BAC Information

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BAC

Clone NameB6Ng01-231G08
Chromosome10 (Build37)
Map Location 91,981,554 - 91,982,330
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041799, LOC667203
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231G08.bB6Ng01-231G08.g
ACCGA044009GA044010
length981700
definitionB6Ng01-231G08.b B6Ng01-231G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacgcagttgaatccttctcaacagtctgttttacgggaacactt
cattaccaccattccccagctgaagagttctgaattcactcagttgaatc
cttctcaacagtctgttttatgggaacctttatgaccatgacccgcagtt
ctgattccggaatgagggatcttccttgcgccggtgatggtaaccgtccc
gggttttctcatcccaggatttctcgtcccgggttttctcgtctcaggtt
ttctcgtcccaggttttctcgtcccaggtcttctcgtcccaggatttctc
gtcccaggtcttctcgtcccgggtctcagcaccaactcttacacgcgttc
tcgcaaccggccaggaaagacgcaacaaaccggaatcttctgcggcaaag
ctttattgcttacatcttcaggagccagagagcaagagagcaagagagca
agagcaagaaagcaagaaaaagaacaagaacaagaaagcaagagaaagaa
aaagaatggcaaaaccctgtcccttttaaggagaattatcctccgcctag
gacgtattactccctgattggctgcagcccatcggcccagttgtcatcac
gggaaaggtagaacacatggcgggaaaactgcccctgcacgtgtgcagat
tatgtttactacttagaacacagctgtcagcgccatcttataatggcaaa
tgtgagggcggctcctcacaatttcccaagttccttccagataatctttc
ccttcctgcccacccaacttacaggcttttttttcctaaaagcaaacaaa
taaaaggtaattttaaacattttattacaatttacaatagttttgaaact
aaatagaattacagaatccagtacaaaatacccagatgaagttagtggct
atggcctaagagatgatgaggcagctatttgacttcttctttttcctgaa
taaaacatagtaatttctgggcaggaattct
gaattctcaaaagaggaaactcaaatgactgagaaacacatttatgtatc
cttagacataagggaaatgtaagtaaaagctactttgagatttcatttca
catctgtcagaatggctagtatcaatatatatatatgtcactgcttatgc
tggaaaagggtacagagcaagtagaagtttcattcaatcctggtgaaagg
gcatacttacacagcttctataggagtcagtgtggtggttccttgagatg
atggggatcattcagccccaaactccagctagaccaccactcacggacat
atatccaaaagatgcttcatccttccaaggagacatttgcagaatcatgt
ttattactgaccttttcatagcataagaagttgggaacaaaataaatctc
tctctgtagaagtacagataaaagaaatgtatgttacattgaaatattac
tcagctattaaaataaggacatcatgaaatttgcatgaaaaaaattgtcg
tgaattttatacctcatcccagaaatataaatatggtatatatggtctta
ctgtggatatgagctcttaagttaatggcaattatgctataatccttaga
acttcaaatgttaggtagagagtaagagccttagaggttcagacaaatct
tttgaggtaaaggaaagatggatgagggtgggttggaataagaggatctg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91981554_91982330
seq2: B6Ng01-231G08.b_47_759 (reverse)

seq1  AGCCGCCCTCACATTTGCCATTATAAGATGGCACTGACAGCTGTGTTCTA  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGCCGCCCTCACATTTGCCATTATAAGATGGCGCTGACAGCTGTGTTCTA  50

seq1  AGTGGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATGTG  100
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATGTG  100

seq1  TTCTACCTTTCTCGTGATGACAACTGGGCCGATGGGCTGCAGCCAATCAG  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTTTCCCGTGATGACAACTGGGCCGATGGGCTGCAGCCAATCAG  150

seq1  GGAGTAATACGTCCTAGGCGGAGGATAATTCTCCTTAAAAGGGACGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGAGTAATACGTCCTAGGCGGAGGATAATTCTCCTTAAAAGGGACAGGGT  200

seq1  TTTGCCATTCTTTTTCTCTCTCTTGTTCTTGCTTTTTCTCTCTCTTGTTC  250
      |||||||                                           
seq2  TTTGCCA-------------------------------------------  207

seq1  TTGCTTTCTTTTTCTCTCTCTTGCTTTCTTGTTCTTTTTCTCTCTCTTGC  300
           |||||||||| |||||||||||||||||||| |||| | ||||||
seq2  -----TTCTTTTTCTTTCTCTTGCTTTCTTGTTCTTGTTCTTTTTCTTGC  252

seq1  TTTCTTGTTCTTGTTCTTTCTCTCTCTCTTGCACTCTTGCACTCTTGCTC  350
      |||||||                  ||||||| ||||||| |||||||||
seq2  TTTCTTG------------------CTCTTGCTCTCTTGCTCTCTTGCTC  284

seq1  TCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCCGG  334

seq1  TTTGTTGCGTTCTTCCTGGCCGGT--CGCGAACGCGTGTAAGAGTTGGTG  448
      ||||||||||  ||||||||||||  || |||||||||||||||||||||
seq2  TTTGTTGCGTCTTTCCTGGCCGGTTGCGAGAACGCGTGTAAGAGTTGGTG  384

seq1  CTGAGACCCGGGACGAGAAGACCCGGGACGAGAAGACCTGGGATGAGAAG  498
      ||||||||||||||||||||||| ||||||||||  ||||||| ||||||
seq2  CTGAGACCCGGGACGAGAAGACCTGGGACGAGAAATCCTGGGACGAGAAG  434

seq1  ACCTGGGACGAGAAATCCCGGGACGAGAAGACCTGGGACGAGAAGACCTG  548
      ||||||||||||||| || |||||||||| ||||| |||||||| ||| |
seq2  ACCTGGGACGAGAAAACCTGGGACGAGAAAACCTGAGACGAGAAAACCCG  484

seq1  GGACGAGAAGACCTGGGACGAGAAAACCTGGGACGGTTACCATCACAGGC  598
      |||||||||  ||||||| ||||||||| ||||||||||||||||| |||
seq2  GGACGAGAAATCCTGGGATGAGAAAACCCGGGACGGTTACCATCACCGGC  534

seq1  GCAAGGAAGATCCCTCATTCCGGAACCAGAACTGCGGGTCACGGTCATAA  648
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  GCAAGGAAGATCCCTCATTCCGGAATCAGAACTGCGGGTCATGGTCATAA  584

seq1  AGGTTCCCGTAAAACAGACTGTTGAGAAGGATTCAACTGCGTGAATTCAG  698
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  AGGTTCCCATAAAACAGACTGTTGAGAAGGATTCAACTGAGTGAATTCAG  634

seq1  AACTCTTCAGCTGGGGAACGGTGGTAATGAAGTGTTCCCGTAAAACAGAC  748
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACTCTTCAGCTGGGGAATGGTGGTAATGAAGTGTTCCCGTAAAACAGAC  684

seq1  TGTTGAGAAGGATTCAACTGCATGAATTC  777
      ||||||||||||||||||||| |||||||
seq2  TGTTGAGAAGGATTCAACTGCGTGAATTC  713