BAC Information

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BAC

Clone NameB6Ng01-232K11
Chromosome10 (Build37)
Map Location 35,374,226 - 35,375,295
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667824
Downstream geneLOC100041585, LOC667860, Hs3st5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232K11.bB6Ng01-232K11.g
ACCGA044934GA044935
length1,1671,073
definitionB6Ng01-232K11.b B6Ng01-232K11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcccctgaggaatactgaatggctgggaagcatctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaagcaaccctgagat
tctaccccacaccagtcagattggctaagataaaaaattcagttgccagc
agatgctggttagtttgtggagaaagaggaacaatcctccattgttggtg
gtattgcaagcttgtaccaccactttggaaatctgtctgaaaattggaca
taatactaccggaggatcccgcaatacctctctgagcatatatccagaag
atgttctaactggtcagaaggatacatgctctactatgttcatagcagcc
ttatttataatagcctgaagctggaaagaacccagatgcccctcaacaga
ggaatggatacagaaaatgtggtacatttacaaagtggagtactactcag
ctattaaaaggaatgaattcatgaaattcctaggcaaatgaatgaacgtg
gagggcatcatccttattgaggtaacacaatcacaaaagaactcacatga
tatgtactcactgataagtggatattatcccataaacttcgaatacccaa
gatactagataaaatttgcaaaacacatgaaactcaagaagaataaagac
caaagtttggacactttgccccttcttagaattgggaacaaaacactcat
ggaaggagttacagagacaaagtttggagctgagacaaaaggatggacca
tctagagactgccatacccagggatccatcccataatcagcttccaaacg
ctgacaccattacatacactagcaagattttgctgaaagtaccgtgatct
agctgtctcttgtgaggctattcttgggcctagcaaacacagaagtagat
gctcacagttagctattggatggaacacaggcccccaacggaggagtaga
ggaagtacccaaggagctaaagggatctgcaaccctataggtggaacaac
atatgaactatcagtaaccctggagctcgtgtctctatctgcatatgtat
cagaagatggcccagttgtcaacagtgaaaagagagtccatgtctgcaac
tttattatgctcagtacagggaacaaccaggccaaagattggggaagtgg
ggggagggggagaagtt

gaattcagcagatggaaacttggtaaaaagtcaactgtaagtcagatgga
gtagatttcaccgaaggccacactatttatggactgaatgttcatttcaa
gggtgtttgtgaggacttaagagaatatcttgtaaatttccaagtgacaa
tgatgcatcacctctgactctgctatacctgtgtttgtttggttttccag
ctcatctgcaagggactttctccagtgtgtgcagtgcctctgttattttc
atcacttcctggggatgtttcctttgtgcttcaagtgtgatccactacca
tgctatatgctctgtttattgcaaagctaaacaaagcatgcctaggagca
tctgaaaacaattaaaaagtaattgaaatgagctctggtctctactaaac
tcattaaggtttttatttcatcctccacactttggggagattcaaatctg
acccttctatcccactggccccctgctggcttgagagatcccttgccaga
ggcagaaaaaggaccatcagattctgtacagagagtgttctccaaatgac
caggcagggaaaagtcctgatggctgccaagaggcttcagtgggagggag
gcatctctctgctttctgcctttgagcagctgctctatgaattaataaac
atcactgtggatacacacacattcttattaagaattcacaagcacattaa
tcaggccactctcatgcaactcaggaaattaaagttagcttttctcttgc
attttttttcctgggaaaagtcagagacaacattagaatgagaaagaaag
aaaggaagaaagaaaaaacttgctgaaaggacagaaacaaggaaatggac
agatttcgacactttcaacaaagaaagtttgaaatcagtccaagtaagac
aatattttacaatgttctcagggttttaaatcaaaatacatagtacctta
aatatattaaaaatgtacagcaccccgttgatgatgcaattatgtcaaaa
tatcaggcaatatttttaatatgactattaacataagttattacgagacc
tcactttcccctgccccatgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35374226_35375295
seq2: B6Ng01-232K11.g_67_1139

seq1  GAATTCAGCAGATGGAAACTTGGTAAAAAGTCAACTGTAAGTCAGATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGATGGAAACTTGGTAAAAAGTCAACTGTAAGTCAGATGGA  50

seq1  GTAGATTTCACCGAAGGCCACACTATTTATGGACTGAATGTTCATTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTTCACCGAAGGCCACACTATTTATGGACTGAATGTTCATTTCAA  100

