BAC Information

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BAC

Clone NameB6Ng01-229C02
Chromosome10 (Build37)
Map Location 128,000,956 - 128,002,044
singlet/doubletsinglet
Overlap genePa2g4
Upstream geneLrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453
Downstream geneErbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229C02.bB6Ng01-229C02.g
ACCGA042362GA042363
length1,084449
definitionB6Ng01-229C02.b B6Ng01-229C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcgtagacctgcctgcctctgtctccccacacatgtgctggca
ctgaaggtgagcccaccacaccctgctctacttcctaccttcccttccaa
aaataaggtcagcaccagcttctctcctctccatgatttgacacttaggc
cttaggcctcacacatcccaaagatgctgtggcaacccactccacacaca
caaacagaccaaaagacatttataggcgtcggggacaatggggaggtaga
gaactgctgagtcaaagttgaagcattgttaaatgttacctccgtccctc
cccagacacaaagtagtaatcataatttatgtggctgtatttccccatgt
ctaagtatataagcccaggggaattaacctaaggtcttaaagattcagag
ggctaaaactttacttccagtatatcaagatcacatgtaaccagtttcaa
aactattatctgaagttgcctgtggggttggagattctgtctgattcaaa
ccaacagcaaatactaaaacatcaccccaaataaggttatcattttgtgt
atgtctttatgatcatgggaattctaggtttgatgatttcttatgtgttt
tattctctggattccagaggaactaagatgtaaccaaagacaccctaaat
accttcttccaagtattttgtcaagtccattctaaaggcctaaggcagtt
ttttttttttcctcaagacagggtttctctgaaactcagaaatccgcctg
cctctgctccccaagtgctgggattaaaggcgtgagccaccactgccaag
tctaagacagtttttatcaagtgaattttaatttttaaaatgttaagagc
cgggcatggttacacacacctttaatcccagcactctggaacgctgaggt
gggcggatctctcaggccagcctggttctaagggagtaccagggacagcc
aagctacactgaaaggcccaaaaataagggggtaagggaagggaaagact
ggaaagagaaaacagtaagttatctgtctagtgcagacaactggttagga
gaagtagatcattagaaatgcttataatcctaaa
taggtatgtcacacttactccaactctacagttgattttttaaaagtgtg
cagcccaatttgatagcactgggacccagccctcagggtggtgggtgggg
gaggaggcaccaggatcatgagttcagccattctccatccttggatgcat
caaacgttcaaggtcagccagtgctgcctgagattttgacttgcaacaaa
caaaagctggacttcaggttggaacatagctcaatgagatcacctactca
tgcacgaggccctgggtctgatatccagggcccttatagacaaatactga
acaaaataaaaatataaaaaacaaaaataaagtttggaattacctctatg
gtaaagcacttgcttagcatttgtaaggtcctgggtttagccctgaacaa
tcctcgcctgtcataatattaatgtttttgacgggtttattgattataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128000956_128002044
seq2: B6Ng01-229C02.b_45_1128

seq1  GAATTCAGCGTAGACCTGCCTGCCTCTGTCTCCCCACACATGTGCTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCGTAGACCTGCCTGCCTCTGTCTCCCCACACATGTGCTGGCA  50

seq1  CTGAAGGTGAGCCCACCACACCCTGCTCTACTTCCTACCTTCCCTTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGTGAGCCCACCACACCCTGCTCTACTTCCTACCTTCCCTTCCAA  100

seq1  AAATAAGGTCAGCACCAGCTTCTCTCCTCTCCATGATTTGACACTTAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGTCAGCACCAGCTTCTCTCCTCTCCATGATTTGACACTTAGGC  150

seq1  CTTAGGCCTCACACATCCCAAAGATGCTGTGGCAACCCACTCCACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCCTCACACATCCCAAAGATGCTGTGGCAACCCACTCCACACACA  200

seq1  CAAACAGACCAAAAGACATTTATAGGCGTCGGGGACAATGGGGAGGTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGACCAAAAGACATTTATAGGCGTCGGGGACAATGGGGAGGTAGA  250

