BAC Information

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BAC

Clone NameB6Ng01-232E20
Chromosome10 (Build37)
Map Location 10,109,252 - 10,110,273
singlet/doubletsinglet
Overlap genenone
Upstream geneE130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238, LOC665110
Downstream gene9130014G24Rik, Rab32, EG382450, Grm1, Shprh, Fbxo30, Epm2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232E20.bB6Ng01-232E20.g
ACCGA044673GA044674
length1,2221,025
definitionB6Ng01-232E20.b B6Ng01-232E20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaacactatgaaaataccaaacctaagaataataggaataga
agaaggagaaaattcccagctccaagggccagaaaatattttcataaaat
tcatagaagaaaatttccccaagctaaagaaaacaatgcctataagcata
caagaaccttacactaaataaattggaccagaaaaggaaatcctcctgac
tcacaataatcaaaacactaactttatagaacaaagaaagaatattaaaa
gctgcaaaggaaaaaggccaattaacatataaagatagacatattagaat
tatacctgacttctcaatagagaccctgaaagccagaagggcctgggaag
acgtcttgcaaacccttaagagattacagatttctgcccatattgctata
cccaaaacttttaatcaccatagatggagaaaacagaaaaagcattccac
gacaaaaccaaatttaaacagtatctatctacaaatacagatttgcaaaa
gatactagaaggaaaactccaacccaagaaggttaactacacccaagaaa
acacaggaaatatcattagcaactaacatactagaaaaaccaaaaaaggg
aatctctctctccccacccctctatctctcaacaacaaaatatggattaa
cagtcattggctattaatactctcaacatcaatgcactcaattccccaac
aaacagacacaagctaacagaatgaatatgaaaacaggattcatcattct
tttgcatacaagaaacacatcatcaaagattgatattatctcagaatata
gaataagaaaaagattttccaagaaattggactcaagaagcaagctgtag
tagccattctaatatttcaagaaacagattttcaaccaaaattagtcaaa
agagatgggaaaggacacttcatactcctcaaagaaaaaaatacagcagt
atgatgtcttggttctgaaaatctatgtcctgtaaacaagggttcccatg
ttagtaaaagaaactgaattatacattgaaccccaaacataatagtggag
acagcaacacctgatattaccatagacaggtcatggagaacaaatctaca
ggaatataactaacatgctatgatcaaatggactcagagtattctatagg
acactcaccgaaatgaagaaatatagttctttctagactaccttgtgaac
cagagagagagattctctctcc
gaattcttaagggaatttgcatttgtacaagaaaatgacacagtaatagt
aacttggaatggaaaagatatgtaaggcttttacttacttgcaacttgaa
gtttttgcaaagattttttgggattaaattctatatcatgctttgaaaat
caccattaagaaagtcttgtgtttttataattacagagaaatatttttgg
ttcctcaagatatgatcatactccccaaagtgtacactacactcccgatc
tgtatattgcatgtcattaacaatgacacgttggagcaggtgccaaaagt
gtttcagaaagtggtgcctttcctttacaccaagaacaaggtaggtgaaa
actgtagccccaggtgataaaacagcatccaacagcaaggctggccactc
tgctaggaggatgggtgcccagctccatccctgtacaacgggagagagca
accatttccatttcagaaaaaacacagtacacatgaccaggattgaaacc
aaagccacattaattctgaaaacagaagtggatcccaggagttcttttgg
tcccatactgaaacaagtcaaaggggtgtctctatctcacagggagccgt
gttctcttcagaattccaagggacccatagcacacacacagcccctacct
atagtcttcaaaggtagcatgacttcctcaggccaagaagcagtgtgggc
tgcctgctgaatggatgagagaccctggccttccaccagatgttgcctct
cgccttattttaattccttcatgtttttaatcacattccacattagcgaa
tcatgacaaacttagtggatataggctgaaagccaagagacctgcttttg
ctcctagtttcctttctgtaactctattattttgaaattattcctgtttt
ctatggatgatttttttgttcacttgcttgcttgctttttgtttgtttga
ggttcatttcagcctttcatctcatgcactattttatgaaaattaagaaa
atacttttctaatgaaatgggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_10109252_10110273
seq2: B6Ng01-232E20.g_68_1092 (reverse)

seq1  CCTACC--ATTCATTAGAAAGGTATTT--CTAATTTTCATAAAATAGTGC  46
      ||||||   ||||||||||| ||||||   ||||||||||||||||||||
seq2  CCTACCCATTTCATTAGAAAAGTATTTTCTTAATTTTCATAAAATAGTGC  50

