BAC Information

Click to search

BAC

Clone NameB6Ng01-230L13
Chromosome10 (Build37)
Map Location 15,817,811 - 15,818,378
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439
Downstream geneLOC382457, LOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230L13.bB6Ng01-230L13.g
ACCGA043513GA043514
length724967
definitionB6Ng01-230L13.b B6Ng01-230L13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaacaggtgttggattttg
tcaaatgatttctcagcatctaatgagataatcatatggatcttttttct
ttgagtttgtttatatagtggattatgttgatggattcccatatattgaa
tcatctctgcatcactgggataaagcctacttgatcatgatggataatca
ttttgatgtgttcttggattcagtttgtgagaatgttattgaacattttt
gcatcaatattcataagggaaattggttgaagttctttcttttcttgttg
gatctttgtgttgtttaggtatcagagtgattgtgacttcatagaacgaa
ttgggcagtgcaccttctgtttctattttgtggaatagtttgcagagtat
tggaattaggtcttctttgaagatctgatagaactctgcactaaacacat
ctggtcctgggcttttttttttttttttttttgtttgtgagactattaat
gattgttgctatttctttaagggatatgagactgtttagatagtttatct
gatcctgatttaactttggtacctggcatctctctagaaaattgtcagtt
tcatccaggttttccagttgggttgagtataggatcttgtagtatgattt
gatatattttgggattttcctcagtttctgttgttatgtttcccttttcc
ttttctgattttgctaaattaaga
gaattccctggaagtagattatcaaaaacaagcaaaactaaatatttaca
accccaggacagatttatgactttgtttgtttgtttgttttgttttgttt
tgttttgttttgttttgtttttctcgagacagggtttttccggatagccc
tggctgtcctggaactcattttgtaaaccaggttggcatcgaactcagaa
atccacctggctctgcctcccgagtgctggcagtaaaggcatgcaccacc
aattttgaataaaagaatacagttggtgcaaatatttgcccctttgaaga
catggataattgattttaaaacaatataaataggttgaagacttcgtggc
cgactcatttgccgaattacaggagatggcttagttcagcctccttattt
ctaattatcaagagtattagccctagctaatactatggtcagcctcttag
attcctgggaatttccatcatacaagttccctatttcatctcccagatgt
ctccaattacagttgtctctccaagtactctctccctcctcccttctgca
tcctggtccctcatgttcctatccctatctgtccctggtccacctgaaaa
gtgtgttctatttctccttccaaagggtattcatatgttctctcctaagc
cctccttaatatttagcttttctgcctctgtttattatagcaagattatc
agttatgttagttaattcccagtgttttatctttctgggtctcggttact
tcactcattatattattttctagttccatccatttgttatgttttgagat
aaatcagttccctaggttctgaaacatcactatattgattttcaacgtgg
ctgtacaagtttacacttctatcagcagtggattaagtgttccctttgct
tcggtatactttaccagcatggacgtgagactatgttttttgattcctgg
gccatttctgaacaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15817811_15818378
seq2: B6Ng01-230L13.g_69_636 (reverse)

seq1  GAACATGAGGGACCAGGATGCAGAAGGGAGGAGGGAGAGAGTACTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAGGGACCAGGATGCAGAAGGGAGGAGGGAGAGAGTACTTGGAG  50

seq1  AGACAACTGTAATTGGAGACATCTGGGAGATGAAATAGGGAACTTGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACTGTAATTGGAGACATCTGGGAGATGAAATAGGGAACTTGTATG  100

seq1  ATGGAAATTCCCAGGAATCTAAGAGGCTGACCATAGTATTAGCTAGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATTCCCAGGAATCTAAGAGGCTGACCATAGTATTAGCTAGGGCT  150

seq1  AATACTCTTGATAATTAGAAATAAGGAGGCTGAACTAAGCCATCTCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCTTGATAATTAGAAATAAGGAGGCTGAACTAAGCCATCTCCTGT  200

seq1  AATTCGGCAAATGAGTCGGCCACGAAGTCTTCAACCTATTTATATTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGGCAAATGAGTCGGCCACGAAGTCTTCAACCTATTTATATTGTTT  250

seq1  TAAAATCAATTATCCATGTCTTCAAAGGGGCAAATATTTGCACCAACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAATTATCCATGTCTTCAAAGGGGCAAATATTTGCACCAACTGT  300

seq1  ATTCTTTTATTCAAAATTGGTGGTGCATGCCTTTACTGCCAGCACTCGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTATTCAAAATTGGTGGTGCATGCCTTTACTGCCAGCACTCGGG  350

seq1  AGGCAGAGCCAGGTGGATTTCTGAGTTCGATGCCAACCTGGTTTACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGCCAGGTGGATTTCTGAGTTCGATGCCAACCTGGTTTACAAAA  400

seq1  TGAGTTCCAGGACAGCCAGGGCTATCCGGAAAAACCCTGTCTCGAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCCAGGACAGCCAGGGCTATCCGGAAAAACCCTGTCTCGAGAAAA  450

seq1  ACAAAACAAAACAAAACAAAACAAAACAAAACAAACAAACAAACAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAAACAAAACAAAACAAACAAACAAACAAAGTC  500

seq1  ATAAATCTGTCCTGGGGTTGTAAATATTTAGTTTTGCTTGTTTTTGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTGTCCTGGGGTTGTAAATATTTAGTTTTGCTTGTTTTTGATAA  550

seq1  TCTACTTCCAGGGAATTC  568
      ||||||||||||||||||
seq2  TCTACTTCCAGGGAATTC  568