seq1  GAACTGCTGAGTCAAAGTTGAAGCATTGTTAAATGTTACCTCCGTCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTGAGTCAAAGTTGAAGCATTGTTAAATGTTACCTCCGTCCCTC  300

seq1  CCCAGACACAAAGTAGTAATCATAATTTATGTGGCTGTATTTCCCCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACACAAAGTAGTAATCATAATTTATGTGGCTGTATTTCCCCATGT  350

seq1  CTAAGTATATAAGCCCAGGGGAATTAACCTAAGGTCTTAAAGATTCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTATATAAGCCCAGGGGAATTAACCTAAGGTCTTAAAGATTCAGAG  400

seq1  GGCTAAAACTTTACTTCCAGTATATCAAGATCACATGTAACCAGTTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAACTTTACTTCCAGTATATCAAGATCACATGTAACCAGTTTCAA  450

seq1  AACTATTATCTGAAGTTGCCTGTGGGGTTGGAGATTCTGTCTGATTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTATCTGAAGTTGCCTGTGGGGTTGGAGATTCTGTCTGATTCAAA  500

seq1  CCAACAGCAAATACTAAAACATCACCCCAAATAAGGTTATCATTTTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGCAAATACTAAAACATCACCCCAAATAAGGTTATCATTTTGTGT  550

seq1  ATGTCTTTATGATCATGGGAATTCTAGGTTTGATGATTTCTTATGTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTATGATCATGGGAATTCTAGGTTTGATGATTTCTTATGTGTTT  600

seq1  TATTCTCTGGATTCCAGAGGAACTAAGATGTAACCAAAGACACCCTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTGGATTCCAGAGGAACTAAGATGTAACCAAAGACACCCTAAAT  650

seq1  ACCTTCTTCCAAGTATTTTGTCAAGTCCATTCTAAAGGCCTAAGGCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTCCAAGTATTTTGTCAAGTCCATTCTAAAGGCCTAAGGCAGTT  700

seq1  TTTTTTTTTTCCTCAAGACAGGGTTTCTCTGAAACTCAGAAATCCGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCCTCAAGACAGGGTTTCTCTGAAACTCAGAAATCCGCCTG  750

seq1  CCTCTGCTCCCCAAGTGCTGGGATTAAAGGCGTGAGCCACCACTGCCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTCCCCAAGTGCTGGGATTAAAGGCGTGAGCCACCACTGCCAAG  800

seq1  TCTAAGACAGTTTTTATCAAGTGAATTTTAATTTTTAAAATGTTAAAGAG  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTAAGACAGTTTTTATCAAGTGAATTTTAATTTTTAAAATGTT-AAGAG  849

seq1  CCGGGCATGGTTACACACACCTTTAATCCCAGCACTCTGGAACGCTGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCATGGTTACACACACCTTTAATCCCAGCACTCTGGAACGCTGAGG  899

seq1  TGGGCGGATCTCTCAGGCCAGCCTGG-TCTAAGGGAGTACCA-GGACAGC  948
      |||||||||||||||||||||||||| ||||||||||||||| |||||||
seq2  TGGGCGGATCTCTCAGGCCAGCCTGGTTCTAAGGGAGTACCAGGGACAGC  949

seq1  CAAAGCTACACAGAAAGCCCCAAAAATAAGGGGGTAAGGG-AGGGAAAGA  997
      | ||||||||| ||||| |||||||||||||||||||||| |||||||| 
seq2  C-AAGCTACACTGAAAGGCCCAAAAATAAGGGGGTAAGGGAAGGGAAAG-  997

seq1  ACTGGAAAGAGAAAACAGTAAAGTTATCTGTCCAAGTGGCAGACAACT-G  1046
      ||||||||||||||||||| ||||||||||| | ||| |||||||||| |
seq2  ACTGGAAAGAGAAAACAGT-AAGTTATCTGT-CTAGT-GCAGACAACTGG  1044

seq1  TTAGGAG-AGTAAAGATCATTTAAGAAATGCTTATAATCCTAAA  1089
      ||||||| |||  ||||||||  |||||||||||||||||||||
seq2  TTAGGAGAAGT--AGATCATT--AGAAATGCTTATAATCCTAAA  1084