BAC Information

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BAC

Clone NameB6Ng01-230L16
Chromosome10 (Build37)
Map Location 87,133,346 - 87,308,956
singlet/doubletdoublet
Overlap geneLOC100041517, ENSMUSG00000058934
Upstream geneHsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2, 1700113H08Rik, Ascl1, Pah
Downstream geneIgf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik, Gnptab, Sycp3, Chpt1, 8030451F13Rik, LOC667046, LOC627414, LOC100042998, EG435236, Spic, EG237433, Arl1, Utp20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230L16.bB6Ng01-230L16.g
ACCGA043519GA043520
length4941,164
definitionB6Ng01-230L16.b B6Ng01-230L16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,308,457 - 87,308,956)(87,133,346 - 87,134,497)
sequence
ctgtatccctttgtctttgtctgtgccttgtctttttacattcatgtatg
taaatatacattcatgtatgtaaatatatacccttacccatggtttcatt
cacaaaacagtcactatttgtgataggccatatgccaagaactagataaa
gaataaactaaatatacatcattttccctctatgcaactttctatccagg
gcaagaagacagtccttcatttgctactcatgctaataagtggatgctta
ccagctgagctacatgccctatggaatatttctactgttatttcttatat
atttcttatatgcttttaagcaagataacaaaggcacctgatcaaatgtg
acctgagaagaggacacaatgacacagaggcaaatatatgcgcaaattcg
ctcaatatctgctttcaaccttctccctaccaggttccaagcagttggct
ggtgtgtatatgtgtgttatgtgtgtgtgtggtctgtgtatgtg
gaattccataaaggagacctgagttgctgtcactccctcattgaccactc
taccccaagaatttcagaagacacaaatcctaggaaccttatatgctaac
tattgacatgtttggccctcattaacttttgagcagctgcatcatcccta
cccgaatactggctaaaaatgtagcaccccagaagcagactttcatttct
taagaccatcaggtcatccatgtccacattagaacttgagaagcactgtt
gtactatgtgtgatgttccaatggtttgttccaaatggtctagagaattc
tagaagttgaagaaaagttgtgagctttggaaattgtctatcctgtcagt
cccaggtgagtagcagacacagaagtttcccaatctccatagcatcagaa
ctcatctgtagcacggagttaatgacccctgccaaatgaagacaccctga
gattgatgaagtacttaagtacagaacccacccacccatcagtggacatg
ttgctgttcctggcatacaacataggctgaaatgttgtgatgactgcaga
ctttggaggacattgtccaggaaacgtgatttttaaccttaaggaattta
aagtctagaaggagacaaagtaagcacataagaagttgaaggaaatgaaa
gatgattattacaaaggattgttccctgagccatgggttctataagaatt
atgattctaagagtagaaatagtaaacatattacaaagtagagtatgtaa
cttatccaagttcttagtttatgccagacatttattgaacattatctcat
tcccctgtacttcaattattatgtgatatagatgatataaaaatgctttc
tgtttcatattgtgaaagtattttcttttgcaaagtcttattatgaagaa
tgaagaagaattgaacaaggattttgttcagttttctacatatttctaag
tagacggtgcattccctttattatccacagaaaggcttgtgaatgatggt
taactattaggtttcctcagagtcagaagatttaaaatacccttctagga
ggccaccccatgggaagccagccaaagtcgaaaatgggttccattcttca
aggatacccaccttacggctctgaatgtctcgagaaagaagtctacatac
gttcggtcttcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_87308457_87308956
seq2: B6Ng01-230L16.b_48_547 (reverse)

seq1  CACATACACAGACCACACACACACATAACACACATATACACACCAGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACACAGACCACACACACACATAACACACATATACACACCAGCCAA  50

seq1  CTGCTTGGAACCTGGTAGGGAGAAGGTTGAAAGCAGATATTGAGCGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGGAACCTGGTAGGGAGAAGGTTGAAAGCAGATATTGAGCGAATT  100

seq1  TGCGCATATATTTGCCTCTGTGTCATTGTGTCCTCTTCTCAGGTCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCATATATTTGCCTCTGTGTCATTGTGTCCTCTTCTCAGGTCACATT  150

seq1  TGATCAGGTGCCTTTGTTATCTTGCTTAAAAGCATATAAGAAATATATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGGTGCCTTTGTTATCTTGCTTAAAAGCATATAAGAAATATATAA  200

seq1  GAAATAACAGTAGAAATATTCCATAGGGCATGTAGCTCAGCTGGTAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAACAGTAGAAATATTCCATAGGGCATGTAGCTCAGCTGGTAAGCA  250

seq1  TCCACTTATTAGCATGAGTAGCAAATGAAGGACTGTCTTCTTGCCCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTATTAGCATGAGTAGCAAATGAAGGACTGTCTTCTTGCCCTGGA  300

seq1  TAGAAAGTTGCATAGAGGGAAAATGATGTATATTTAGTTTATTCTTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTTGCATAGAGGGAAAATGATGTATATTTAGTTTATTCTTTATC  350

seq1  TAGTTCTTGGCATATGGCCTATCACAAATAGTGACTGTTTTGTGAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTGGCATATGGCCTATCACAAATAGTGACTGTTTTGTGAATGAA  400

seq1  ACCATGGGTAAGGGTATATATTTACATACATGAATGTATATTTACATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGTAAGGGTATATATTTACATACATGAATGTATATTTACATACA  450

seq1  TGAATGTAAAAAGACAAGGCACAGACAAAGACAAAGGGATACAGGAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTAAAAAGACAAGGCACAGACAAAGACAAAGGGATACAGGAATTC  500

