BAC Information

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BAC

Clone NameB6Ng01-232I07
Chromosome10 (Build37)
Map Location 106,315,703 - 106,316,747
singlet/doubletsinglet
Overlap genePpfia2
Upstream geneEG667758, EG639162, Olfr1556-ps1
Downstream gene8430416H19Rik, Lin7a, Myf5, Myf6, Ptprq, EG628870
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232I07.bB6Ng01-232I07.g
ACCGA044835GA044836
length1,0441,067
definitionB6Ng01-232I07.b B6Ng01-232I07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatgttctactatgtaactcaggctgtctgagctgctggagaa
aactctcagtagggaagtgtacctggttcattcatgccttccgtgcctct
gggatagtgttgttctttcactgacactcctcccactttctatgattctt
cttagtgagttcgttctttttccaatcactcaacattcatcttctgctta
ttagtttacaatgcatcaaggaaagagatggaaagacagaaagaaaaata
ccaccagaaatctagactactctacttatccaagattatttctacctatt
tcctaggccattttatgattaattattccaatcttacctcatctgtgact
ttagcaaggccaaaaaaattctaaggtttgcaagactaaaagatacacta
ttaatgctcaagagagaagaattcacaataagttcaagtgcatgtgtgat
ttcaagtgcaatctttattgcactcatctattccaactactacctaccta
cgctttcctgaatttgctaatgataaatgaattaaagtatttgtgattca
caaacttgaaccgcaggaagcaagagatttactgaatgagcagcttctcg
tctgaatattcaaatctaaacttggctggtttaaaaattaaaaaacagag
gtcctaacttttagcagactgtatagactccattgggtcaattgaaaagg
ttagtctccactatttgaattaacacaccacacacacacacaaaccgcaa
agacacacaaacacacacacatagacacaaagatacacacaaacacagag
ataaaaataaaacatgcaaacgcacagacacacatacaaactcacacata
tacacacaaacacagagatacaaataaaacacatggaaacacacagacac
acatacaaactcacacatatacacacagagatacacacaaacacacacag
acattcacacacaggacacagaaaaaatacaccacagagaacacacagac
atgcacgcacacaccacacacatacacagacacacacacacaca

gaattctctctagagttctgtaccccatttttaattgggttatttggact
gttggtgtttaacttcttgagttctttgtaaattttggttataagcattc
tgtcagatgtagggctagtaaagatcactttccaatatgtaaactgtcat
tttgtcctattgacagtgtcctttgccttacagaagctttgcagtttcat
gaagtcccatttatctattgttgatcttagagcctgagacattggtgttc
tgctcaggaaattgtgttctgtaccaacatgttcaagggtattttccact
ttctcttctataaaattcatagtatctcgttatatgtttaagttcttgat
ccacttggatttgagttttgtgcagggtgataaatatggatctattttca
ttcttctacatgtagacatacagttagtccagcatcaattgttgaagatg
ttttaactcttccattgcatgcttttggattgtttatcaaaaattaaatg
tctatagatgggttggtttatttatggatcttcagtttattccattgatc
aatttgtctgtttttgtaccaataccccgcagttttataactattgcttt
gtaatacaacttgcgatcagaattttcgggagatcagagatgattcttct
cgaaattcttttattattcaggattgttttggctggcttcatttattgtg
tttccatataaatttctctttcaagcaattacattgaatttgtagattgc
ttttggtaagatggccatttttaccatgttaatcctatttatatctataa
gcatgggagagttttccatcttcagatgtcttcttcattttctttcttca
ggatcttgaagttcttatcctgcgatccctgcttggttatagttacatca
agatgtttttataatatccatggctattgtaaaggggtgtttttgcctaa
tttctttcacagtccattatctatggataaggagggctactattactttt
cagttaattttgtatcagccactttgctgagtggtttcacttttggtaag
aacctctttgggggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106315703_106316747
seq2: B6Ng01-232I07.b_46_1089

seq1  GAATTCTCATGTTCTACTATGTAACTCAGGCTGTCTGAGCTGCTGGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGTTCTACTATGTAACTCAGGCTGTCTGAGCTGCTGGAGAA  50

