BAC Information

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BAC

Clone NameB6Ng01-231B13
Chromosome10 (Build37)
Map Location 10,320,080 - 10,443,361
singlet/doubletdoublet
Overlap geneEG382450, Grm1
Upstream geneE130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238, LOC665110, 9130014G24Rik, Rab32
Downstream geneShprh, Fbxo30, Epm2a, EG666732, LOC100039343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231B13.bB6Ng01-231B13.g
ACCGA043787GA043788
length1,0711,055
definitionB6Ng01-231B13.b B6Ng01-231B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,442,301 - 10,443,361)(10,320,080 - 10,321,141)
sequence
gaattctaagtacttagccggttttttttttttttactgatttttatttt
atcaactttgctgaccaaatgatggcaaatttcatttactataaggactc
agattgggacacgaaatttatagtacggacaggactgctttattgcttat
cccccctgaaggattccctttttatttttaatatatcaaacagagaaaga
cttcaaatcgagggctatggttccttgggctcttttctctttggatctat
atgtgcctatgttgcaaatttgaataaagcagaggctatccttcttttct
gcagatggacttgcgagaatgaaagtcctggggaagtctacatttatatg
cagagatctaatccttttttctgtgtggtatgttttctacaaggattctg
aggaaggagctatttcataaattgcatttaatatgttggtgttttcatat
ctagtggagttctgatttaatctcattccacaccagaactatcgtgtctc
tttgaaaaaaattcattccatctactaagtttctcccacttgaccccaga
aagtataatctttttaagaatactcttaaactgggagataggctttggga
caaagggttgtttttttctatcagtatgactttattaatacaaggtacta
aagattcattaagttgaaatagtgtacaggactgctccttttagaaagtt
tgaagacagaactcttgagtgttggtgctgctcatgggctaaaatcataa
atggagtcatgaatattagccctttattttttccttcctgacttagaagt
acagttggacttgaactaggatcacccctcctactactcttcaaagattg
cagtgacaaatgagagtgaaaacctgttacttactttacttagtcgagta
gcctcagtaattctaaacctgactacccttagctggggttggatcatgac
tatattccacatacgtgtcctcactctggtcttagagaaccaaagccgtt
aaatacataaaaccaagccaggtgtaccccattcgaaaagaaaaaaaatc
ttcatgaaaataagttctgta
gaattccacatccagttttaaaactgcaatgtttattcaattgcttggat
attggaagataagtggaaaaggttagagaaaagatttcaagatacctctt
ttctgtgcaagtcctttgaaaatatcatttgcgaaggtatgaatatttgc
ctagctttgatggactgatgtgatgcactcgcgtaaagaacacatcacct
ggcaggcatatttgtggtgggctatagtcctgtcttaagctattattttt
accttttcaaatttaatttgagatattaattggtaaagcacatattcact
ttaagaataacaatgacttgccacattaatgggaataacaccagaaagaa
attatagtagataatagttcagaatctctggagataatattagatatcat
ttcatgaatatttgccatgcggcacatattatttaaaaccatgtgcatgg
attaaaacagttaacagccctttaatatggacacttgaaccctatgatga
caggagatggcagatttctgacaccagctcagagacctagtcctgcgttc
cctgaccttcctgatttggaggagctcagtattcatttatcagtagttta
aaaggcactgggagacggctgtgtatttattatccaggtataataatttg
tggactggagatatctgtcctcaagagggcaagcttgtcaaaacctgaca
tgctgagctgtgacagaaaatatcctgtgatgcacaatgaattgaaccca
cgcatttgccagagagtaaagaagcatgaagcaccccccacacacactcc
gggaatttccagtgagcatggagaggagactagtgggtcactaagctcaa
gtgggtttcagaagtggcacatcttagtttaaattaatggtggcttatat
atctatatgacaaaatgcttctgtcaatggttgtcatactgacagagtaa
ttgtcacacttctcttatctaggactctccacaaaagaattaaattacat
tttacatcaattagtttccgttctatatggatgggcattgtgcatgcatt
ttagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_10442301_10443361
seq2: B6Ng01-231B13.b_38_1108 (reverse)

