BAC Information

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BAC

Clone NameB6Ng01-232L05
Chromosome10 (Build37)
Map Location 26,483,944 - 26,485,136
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349
Downstream geneArhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232L05.bB6Ng01-232L05.g
ACCGA044967GA044968
length1,1521,186
definitionB6Ng01-232L05.b B6Ng01-232L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccttaaagagatagccccgctggccatctatcccttgcttcag
ggaagatgagcggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgttttttgtgtttggcacatgtgttaggtgcagagtgtgcggcccgc
actttcgccatggtagcgtaggcttttgctgcagtggaggcgggacaatc
tcctcagattcggtttgccgctctaaaagaaattatgctgcgttatgccg
tggggtgcgaggctaagcactgcacagaggatagctgctgttggcatcct
gtggaaggcatgtctgattgcatgaagggtcagtgtcctagttcccttcc
cccaggaaaaatgacacgggagctggccaagacctctctgggtgatgagc
ctaagggatggttttgtgtagggcccctatgcttgcacactggggatcag
acctctaccttcacccatgaggcttgcttgcagcgattaagatctggcca
tagattaatcaacatcctggccttttgatgcacctgccgcaagcaaaaca
caatctccccaggagtggcttggcatgactgagaggtagtcagtgataag
actccctgggcatgtcaccaacctaagacagggatcaaaccaatgctgtt
tgtcacccaaggacgggtaaggggcatggctgcggggggctatctacaga
cattctctctgccaaaaaagaaaaaagggggaattgtggggagcgggtgt
ggcggcagtcccaaaggcgccagagactgtagctaagtcgtatgacttgc
acctgacttcctcatataagacacaaacatcttgagagctgcacaggtgt
accaggatacaggtgaatccattttgatggagatatgcccctgctgccct
gattagctgaagcctcgtgactggtgaggtggcgtggcctgctgtgcgtg
gatgggaactgagagtataaaagagtgagaggccaggattcggggggaga
tataaacaggggagatataaaacaggagagattataacaggggagaatat
aaaacatggagaattaatcagggagattaaaacatgcagattaacaagga
gaatattgcgaaagagaaacgacttgaatatggtgcagaggaatctgtat
ag
gaattcaggacctctggaagagcagtcagtgctcttaactgctgagccat
ctctccagcccattttgtgagtcttattggaagcacagaataagaaaggt
cttcagaaatagtgacgtaatatattagaatttaaaacatcctacacagt
gtgctggagggatggctcagcagttaagagaatcaaaaggtctgttcagt
tcccagcacccacatcagacaggtcacaacttcctggaactctggcttct
gatggcccctacacgcaaatgtaggtattcatatagagacacacgcacat
actataatgagaagaatctttttaaagatgtaaaagatgcagatcatgca
gccttgttttacaaaatcaggagccttaccagccaaccgaggatggctct
tgaagcactgaatggatttgtcgtgaagcccacagtccataggagagaat
tttgtgctgatgtacgtgacagcactctctccatgtctcttcaaacaaat
atctgaaaacacttcttcaggcttgttcagctcaggagaaattaattctt
ggctccccaatatgacttccactctggttcttgaaggattctagatagac
ctgccttcacataggcccatctgaatccagcaaggctagtcaaagcactc
tgaacttcctctgcttacacagtgccctgaaaaccagggtttatagaact
aattgctaccaaaataaaagtaaaaatgtttcataaataaaaatcaagtt
ttagtgtgcatgtgttaagtatttccttgaaaataactgttaattgcttt
ttaaatatggtacatacatttaagtccttgagaaaattcggtattgtggc
aaagactttcagttaccaagaacctattaagttgactcatccatcaatag
cagcgtagaatcacagaaaacaaacttctattctgcaaaattttggtata
attagttttccattgaatttatgtcttgtattattgggctatatattctt
gtgaaataattttcaggaaaactagtgaattacctacaacatttcagaaa
tacattccgtttaagagttcaatgtttccacattgaaacagaagtgtcat
tctaccagtgccatgcctaggactttacagtcacttcataaatcacattg
caccataggtttaaggctcaccttaaaattggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26483944_26485136
seq2: B6Ng01-232L05.g_67_1252 (reverse)

seq1  AACACAAAATTTTAAGGTGA--CTTAAAACTATATGGGTGCATGTGTGAT  48
      |||||  |||||||||||||  |||||| ||||   ||||||  ||||| 
seq2  AACAC-CAATTTTAAGGTGAGCCTTAAACCTAT---GGTGCA-ATGTGA-  44

seq1  TTTTTTAAGTGAATTGTAAAGTTCTTAAGCAT-GCACTTTGTAG-ATGAC  96
      ||| | ||||| | ||||||| || || |||| |||| | |||| |||||
seq2  TTTATGAAGTG-ACTGTAAAG-TCCTAGGCATGGCAC-TGGTAGAATGAC  91