seq1  AACTCTCAGTAGGGAAGTGTACCTGGTTCATTCATGCCTTCCGTGCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCAGTAGGGAAGTGTACCTGGTTCATTCATGCCTTCCGTGCCTCT  100

seq1  GGGATAGTGTTGTTCTTTCACTGACACTCCTCCCACTTTCTATGATTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGTGTTGTTCTTTCACTGACACTCCTCCCACTTTCTATGATTCTT  150

seq1  CTTAGTGAGTTCGTTCTTTTTCCAATCACTCAACATTCATCTTCTGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGAGTTCGTTCTTTTTCCAATCACTCAACATTCATCTTCTGCTTA  200

seq1  TTAGTTTACAATGCATCAAGGAAAGAGATGGAAAGACAGAAAGAAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTACAATGCATCAAGGAAAGAGATGGAAAGACAGAAAGAAAAATA  250

seq1  CCACCAGAAATCTAGACTACTCTACTTATCCAAGATTATTTCTACCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGAAATCTAGACTACTCTACTTATCCAAGATTATTTCTACCTATT  300

seq1  TCCTAGGCCATTTTATGATTAATTATTCCAATCTTACCTCATCTGTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGCCATTTTATGATTAATTATTCCAATCTTACCTCATCTGTGACT  350

seq1  TTAGCAAGGCCAAAAAAATTCTAAGGTTTGCAAGACTAAAAGATACACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAGGCCAAAAAAATTCTAAGGTTTGCAAGACTAAAAGATACACTA  400

seq1  TTAATGCTCAAGAGAGAAGAATTCACAATAAGTTCAAGTGCATGTGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTCAAGAGAGAAGAATTCACAATAAGTTCAAGTGCATGTGTGAT  450

seq1  TTCAAGTGCAATCTTTATTGCACTCATCTATTCCAACTACTACCTACCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGCAATCTTTATTGCACTCATCTATTCCAACTACTACCTACCTA  500

seq1  CGCTTTCCTGAATTTGCTAATGATAAATGAATTAAAGTATTTGTGATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTCCTGAATTTGCTAATGATAAATGAATTAAAGTATTTGTGATTCA  550

seq1  CAAACTTGAACCGCAGGAAGCAAGAGATTTACTGAATGAGCAGCTTCTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTGAACCGCAGGAAGCAAGAGATTTACTGAATGAGCAGCTTCTCG  600

seq1  TCTGAATATTCAAATCTAAACTTGGCTGGTTTAAAAATTAAAAAACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATTCAAATCTAAACTTGGCTGGTTTAAAAATTAAAAAACAGAG  650

seq1  GTCCTAACTTTTAGCAGACTGTATAGACTCCATTGGGTCAATTGAAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAACTTTTAGCAGACTGTATAGACTCCATTGGGTCAATTGAAAAGG  700

seq1  TTAGTCTCCACTATTTGAATTAACACACCACACACACACACAAACCGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTCCACTATTTGAATTAACACACCACACACACACACAAACCGCAA  750

seq1  AGACACACAAACACACACACATAGACACAAAGATACACACAAACACAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACAAACACACACACATAGACACAAAGATACACACAAACACAGAG  800

seq1  ATAAAAATAAAACATGCAAACGCACAGACACACATACAAACTCACACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAAAACATGCAAACGCACAGACACACATACAAACTCACACATA  850

seq1  TACACACAAACACAGAGATACAAATAAAACACATGGAAACACACAGACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACAAACACAGAGATACAAATAAAACACATGGAAACACACAGACAC  900

seq1  ACATACAAACTCACACATATACACACAGAGATACACACAAACACACACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAAACTCACACATATACACACAGAGATACACACAAACACACACAG  950

seq1  ACATTCACACACAAGGACACAGAAAAAATACA-CACAGAGAAACACACAG  999
      |||||||||||| ||||||||||||||||||| ||||||| |||||||||
seq2  ACATTCACACAC-AGGACACAGAAAAAATACACCACAGAG-AACACACAG  998

seq1  ACATGCACGCAACACA-CACACACATACACACACACACACACACACA  1045
      |||||||||| ||||| |||||||||||||| |||||||||||||||
seq2  ACATGCACGC-ACACACCACACACATACACAGACACACACACACACA  1044


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