seq1  TACAG-ACTTA-TTTCATG--TGTTTTTTTTTTTTTTGGATGGGGTACA-  45
      ||||| ||||| |||||||    |||||||| |||| | |||||||||| 
seq2  TACAGAACTTATTTTCATGAAGATTTTTTTTCTTTTCGAATGGGGTACAC  50

seq1  CTGGTTTGGTTTTATTTATTTACTGGTTTGGCTTATC-AAAACCAGA-TG  93
      |||| |||||||||| ||||||  || || | || || || |||||| ||
seq2  CTGGCTTGGTTTTATGTATTTAACGGCTTTGGTTCTCTAAGACCAGAGTG  100

seq1  GAGACATGTATGTAGAATATAG-CATGATCCAA-GCCAGCTCTGGGTAGT  141
        |||| |||||| |||||||| ||||||||||  ||||||  |||||||
seq2  AGGACACGTATGTGGAATATAGTCATGATCCAACCCCAGCTAAGGGTAGT  150

seq1  CATGTTTAGAAATAATTAGGCTAGT-GACTAAGAAAAGTAAGTAACAGGT  190
      || |||||||| || | |||||| | ||||||| ||||||||||||||||
seq2  CAGGTTTAGAATTACTGAGGCTACTCGACTAAGTAAAGTAAGTAACAGGT  200

seq1  GGTCACTCTCATTTGTAACTGCAGTATTTGAAGAGTAGTAGGAGGCTTGT  240
        |||||||||||||| |||||| | |||||||||||||||||||  || 
seq2  TTTCACTCTCATTTGTCACTGCAATCTTTGAAGAGTAGTAGGAGGGGTGA  250

seq1  TCTTAGTTCAAGTCCAACTTAAATTCCAAGTCAGGAAGGAAAAAATAAAG  290
      || ||||||||||||||||  | ||| |||||||||||||||||||||||
seq2  TCCTAGTTCAAGTCCAACTGTACTTCTAAGTCAGGAAGGAAAAAATAAAG  300

seq1  GGCTAAAAATCATGAC-CAACTAATGATTTTACTCCATGAGCAGCACCAA  339
      |||||| | ||||||| | | | |||||||||  ||||||||||||||||
seq2  GGCTAATATTCATGACTCCATTTATGATTTTAGCCCATGAGCAGCACCAA  350

seq1  CACTCAAGAGTTCTGTCTTCAAAC-TCCTAAAAGGAGCAGTCCTTTAAAC  388
      |||||||||||||||||||||||| | ||||||||||||||||| || ||
seq2  CACTCAAGAGTTCTGTCTTCAAACTTTCTAAAAGGAGCAGTCCTGTACAC  400

seq1  TATTTCAACTTAATGAATCTTTAGTACCTTGTATTAATAAAGTCATACTG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAACTTAATGAATCTTTAGTACCTTGTATTAATAAAGTCATACTG  450

seq1  ATAGAAAAAAACAACCCTTTGTCCCAAAGCATAACTAACAGTTTAAGAGT  488
      |||||||||||||||||||||||||||||| || ||  ||||||||||||
seq2  ATAGAAAAAAACAACCCTTTGTCCCAAAGCCTATCTCCCAGTTTAAGAGT  500

seq1  ATTATTAAAAAGACTATACTTTCTGGGGTCAAGTGGTAGAAACTTAGTAG  538
      ||| ||||||||| |||||||||||||||||||||| |||||||||||||
seq2  ATTCTTAAAAAGATTATACTTTCTGGGGTCAAGTGGGAGAAACTTAGTAG  550

seq1  ATGGAATGAATTTTTAGCAAAGAGACACTATAGTTCTTGTCTTGTACGTG  588
      |||||||||||||||  ||||||||||| |||||||| || | | | | |
seq2  ATGGAATGAATTTTTTTCAAAGAGACACGATAGTTCTGGTGTGGAATGAG  600

seq1  ATCAAATCAGAACTCCACTAGATATGAAAACACCAACATATTAAATGCAA  638
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCAGAACTCCACTAGATATGAAAACACCAACATATTAAATGCAA  650