seq1  GGGTGTTTGTGAGGACTTAAGAGAATATCTTGTAAATTTCCAAGTGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTTGTGAGGACTTAAGAGAATATCTTGTAAATTTCCAAGTGACAA  150

seq1  TGATGCATCACCTCTGACTCTGCTATACCTGTGTTTGTTTGGTTTTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCATCACCTCTGACTCTGCTATACCTGTGTTTGTTTGGTTTTCCAG  200

seq1  CTCATCTGCAAGGGACTTTCTCCAGTGTGTGCAGTGCCTCTGTTATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGCAAGGGACTTTCTCCAGTGTGTGCAGTGCCTCTGTTATTTTC  250

seq1  ATCACTTCCTGGGGATGTTTCCTTTGTGCTTCAAGTGTGATCCACTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTCCTGGGGATGTTTCCTTTGTGCTTCAAGTGTGATCCACTACCA  300

seq1  TGCTATATGCTCTGTTTATTGCAAAGCTAAACAAAGCATGCCTAGGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATGCTCTGTTTATTGCAAAGCTAAACAAAGCATGCCTAGGAGCA  350

seq1  TCTGAAAACAATTAAAAAGTAATTGAAATGAGCTCTGGTCTCTACTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAACAATTAAAAAGTAATTGAAATGAGCTCTGGTCTCTACTAAAC  400

seq1  TCATTAAGGTTTTTATTTCATCCTCCACACTTTGGGGAGATTCAAATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAGGTTTTTATTTCATCCTCCACACTTTGGGGAGATTCAAATCTG  450

seq1  ACCCTTCTATCCCACTGGCCCCCTGCTGGCTTGAGAGATCCCTTGCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTATCCCACTGGCCCCCTGCTGGCTTGAGAGATCCCTTGCCAGA  500

seq1  GGCAGAAAAAGGACCATCAGATTCTGTACAGAGAGTGTTCTCCAAATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAAAAGGACCATCAGATTCTGTACAGAGAGTGTTCTCCAAATGAC  550

seq1  CAGGCAGGGAAAAGTCCTGATGGCTGCCAAGAGGCTTCAGTGGGAGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGGAAAAGTCCTGATGGCTGCCAAGAGGCTTCAGTGGGAGGGAG  600

seq1  GCATCTCTCTGCTTTCTGCCTTTGAGCAGCTGCTCTATGAATTAATAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTCTGCTTTCTGCCTTTGAGCAGCTGCTCTATGAATTAATAAAC  650

seq1  ATCACTGTGGATACACACACATTCTTATTAAGAATTCACAAGCACATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGTGGATACACACACATTCTTATTAAGAATTCACAAGCACATTAA  700

seq1  TCAGGCCACTCTCATGCAACTCAGGAAATTAAAGTTAGCTTTTCTCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCACTCTCATGCAACTCAGGAAATTAAAGTTAGCTTTTCTCTTGC  750

seq1  ATTTTTTTTCCTGGGAAAAGTCAGAGACAACATTAGAATGAGAAAGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTCCTGGGAAAAGTCAGAGACAACATTAGAATGAGAAAGAAAG  800

seq1  AAAGGAAGAAAGAAAAAACTTGCTGAAAGGACAGAAACAAGGAAATGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGAAAGAAAAAACTTGCTGAAAGGACAGAAACAAGGAAATGGAC  850

seq1  AGATTTCGACACTTTCAACAAAGAAAGTTTGAAATCAGTCCAAGTAAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCGACACTTTCAACAAAGAAAGTTTGAAATCAGTCCAAGTAAGAC  900

seq1  AATA-TTTACAATGTTCTCAGGGTTTTAAATCAAAATAACATAGTACCTT  949
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATATTTTACAATGTTCTCAGGGTTTTAAATCAAAAT-ACATAGTACCTT  949

seq1  AAATATATTAAAAATGTACAGCAACCCCGTTGATGATGCAATTATGTCAA  999
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAATATATTAAAAATGTACAGC-ACCCCGTTGATGATGCAATTATGTCAA  998

seq1  AATATCAGGCAATATTTTT-ATATGACTATAACAATAAG-TATTACGAGA  1047
      ||||||||||||||||||| |||||||||| |  ||||| ||||||||||
seq2  AATATCAGGCAATATTTTTAATATGACTATTAACATAAGTTATTACGAGA  1048

seq1  -CTCAC-TTCCCCTGCCCCATGAGT  1070
       ||||| ||||||||||||||||||
seq2  CCTCACTTTCCCCTGCCCCATGAGT  1073


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