seq1: chr10_87133346_87134497
seq2: B6Ng01-230L16.g_68_1231

seq1  GAATTCCATAAAGGAGACCTGAGTTGCTGTCACTCCCTCATTGACCACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAGGAGACCTGAGTTGCTGTCACTCCCTCATTGACCACTC  50

seq1  TACCCCAAGAATTTCAGAAGACACAAATCCTAGGAACCTTATATGCTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCAAGAATTTCAGAAGACACAAATCCTAGGAACCTTATATGCTAAC  100

seq1  TATTGACATGTTTGGCCCTCATTAACTTTTGAGCAGCTGCATCATCCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACATGTTTGGCCCTCATTAACTTTTGAGCAGCTGCATCATCCCTA  150

seq1  CCCGAATACTGGCTAAAAATGTAGCACCCCAGAAGCAGACTTTCATTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAATACTGGCTAAAAATGTAGCACCCCAGAAGCAGACTTTCATTTCT  200

seq1  TAAGACCATCAGGTCATCCATGTCCACATTAGAACTTGAGAAGCACTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCATCAGGTCATCCATGTCCACATTAGAACTTGAGAAGCACTGTT  250

seq1  GTACTATGTGTGATGTTCCAATGGTTTGTTCCAAATGGTCTAGAGAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATGTGTGATGTTCCAATGGTTTGTTCCAAATGGTCTAGAGAATTC  300

seq1  TAGAAGTTGAAGAAAAGTTGTGAGCTTTGGAAATTGTCTATCCTGTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTTGAAGAAAAGTTGTGAGCTTTGGAAATTGTCTATCCTGTCAGT  350

seq1  CCCAGGTGAGTAGCAGACACAGAAGTTTCCCAATCTCCATAGCATCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTGAGTAGCAGACACAGAAGTTTCCCAATCTCCATAGCATCAGAA  400

seq1  CTCATCTGTAGCACGGAGTTAATGACCCCTGCCAAATGAAGACACCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGTAGCACGGAGTTAATGACCCCTGCCAAATGAAGACACCCTGA  450

seq1  GATTGATGAAGTACTTAAGTACAGAACCCACCCACCCATCAGTGGACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATGAAGTACTTAAGTACAGAACCCACCCACCCATCAGTGGACATG  500

seq1  TTGCTGTTCCTGGCATACAACATAGGCTGAAATGTTGTGATGACTGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTCCTGGCATACAACATAGGCTGAAATGTTGTGATGACTGCAGA  550

seq1  CTTTGGAGGACATTGTCCAGGAAACGTGATTTTTAACCTTAAGGAATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGGACATTGTCCAGGAAACGTGATTTTTAACCTTAAGGAATTTA  600

seq1  AAGTCTAGAAGGAGACAAAGTAAGCACATAAGAAGTTGAAGGAAATGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGAAGGAGACAAAGTAAGCACATAAGAAGTTGAAGGAAATGAAA  650

seq1  GATGATTATTACAAAGGATTGTTCCCTGAGCCATGGGTTCTATAAGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTATTACAAAGGATTGTTCCCTGAGCCATGGGTTCTATAAGAATT  700

seq1  ATGATTCTAAGAGTAGAAATAGTAAACATATTACAAAGTAGAGTATGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTAAGAGTAGAAATAGTAAACATATTACAAAGTAGAGTATGTAA  750

seq1  CTTATCCAAGTTCTTAGTTTATGCCAGACATTTATTGAACATTATCTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCAAGTTCTTAGTTTATGCCAGACATTTATTGAACATTATCTCAT  800

seq1  T-CCCTGTAC-TCAATTA-TATGTGATATAGATGATATAAAAATGCTTTC  847
      | |||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  TCCCCTGTACTTCAATTATTATGTGATATAGATGATATAAAAATGCTTTC  850

seq1  TGTTTCATA-TGTG-AAGTATTT--CTTTGCAAAGTCTTATTATGAAGAA  893
      ||||||||| |||| ||||||||   ||||||||||||||||||||||||
seq2  TGTTTCATATTGTGAAAGTATTTTCTTTTGCAAAGTCTTATTATGAAGAA  900

seq1  TGAAGAAGAATTGAACAAGGA-TTTGTTCAG-TTTCTACATATTTCTAAG  941
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  TGAAGAAGAATTGAACAAGGATTTTGTTCAGTTTTCTACATATTTCTAAG  950

seq1  TAGAC-GTGCATTCCCTTTATTATCCACAG-AAGGC-TGTGAATGAT-GT  987
      ||||| |||||||||||||||||||||||| ||||| |||||||||| ||
seq2  TAGACGGTGCATTCCCTTTATTATCCACAGAAAGGCTTGTGAATGATGGT  1000

seq1  TAACTATAAG--TTTCTCAGAGTCAGAGGATT--AAATACCTTCCTAG--  1031
      ||||||| ||  || |||||||||||| ||||  ||||||| | ||||  
seq2  TAACTATTAGGTTTCCTCAGAGTCAGAAGATTTAAAATACCCTTCTAGGA  1050

seq1  AGCCACACAATGGGAAGCCAG-CAAAGTC-AAAATGGTGTCCCATTTCTC  1079
       ||||| | |||||||||||| ||||||| ||||||| || |||||  ||
seq2  GGCCACCCCATGGGAAGCCAGCCAAAGTCGAAAATGG-GTTCCATTCTTC  1099

seq1  AAAGATACCCACCTTACAGCTCTG-ATGTCTCAGAGAAAGAAATCCCTAC  1128
      || |||||||||||||| |||||| ||||||| ||||||||| |  ||||
seq2  AAGGATACCCACCTTACGGCTCTGAATGTCTC-GAGAAAGAAGT--CTAC  1146

seq1  ATATAATCATTTCTGGTCTTCTTT  1152
      |||   ||      ||||||||||
seq2  ATACGTTC------GGTCTTCTTT  1164