seq1  TTTAAGAAATAGCTCTTGCCTCAGAATCCCTGTAGAAAACATACCACACA  688
      |||| |||||||||| | ||||||||||| ||||||||||||||||||||
seq2  TTTATGAAATAGCTCCTTCCTCAGAATCCTTGTAGAAAACATACCACACA  700

seq1  GAAAAAAGGATTAGAACTCTGTATATAAATGTAGACTTCCACAGGACCTA  738
      ||||||||||||||| ||||| |||||||||||||||||| |||||| | 
seq2  GAAAAAAGGATTAGATCTCTGCATATAAATGTAGACTTCCCCAGGACTTT  750

seq1  CATTCTCACAAGTCCATCTGCAGAAAAGAAGGCTAGCCTCTGCTTTATTC  788
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  CATTCTCGCAAGTCCATCTGCAGAAAAGAAGGATAGCCTCTGCTTTATTC  800

seq1  AAATCTGCAACATAGGCACATATAGAGCCAAAGAGAAAAGAGCCCAAGGA  838
      |||| ||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAATTTGCAACATAGGCACATATAGATCCAAAGAGAAAAGAGCCCAAGGA  850

seq1  ACAATAGCCCTTGATTTGATGTCTTTCTCTGTGTGATATATTAAAAATAA  888
      || |||||||| ||||||| |||||||||||| |||||||||||||||||
seq2  ACCATAGCCCTCGATTTGAAGTCTTTCTCTGTTTGATATATTAAAAATAA  900

seq1  AAAGGGAATCCTTTAGGGTTGATAAGCAATAAAGCAGTCCTGTCCATATT  938
      ||||||||||||| ||||  ||||||||||||||||||||||||| || |
seq2  AAAGGGAATCCTTCAGGGGGGATAAGCAATAAAGCAGTCCTGTCCGTACT  950

seq1  ATAAATATTGTGTCCCAATCTAAGTCCTTATAGTAACTGAAATTTACCAT  988
      |||||| | |||||||||||| |||||||||||||| |||||||| ||||
seq2  ATAAATTTCGTGTCCCAATCTGAGTCCTTATAGTAAATGAAATTTGCCAT  1000

seq1  CATTTGGTCTGCAAAGTTGATAAAATAAAAATCAGTAAAAAAAAAAAAAA  1038
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGTCAGCAAAGTTGATAAAATAAAAATCAGTAAAAAAAAAAAAAA  1050

seq1  TATGGCTTGTGTACTTAGAATTC  1061
         ||| |  |||||||||||||
seq2  -CCGGC-TAAGTACTTAGAATTC  1071

seq1: chr10_10320080_10321141
seq2: B6Ng01-231B13.g_65_1119

seq1  GAATTCCACATCCAGTTTTTAAACTGCAATGTTTATTCAATTGCTTGGAT  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAATTCCACATCCAGTTTTAAAACTGCAATGTTTATTCAATTGCTTGGAT  50

seq1  ATTGGAAGAGTAAGTGGAAAAGGTTAGAGAAAAGATTTCAAGATACCTCT  100
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAGA-TAAGTGGAAAAGGTTAGAGAAAAGATTTCAAGATACCTCT  99

seq1  TTTCTGTGCAAGTCCTTTAAAAATATCATTTGCGAAGGTATGAATATTTG  150
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTCTGTGCAAGTCCTTTGAAAATATCATTTGCGAAGGTATGAATATTTG  149

seq1  CCTAGCTTTGATGGACTGATGTGATGCAGTCAGCGTAAAGAACACATCAC  200
      |||||||||||||||||||||||||||| || ||||||||||||||||||
seq2  CCTAGCTTTGATGGACTGATGTGATGCACTC-GCGTAAAGAACACATCAC  198

seq1  CTGGCAGGCATATTTATGGTGGGCTATAGTCCTGTCTTAAGCTATTAGTT  250
      ||||||||||||||| ||||||||||||||||||||||||||||||| ||
seq2  CTGGCAGGCATATTTGTGGTGGGCTATAGTCCTGTCTTAAGCTATTATTT  248

seq1  TTACCTTTTCAAATTTAATTTGAGATATTAGTTGGTAAAGCACATATTCA  300
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTACCTTTTCAAATTTAATTTGAGATATTAATTGGTAAAGCACATATTCA  298