seq1  AACTTCTGTTTCCATGT-GAAACATTGAACTCTTAAACGAATTGTA-TTC  144
       ||||||||||| |||| ||||||||||||||||||||| | |||| |||
seq2  -ACTTCTGTTTCAATGTGGAAACATTGAACTCTTAAACGGAATGTATTTC  140

seq1  TG-AATGTTGTAAGTAATTCACTAGTTTTCCTGAAAATTATTTTCACAAA  193
      || ||||||||| ||||||||||||||||||||||||||| |||||| ||
seq2  TGAAATGTTGTAGGTAATTCACTAGTTTTCCTGAAAATTA-TTTCAC-AA  188

seq1  GAATATATAG-CCAATAATACAAAGACATAAATTCAATGGAAAACTAATT  242
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  GAATATATAGCCCAATAATAC-AAGACATAAATTCAATGGAAAACTAATT  237

seq1  ATACCAAAATTTTGCAGAAATAGAAGTTTGTTTTCTGTGATTCTACGCTG  292
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATACCAAAATTTTGCAG-AATAGAAGTTTGTTTTCTGTGATTCTACGCTG  286

seq1  CTATTGATGGATGAGTCAACTTTAATAGGTTCTTGGTAACTGAAAGTCTT  342
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTATTGATGGATGAGTCAAC-TTAATAGGTTCTTGGTAACTGAAAGTCTT  335

seq1  TGCCACAATACCGAATTTTCTCAAGGACTTAAATGTATGTACCATATTTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAATACCGAATTTTCTCAAGGACTTAAATGTATGTACCATATTTA  385

seq1  AAAAGCAATTAACAGTTATTTTCAAGGAAATACTTAACACATGCACACTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAATTAACAGTTATTTTCAAGGAAATACTTAACACATGCACACTA  435

seq1  AAACTTGATTTTTATTTATGAAACATTTTTACTTTTATTTTGGTAGCAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGATTTTTATTTATGAAACATTTTTACTTTTATTTTGGTAGCAAT  485

seq1  TAGTTCTATAAACCCTGGTTTTCAGGGCACTGTGTAAGCAGAGGAAGTTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTATAAACCCTGGTTTTCAGGGCACTGTGTAAGCAGAGGAAGTTC  535

seq1  AGAGTGCTTTGACTAGCCTTGCTGGATTCAGATGGGCCTATGTGAAGGCA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCTTTGACTAGCCTTGCTGGATTCAGATGGGCCTATGTGAAGGCA  585

seq1  GGTCTATCTAGAATCCTTCAAGAACCAGAGTGGAAGTCATATTGGGGAGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATCTAGAATCCTTCAAGAACCAGAGTGGAAGTCATATTGGGGAGC  635

seq1  CAAGAATTAATTTCTCCTGAGCTGAACAAGCCTGAAGAAGTGTTTTCAGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTAATTTCTCCTGAGCTGAACAAGCCTGAAGAAGTGTTTTCAGA  685

seq1  TATTTGTTTGAAGAGACATGGAGAGAGTGCTGTCACGTACATCAGCACAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTGAAGAGACATGGAGAGAGTGCTGTCACGTACATCAGCACAA  735

seq1  AATTCTCTCCTATGGACTGTGGGCTTCACGACAAATCCATTCAGTGCTTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTCCTATGGACTGTGGGCTTCACGACAAATCCATTCAGTGCTTC  785

seq1  AAGAGCCATCCTCGGTTGGCTGGTAAGGCTCCTGATTTTGTAAAACAAGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCATCCTCGGTTGGCTGGTAAGGCTCCTGATTTTGTAAAACAAGG  835

seq1  CTGCATGATCTGCATCTTTTACATCTTTAAAAAGATTCTTCTCATTATAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGATCTGCATCTTTTACATCTTTAAAAAGATTCTTCTCATTATAG  885

seq1  TATGTGCGTGTGTCTCTATATGAATACCTACATTTGCGTGTAGGGGCCAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCGTGTGTCTCTATATGAATACCTACATTTGCGTGTAGGGGCCAT  935

seq1  CAGAAGCCAGAGTTCCAGGAAGTTGTGACCTGTCTGATGTGGGTGCTGGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCAGAGTTCCAGGAAGTTGTGACCTGTCTGATGTGGGTGCTGGG  985

seq1  AACTGAACAGACCTTTTGATTCTCTTAACTGCTGAGCCATCCCTCCAGCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACAGACCTTTTGATTCTCTTAACTGCTGAGCCATCCCTCCAGCA  1035

seq1  CACTGTGTAGGATGTTTTAAATTCTAATATATTACGTCACTATTTCTGAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTAGGATGTTTTAAATTCTAATATATTACGTCACTATTTCTGAA  1085

seq1  GACCTTTCTTATTCTGTGCTTCCAATAAGACTCACAAAATGGGCTGGAGA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTCTTATTCTGTGCTTCCAATAAGACTCACAAAATGGGCTGGAGA  1135

seq1  GATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAATT  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAATT  1185

seq1  C  1193
      |
seq2  C  1186