCTTTAAGGTTACA  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTATTTTCTTCCCATGCTAGAGAATTCACTGGGCTTTAAGGTTACA  1090

seq1  ATTTCCACTAAATACTACTGGCAATTATACAATGAAACCCTGTGTCAGAT  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACTAAATACTACTGGCAATTATACAATGAAACCCTGTGTCAGAT  1140

seq1  GTCTGGCTATATATTTTTCGATCTTTTAGCAACCCAGGAAGAGAATTC  1180
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCTATATATTTTTCGATCTTTTAGCAACCCAGGAAGAGAATTC  1188


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