seq1  ATGAGATGAAAGGCTGAAATGAACCTCAAAACAAACAAAAAGCAAGCAAG  96
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGAGATGAAAGGCTGAAATGAACCTC-AAACAAACAAAAAGCAAGCAAG  99

seq1  CAAGTGAACAAAAAAATCATCCATAGAAAACAGGAATAATTTCAAAATAA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAACAAAAAAATCATCCATAGAAAACAGGAATAATTTCAAAATAA  149

seq1  TAGAGTTACAGAAAGGAAACTAGGAGCAAAAGCAGGTCTCTTGGCTTTCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTACAGAAAGGAAACTAGGAGCAAAAGCAGGTCTCTTGGCTTTCA  199

seq1  GCCTATATCCACTAAGTTTGTCATGATTCGCTAATGTGGAATGTGATTAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATATCCACTAAGTTTGTCATGATTCGCTAATGTGGAATGTGATTAA  249

seq1  AAACATGAAGGAATTAAAATAAGGCGAGAGGCAACATCTGGTGGAAGGCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAAGGAATTAAAATAAGGCGAGAGGCAACATCTGGTGGAAGGCC  299

seq1  AGGGTCTCTCATCCATTCAGCAGGCAGCCCACACTGCTTCTTGGCCTGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTCTCATCCATTCAGCAGGCAGCCCACACTGCTTCTTGGCCTGAG  349

seq1  GAAGTCATGCTACCTTTGAAGACTATAGGTAGGGGCTGTGTGTGTGCTAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCATGCTACCTTTGAAGACTATAGGTAGGGGCTGTGTGTGTGCTAT  399

seq1  GGGTCCCTTGGAATTCTGAAGAGAACACGGCTCCCTGTGAGATAGAGACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCTTGGAATTCTGAAGAGAACACGGCTCCCTGTGAGATAGAGACA  449

seq1  CCCCTTTGACTTGTTTCAGTATGGGACCAAAAGAACTCCTGGGATCCACT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTGACTTGTTTCAGTATGGGACCAAAAGAACTCCTGGGATCCACT  499

seq1  TCTGTTTTCAGAATTAATGTGGCTTTGGTTTCAATCCTGGTCATGTGTAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTCAGAATTAATGTGGCTTTGGTTTCAATCCTGGTCATGTGTAC  549

seq1  TGTGTTTTTTCTGAAATGGAAATGGTTGCTCTCTCCCGTTGTACAGGGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTTTCTGAAATGGAAATGGTTGCTCTCTCCCGTTGTACAGGGAT  599

seq1  GGAGCTGGGCACCCATCCTCCTAGCAGAGTGGCCAGCCTTGCTGTTGGAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGGCACCCATCCTCCTAGCAGAGTGGCCAGCCTTGCTGTTGGAT  649

seq1  GCTGTTTTATCACCTGGGGCTACAGTTTTCACCTACCTTGTTCTTGGTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTATCACCTGGGGCTACAGTTTTCACCTACCTTGTTCTTGGTGT  699

seq1  AAAGGAAAGGCACCACTTTCTGAAACACTTTTGGCACCTGCTCCAACGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGGCACCACTTTCTGAAACACTTTTGGCACCTGCTCCAACGTG  749

seq1  TCATTGTTAATGACATGCAATATACAGATCGGGAGTGTAGTGTACACTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTAATGACATGCAATATACAGATCGGGAGTGTAGTGTACACTTT  799

seq1  GGGGAGTATGATCATATCTTGAGGAACCAAAAATATTTCTCTGTAATTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTATGATCATATCTTGAGGAACCAAAAATATTTCTCTGTAATTAT  849

seq1  AAAAACACAAGACTTTCTTAATGGTGATTTTCAAAGCATGATATAGAATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACAAGACTTTCTTAATGGTGATTTTCAAAGCATGATATAGAATT  899

seq1  TAATCCCAAAAAATCTTTGCAAAAACTTCAAGTTGCAAGTAAGTAAAAGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAAAAAATCTTTGCAAAAACTTCAAGTTGCAAGTAAGTAAAAGC  949

seq1  CTTACATATCTTTTCCATTCCAAGTTACTATTACTGTGTCATTTTCTTGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATATCTTTTCCATTCCAAGTTACTATTACTGTGTCATTTTCTTGT  999

seq1  ACAAATGCAAATTCCCTTAAGAATTC  1022
      ||||||||||||||||||||||||||
seq2  ACAAATGCAAATTCCCTTAAGAATTC  1025