seq1  CTTTAAGAATAACAATGACTTGCCTCATTAATGTGAATAACACCAGAAAG  350
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  CTTTAAGAATAACAATGACTTGCCACATTAATGGGAATAACACCAGAAAG  348

seq1  AAATTATAGTAGATAATAGTTCAGAATCGCTGGAGATAATATTAGATATC  400
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAATTATAGTAGATAATAGTTCAGAATCTCTGGAGATAATATTAGATATC  398

seq1  ATTTCATGAATATTTGCCATGCAGCACATATTATTTAAAACCATGTGCAT  450
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATTTCATGAATATTTGCCATGCGGCACATATTATTTAAAACCATGTGCAT  448

seq1  GGATTAAAACAGTTAACAGCCCTTTAATATGGACACTTGAACCCTATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAACAGTTAACAGCCCTTTAATATGGACACTTGAACCCTATGAT  498

seq1  GACAGGAGATGGCAGATTTCTGACACCAGCTCAGAGACCTAGTCCTGCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAGATGGCAGATTTCTGACACCAGCTCAGAGACCTAGTCCTGCGT  548

seq1  TCCCTGACCTTCCTGATTTGGAGGAGCTCAGTATTCATTTATCAGTAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGACCTTCCTGATTTGGAGGAGCTCAGTATTCATTTATCAGTAGTT  598

seq1  TAAAAGGCACTGGGAGACGGCTGTGTATTTATTATCCAGGTATAATAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGCACTGGGAGACGGCTGTGTATTTATTATCCAGGTATAATAATT  648

seq1  TGTGGACTGGAGTTATCTGTCCTCAAGAGGGCAAGCTTGGCAAAACCAGA  700
      |||||||||||| |||||||||||||||||||||||||| ||||||| ||
seq2  TGTGGACTGGAGATATCTGTCCTCAAGAGGGCAAGCTTGTCAAAACCTGA  698

seq1  CATGCTGAGCTGTGACAGAAAATATCCTGTGATGCACAATGAATTTAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATGCTGAGCTGTGACAGAAAATATCCTGTGATGCACAATGAATTGAACC  748

seq1  CAGGCATTTCCCAGAGAGTAAAGAAGCATGAAGCACCCCCCACACACACA  800
      || |||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  CACGCATTTGCCAGAGAGTAAAGAAGCATGAAGCACCCCCCACACACACT  798

seq1  CCGGGAATTTCCAGTGAGCATGGAGAGGAGACTTGGGGGTCAATAAGCTC  850
      ||||||||||||||||||||||||||||||||| | |||||| |||||||
seq2  CCGGGAATTTCCAGTGAGCATGGAGAGGAGACTAGTGGGTCACTAAGCTC  848

seq1  AAGTGGGTTTCAAGAAGTGGTACATCTTA-TTTAAATTAATTGGTGGCTT  899
      ||||||||||| |||||||| |||||||| |||||||||| |||||||||
seq2  AAGTGGGTTTC-AGAAGTGGCACATCTTAGTTTAAATTAA-TGGTGGCTT  896

seq1  ATATATTCTATATGACAAAATGCTTCTGTCAAATGGTTGTCATAACTGAA  949
      ||||| |||||||||||||||||||||||| |||||||||||| |||| |
seq2  ATATA-TCTATATGACAAAATGCTTCTGTC-AATGGTTGTCAT-ACTG-A  942

seq1  CAGAGGAATTGTCAACACTTTCTTTATCTAGGTACTCTCCACAAAAG-AT  998
      ||||| ||||||| ||||||   ||||||||| |||||||||||||| ||
seq2  CAGAGTAATTGTC-ACACTTCTCTTATCTAGG-ACTCTCCACAAAAGAAT  990

seq1  TAAAATACATTTTACAT-AATTTATTTCCTTCTTATATGTATGGGAATTG  1047
      |||| |||||||||||| ||||  ||||| |  |||||| ||||| ||||
seq2  TAAATTACATTTTACATCAATTAGTTTCCGTTCTATATGGATGGGCATTG  1040

seq1  TGCATGCATTTTAGT  1062
      |||||||||||||||
seq2  TGCATGCATTTTAGT  1055